NZ_CP0075151..190889

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 190889 bp
Accession: NZ_CP007515        Location: 1..190889         Organism: Rubrobacter radiotolerans strain RSPS-4       Replicon: plasmid 1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
RRADSPS_RS13990 () 7..258 + 252 WP_041338784.1 CRISPR-associated endonuclease Cas2 -
RRADSPS_RS13995 () 251..832 + 582 WP_041338466.1 CRISPR-associated protein Cas4 -
RRADSPS_RS14000 () 847..1704 + 858 WP_041338469.1 type I-A CRISPR-associated protein Cas4/Csa1 -
RRADSPS_RS14005 () 1748..2011 + 264 WP_041338473.1 ribbon-helix-helix protein, CopG family -
RRADSPS_RS14010 () 2008..2436 + 429 WP_051589992.1 type II toxin-antitoxin system VapC family toxin -
RRADSPS_RS14015 () 2555..4432 + 1878 WP_084264125.1 DEAD/DEAH box helicase -
RRADSPS_RS14020 () 4432..5373 + 942 WP_041338478.1 hypothetical protein -
RRADSPS_RS14025 () 5351..7417 + 2067 WP_041338480.1 hypothetical protein -
RRADSPS_RS14030 () 7730..8929 + 1200 WP_198024605.1 type I-D CRISPR-associated protein Cas7/Csc2 -
RRADSPS_RS14035 () 8929..9723 + 795 WP_041338486.1 hypothetical protein -
RRADSPS_RS14040 () 9779..10945 + 1167 WP_041338489.1 TIGR02710 family CRISPR-associated protein -
RRADSPS_RS14045 () 10947..11897 + 951 WP_051589993.1 CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6 -
RRADSPS_RS14050 () 12108..13763 - 1656 WP_041338493.1 FAD-binding dehydrogenase -
RRADSPS_RS14055 () 14230..15507 + 1278 WP_143533761.1 pyridoxal phosphate-dependent aminotransferase family protein -
RRADSPS_RS14060 () 15500..16642 + 1143 WP_051589994.1 hypothetical protein -
RRADSPS_RS14065 () 16677..17597 + 921 WP_041338496.1 NAD(P)-dependent oxidoreductase -
RRADSPS_RS14070 () 17948..19822 + 1875 WP_084264158.1 LTA synthase family protein -
RRADSPS_RS14075 () 20050..20478 + 429 WP_084264128.1 small multi-drug export protein -
RRADSPS_RS14080 () 20673..21155 + 483 WP_041338505.1 SRPBCC family protein -
RRADSPS_RS14085 () 21292..21531 - 240 WP_041338507.1 hypothetical protein -
RRADSPS_RS14090 () 21557..22825 - 1269 WP_084264129.1 FAD-dependent oxidoreductase -
RRADSPS_RS14095 () 22906..23145 - 240 WP_143533779.1 DUF2892 domain-containing protein -
RRADSPS_RS14100 () 23332..25332 - 2001 WP_051589996.1 FAD-binding monooxygenase -
RRADSPS_RS14105 () 25591..26475 + 885 WP_041338513.1 LysR family transcriptional regulator -
RRADSPS_RS14110 () 26553..26852 + 300 WP_051589997.1 type II toxin-antitoxin system VapC family toxin -
RRADSPS_RS14115 () 26869..27219 - 351 WP_051589998.1 hypothetical protein -
RRADSPS_RS14120 () 27624..28229 + 606 WP_084264130.1 TetR/AcrR family transcriptional regulator -
RRADSPS_RS14125 () 28226..29428 + 1203 WP_051590000.1 MFS transporter -
RRADSPS_RS17070 () 29884..30564 + 681 WP_159449854.1 sigma-70 family RNA polymerase sigma factor -
RRADSPS_RS14135 () 30750..31043 + 294 WP_041338519.1 hypothetical protein -
RRADSPS_RS14140 () 31444..32214 + 771 WP_051590002.1 YqhA family protein -
RRADSPS_RS14145 () 32177..32950 - 774 WP_041338522.1 alpha/beta fold hydrolase -
RRADSPS_RS17480 () 33001..33213 + 213 WP_156947982.1 hypothetical protein -
RRADSPS_RS14150 () 33458..36193 + 2736 WP_084264133.1 AMP-binding protein -
RRADSPS_RS14155 () 36190..36462 + 273 WP_041338525.1 hypothetical protein -
RRADSPS_RS14160 () 36789..38120 + 1332 WP_084264134.1 MFS transporter -
RRADSPS_RS14165 () 38418..39080 + 663 WP_041338532.1 hypothetical protein -
RRADSPS_RS14170 () 39278..39682 + 405 WP_051590004.1 hypothetical protein -
RRADSPS_RS14175 () 39906..40205 - 300 WP_041338535.1 DUF1622 domain-containing protein -
RRADSPS_RS14180 () 40214..40588 - 375 WP_041338538.1 DUF1622 domain-containing protein -
RRADSPS_RS14185 () 40800..41360 - 561 WP_041338541.1 dihydrofolate reductase family protein -
RRADSPS_RS14190 () 41916..43289 + 1374 WP_041338545.1 selenium-binding family protein -
RRADSPS_RS14195 () 43401..43694 + 294 WP_041338548.1 hypothetical protein -
RRADSPS_RS14200 () 43937..44845 - 909 WP_198024606.1 helix-turn-helix domain-containing protein -
RRADSPS_RS14205 () 44976..45470 - 495 WP_041338554.1 PucR family transcriptional regulator ligand-binding domain-containing protein -
RRADSPS_RS14210 () 45683..47197 + 1515 WP_041338557.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase -
RRADSPS_RS14215 () 47244..48392 + 1149 WP_041338561.1 alanine dehydrogenase -
RRADSPS_RS14220 () 48389..49759 + 1371 WP_041338564.1 aspartate aminotransferase family protein -
RRADSPS_RS14225 () 49756..50718 + 963 WP_041338567.1 agmatinase -
RRADSPS_RS14230 () 50761..52330 + 1570 Protein_49 amino acid permease -
RRADSPS_RS14235 () 52430..53134 + 705 WP_041338821.1 SDR family oxidoreductase -
RRADSPS_RS14240 () 53134..53910 + 777 WP_041338570.1 SDR family oxidoreductase -
RRADSPS_RS14245 () 53901..54731 + 831 WP_084264159.1 polysaccharide deacetylase -
RRADSPS_RS14250 () 55116..55718 - 603 WP_156947983.1 GntR family transcriptional regulator -
RRADSPS_RS16625 () 57407..58009 + 603 WP_143533780.1 response regulator transcription factor -
RRADSPS_RS14260 () 58346..59212 - 867 WP_041338831.1 AraC family transcriptional regulator -
RRADSPS_RS16630 () 59521..60192 + 672 WP_051590008.1 DUF2306 domain-containing protein -
RRADSPS_RS14270 () 60421..60951 + 531 WP_051590009.1 class I SAM-dependent methyltransferase -
RRADSPS_RS14275 () 61186..61551 + 366 WP_143533764.1 hypothetical protein -
RRADSPS_RS14280 () 61620..62006 + 387 WP_159449857.1 nuclear transport factor 2 family protein -
RRADSPS_RS14285 () 62248..62727 + 480 WP_051590011.1 hypothetical protein -
RRADSPS_RS14290 () 62835..63308 + 474 WP_051590047.1 hypothetical protein -
RRADSPS_RS14295 () 63429..64073 + 645 WP_041338576.1 dihydrofolate reductase family protein -
RRADSPS_RS17490 () 64262..64489 - 228 WP_156947984.1 hypothetical protein -
RRADSPS_RS14300 () 64544..65488 - 945 WP_084264160.1 tyrosine-type recombinase/integrase -
RRADSPS_RS14305 () 65525..66094 - 570 WP_041338579.1 Uma2 family endonuclease -
RRADSPS_RS14310 () 66315..66605 - 291 WP_041338850.1 HigA family addiction module antidote protein Antitoxin Detail
RRADSPS_RS17080 () 66633..66917 - 285 WP_084264161.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
RRADSPS_RS14315 () 67495..68262 - 768 WP_041338582.1 VOC family protein -
RRADSPS_RS14320 () 68259..69098 - 840 WP_143533781.1 ABC transporter permease -
RRADSPS_RS14325 () 69098..70072 - 975 WP_041338589.1 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein -
RRADSPS_RS14330 () 70158..70943 + 786 WP_041338592.1 TetR/AcrR family transcriptional regulator -
RRADSPS_RS14335 () 71431..71865 - 435 WP_041338595.1 hypothetical protein -
RRADSPS_RS14340 () 71992..72807 - 816 WP_041338598.1 AraC family transcriptional regulator -
RRADSPS_RS14345 () 73108..73290 - 183 WP_041338601.1 hypothetical protein -
RRADSPS_RS17705 () 73352..73531 - 180 WP_198024607.1 hypothetical protein -
RRADSPS_RS14355 () 74096..74758 + 663 WP_051590048.1 TetR family transcriptional regulator -
RRADSPS_RS14360 () 74760..75668 + 909 WP_041338607.1 ABC transporter ATP-binding protein -
RRADSPS_RS14365 () 75684..76427 + 744 WP_041338610.1 ABC transporter permease -
RRADSPS_RS14375 () 76689..77183 + 495 WP_143533766.1 dihydrofolate reductase family protein -
RRADSPS_RS14380 () 77310..77954 - 645 WP_041338616.1 TetR/AcrR family transcriptional regulator -
RRADSPS_RS14385 () 78186..79627 + 1442 Protein_81 DHA2 family efflux MFS transporter permease subunit -
RRADSPS_RS14390 () 79617..80372 + 756 WP_041338619.1 SDR family oxidoreductase -
RRADSPS_RS14395 () 80442..80864 + 423 WP_041338622.1 DoxX family protein -
RRADSPS_RS14400 () 80991..81468 + 478 Protein_84 beta-lactamase family protein -
RRADSPS_RS17090 () 81389..81881 + 493 Protein_85 SMP-30/gluconolactonase/LRE family protein -
RRADSPS_RS14405 () 81915..82703 + 789 WP_051590014.1 alpha/beta hydrolase -
RRADSPS_RS14410 () 82700..83112 + 413 Protein_87 VOC family protein -
RRADSPS_RS16635 () 83187..83660 + 474 WP_051590015.1 VOC family protein -
RRADSPS_RS14420 () 83851..84324 + 474 WP_143533767.1 dihydrofolate reductase family protein -
RRADSPS_RS14425 () 84317..85420 + 1104 WP_051590017.1 serine hydrolase -
RRADSPS_RS14430 () 85611..86174 + 564 WP_041338629.1 dihydrofolate reductase family protein -
RRADSPS_RS14435 () 86328..86669 - 342 WP_041338865.1 DUF1801 domain-containing protein -
RRADSPS_RS14440 () 86807..87598 - 792 WP_051590018.1 NIPSNAP family protein -
RRADSPS_RS14445 () 87743..88750 + 1008 WP_051590019.1 helix-turn-helix domain-containing protein -
RRADSPS_RS17495 () 88933..90096 - 1164 WP_156947985.1 Tn3 family transposase -
RRADSPS_RS14455 () 91952..92836 - 885 WP_084264162.1 tyrosine-type recombinase/integrase -
RRADSPS_RS14460 () 93025..93711 - 687 WP_041338636.1 class I SAM-dependent methyltransferase -
RRADSPS_RS14465 () 93762..94499 - 738 WP_041338639.1 ZIP family metal transporter -
RRADSPS_RS14470 () 94609..96579 - 1971 WP_084264141.1 cadmium-translocating P-type ATPase -
RRADSPS_RS14475 () 96583..96999 - 417 WP_084264163.1 metalloregulator ArsR/SmtB family transcription factor -
RRADSPS_RS14480 () 97218..97508 - 291 WP_051590020.1 glyoxalase/bleomycin resistance/dioxygenase family protein -
RRADSPS_RS14485 () 98037..98615 + 579 WP_051590050.1 helix-turn-helix transcriptional regulator -
RRADSPS_RS16640 () 98862..99572 + 711 WP_051590021.1 DUF998 domain-containing protein -
RRADSPS_RS14495 () 100314..101204 - 891 WP_143533768.1 hypothetical protein -
RRADSPS_RS14500 () 101316..101633 - 318 WP_041338647.1 hypothetical protein -
RRADSPS_RS14505 () 101655..102095 - 441 WP_084264143.1 hypothetical protein -
RRADSPS_RS14510 () 102397..102960 - 564 WP_041338653.1 Uma2 family endonuclease -
RRADSPS_RS14515 () 103195..103464 + 270 WP_041338655.1 hypothetical protein -
RRADSPS_RS14520 () 103686..105188 - 1503 WP_041338658.1 AMP-binding protein -
RRADSPS_RS14525 () 105178..106857 - 1680 WP_051590022.1 isovaleryl-CoA dehydrogenase -
RRADSPS_RS14530 () 106968..107348 - 381 WP_041338661.1 MerR family DNA-binding transcriptional regulator -
RRADSPS_RS14535 () 107624..108292 + 669 WP_041338886.1 ArsR family transcriptional regulator -
RRADSPS_RS14540 () 108547..109818 + 1272 WP_084264164.1 MFS transporter -
RRADSPS_RS14545 () 109936..110466 + 531 WP_041338664.1 hypothetical protein -
RRADSPS_RS14550 () 110463..111791 + 1329 WP_041338668.1 glycoside hydrolase -
RRADSPS_RS14555 () 111870..112682 - 813 WP_041338671.1 PrsW family intramembrane metalloprotease -
RRADSPS_RS14560 () 113085..113630 + 546 WP_051590023.1 PepSY domain-containing protein -
RRADSPS_RS14565 () 113967..114194 - 228 WP_041338674.1 SHOCT domain-containing protein -
RRADSPS_RS14570 () 114233..114841 - 609 WP_143533782.1 DedA family protein -
RRADSPS_RS14575 () 115167..116300 + 1134 WP_041338679.1 VIT1/CCC1 family protein -
RRADSPS_RS16645 () 116411..117871 - 1461 WP_051590024.1 HAMP domain-containing histidine kinase -
RRADSPS_RS14585 () 117877..118554 - 678 WP_041338682.1 response regulator transcription factor -
RRADSPS_RS14590 () 118569..119186 - 618 WP_051590025.1 phosphatase PAP2 family protein -
RRADSPS_RS14595 () 119335..119661 - 327 WP_143533769.1 hypothetical protein -
RRADSPS_RS14600 () 119673..120062 - 390 WP_051590026.1 hypothetical protein -
RRADSPS_RS14605 () 120244..120594 - 351 WP_041338688.1 hypothetical protein -
RRADSPS_RS14610 () 120705..122099 - 1395 WP_051590027.1 alkaline phosphatase family protein -
RRADSPS_RS14615 () 122182..123225 - 1044 WP_041338690.1 flippase-like domain-containing protein -
RRADSPS_RS14620 () 123222..124850 - 1629 WP_041338693.1 DUF2156 domain-containing protein -
RRADSPS_RS14625 () 124990..125880 - 891 WP_041338695.1 prolyl oligopeptidase family serine peptidase -
RRADSPS_RS14630 () 126450..127169 - 720 WP_051590028.1 ABC transporter ATP-binding protein -
RRADSPS_RS14635 () 127286..129139 - 1854 WP_143533770.1 MFS transporter -
RRADSPS_RS17500 () 129153..129602 - 450 WP_051590030.1 MarR family transcriptional regulator -
RRADSPS_RS14645 () 129994..130662 - 669 WP_041338698.1 response regulator transcription factor -
RRADSPS_RS14650 () 130659..131897 - 1239 WP_051590031.1 sensor histidine kinase -
RRADSPS_RS14655 () 132957..133331 + 375 WP_041338701.1 hypothetical protein -
RRADSPS_RS14660 () 133549..134199 + 651 WP_041338703.1 DUF4142 domain-containing protein -
RRADSPS_RS14665 () 134223..136790 + 2568 WP_041338706.1 magnesium-translocating P-type ATPase -
RRADSPS_RS14670 () 137114..137602 - 489 WP_041338709.1 hypothetical protein -
RRADSPS_RS14675 () 138143..140140 - 1998 WP_084264147.1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase -
RRADSPS_RS14680 () 140162..140749 - 588 WP_041338713.1 nucleoside deaminase -
RRADSPS_RS14685 () 141543..143000 - 1458 WP_084264148.1 replication initiator protein A -
RRADSPS_RS14690 () 144931..146088 - 1158 WP_041338718.1 5-(carboxyamino)imidazole ribonucleotide synthase -
RRADSPS_RS14695 () 146085..146615 - 531 WP_051590033.1 5-(carboxyamino)imidazole ribonucleotide mutase -
RRADSPS_RS17505 () 146833..147240 - 408 WP_084362524.1 hypothetical protein -
RRADSPS_RS14705 () 147237..147893 - 657 WP_084264149.1 ParA family protein -
RRADSPS_RS14710 () 149155..150660 - 1506 WP_041338724.1 PucR family transcriptional regulator -
RRADSPS_RS14715 () 150801..152000 + 1200 WP_084264150.1 FAD-binding oxidoreductase -
RRADSPS_RS14730 () 153000..154613 + 1614 WP_051590036.1 sodium:solute symporter family protein -
RRADSPS_RS14735 () 154825..156063 + 1239 WP_041338934.1 Tm-1-like ATP-binding domain-containing protein -
RRADSPS_RS14740 () 156060..156884 + 825 WP_041338729.1 phosphoenolpyruvate hydrolase family protein -
RRADSPS_RS14745 () 156973..157335 - 363 WP_041338732.1 hypothetical protein -
RRADSPS_RS14750 () 157371..160154 - 2784 WP_051590037.1 cation-translocating P-type ATPase -
RRADSPS_RS14755 () 160362..161801 - 1440 WP_051590038.1 V-type ATP synthase subunit B -
RRADSPS_RS14760 () 161798..163549 - 1752 WP_041338734.1 V-type ATP synthase subunit A -
RRADSPS_RS17710 () 163588..163935 - 348 WP_041338735.1 V-type ATP synthase subunit F -
RRADSPS_RS14770 () 163932..165044 - 1113 WP_041338738.1 V-type ATPase subunit -
RRADSPS_RS14775 () 165041..165649 - 609 WP_041338741.1 V-type ATP synthase subunit E -
RRADSPS_RS14780 () 165654..165872 - 219 WP_041338744.1 ATPase -
RRADSPS_RS14785 () 165947..167917 - 1971 WP_041338747.1 hypothetical protein -
RRADSPS_RS14790 () 167920..168264 - 345 WP_041338750.1 hypothetical protein -
RRADSPS_RS14795 () 168261..168926 - 666 WP_041338753.1 V-type ATP synthase subunit D -
RRADSPS_RS16660 () 169113..170573 - 1461 WP_051590039.1 GAF domain-containing protein -
RRADSPS_RS17715 () 170848..171912 + 1065 WP_051590040.1 universal stress protein -
RRADSPS_RS14810 () 171909..172367 + 459 WP_041338756.1 hypothetical protein -
RRADSPS_RS14815 () 172364..172753 - 390 WP_051590041.1 hypothetical protein -
RRADSPS_RS14820 () 172845..173168 - 324 WP_051590042.1 hypothetical protein -
RRADSPS_RS14825 () 173381..173656 - 276 WP_051590043.1 hypothetical protein -
RRADSPS_RS14830 () 173845..174411 + 567 WP_041338758.1 hypothetical protein -
RRADSPS_RS14835 () 174454..176214 + 1761 WP_041338761.1 ABC transporter ATP-binding protein -
RRADSPS_RS14840 () 176211..176984 + 774 WP_041338764.1 energy-coupling factor transporter transmembrane protein EcfT -
RRADSPS_RS17720 () 177813..178262 + 450 WP_051590044.1 Na+/H+ antiporter subunit E -
RRADSPS_RS14850 () 178259..178528 + 270 WP_041338767.1 hypothetical protein -
RRADSPS_RS14855 () 178525..178827 + 303 WP_084264155.1 monovalent cation/H(+) antiporter subunit G -
RRADSPS_RS14860 () 178827..179864 + 1038 WP_051590045.1 DUF4040 domain-containing protein -
RRADSPS_RS14865 () 180100..181887 + 1788 WP_051590046.1 complex I subunit 5 family protein -
RRADSPS_RS14870 () 181988..183484 + 1497 WP_041338773.1 oxidoreductase -
RRADSPS_RS14875 () 183504..185033 + 1530 WP_041338775.1 NADH dehydrogenase -
RRADSPS_RS14880 () 188930..189826 + 897 WP_041338779.1 WYL domain-containing protein -
RRADSPS_RS14885 () 189887..190888 + 1002 WP_041338781.1 CRISPR-associated endonuclease Cas1 -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance