MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 190889 bp
Accession: NZ_CP007515 Location: 1..190889 Organism: Rubrobacter radiotolerans strain RSPS-4 Replicon: plasmid 1
Accession: NZ_CP007515 Location: 1..190889 Organism: Rubrobacter radiotolerans strain RSPS-4 Replicon: plasmid 1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
RRADSPS_RS13990 () | 7..258 | + | 252 | WP_041338784.1 | CRISPR-associated endonuclease Cas2 | - |
RRADSPS_RS13995 () | 251..832 | + | 582 | WP_041338466.1 | CRISPR-associated protein Cas4 | - |
RRADSPS_RS14000 () | 847..1704 | + | 858 | WP_041338469.1 | type I-A CRISPR-associated protein Cas4/Csa1 | - |
RRADSPS_RS14005 () | 1748..2011 | + | 264 | WP_041338473.1 | ribbon-helix-helix protein, CopG family | - |
RRADSPS_RS14010 () | 2008..2436 | + | 429 | WP_051589992.1 | type II toxin-antitoxin system VapC family toxin | - |
RRADSPS_RS14015 () | 2555..4432 | + | 1878 | WP_084264125.1 | DEAD/DEAH box helicase | - |
RRADSPS_RS14020 () | 4432..5373 | + | 942 | WP_041338478.1 | hypothetical protein | - |
RRADSPS_RS14025 () | 5351..7417 | + | 2067 | WP_041338480.1 | hypothetical protein | - |
RRADSPS_RS14030 () | 7730..8929 | + | 1200 | WP_198024605.1 | type I-D CRISPR-associated protein Cas7/Csc2 | - |
RRADSPS_RS14035 () | 8929..9723 | + | 795 | WP_041338486.1 | hypothetical protein | - |
RRADSPS_RS14040 () | 9779..10945 | + | 1167 | WP_041338489.1 | TIGR02710 family CRISPR-associated protein | - |
RRADSPS_RS14045 () | 10947..11897 | + | 951 | WP_051589993.1 | CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6 | - |
RRADSPS_RS14050 () | 12108..13763 | - | 1656 | WP_041338493.1 | FAD-binding dehydrogenase | - |
RRADSPS_RS14055 () | 14230..15507 | + | 1278 | WP_143533761.1 | pyridoxal phosphate-dependent aminotransferase family protein | - |
RRADSPS_RS14060 () | 15500..16642 | + | 1143 | WP_051589994.1 | hypothetical protein | - |
RRADSPS_RS14065 () | 16677..17597 | + | 921 | WP_041338496.1 | NAD(P)-dependent oxidoreductase | - |
RRADSPS_RS14070 () | 17948..19822 | + | 1875 | WP_084264158.1 | LTA synthase family protein | - |
RRADSPS_RS14075 () | 20050..20478 | + | 429 | WP_084264128.1 | small multi-drug export protein | - |
RRADSPS_RS14080 () | 20673..21155 | + | 483 | WP_041338505.1 | SRPBCC family protein | - |
RRADSPS_RS14085 () | 21292..21531 | - | 240 | WP_041338507.1 | hypothetical protein | - |
RRADSPS_RS14090 () | 21557..22825 | - | 1269 | WP_084264129.1 | FAD-dependent oxidoreductase | - |
RRADSPS_RS14095 () | 22906..23145 | - | 240 | WP_143533779.1 | DUF2892 domain-containing protein | - |
RRADSPS_RS14100 () | 23332..25332 | - | 2001 | WP_051589996.1 | FAD-binding monooxygenase | - |
RRADSPS_RS14105 () | 25591..26475 | + | 885 | WP_041338513.1 | LysR family transcriptional regulator | - |
RRADSPS_RS14110 () | 26553..26852 | + | 300 | WP_051589997.1 | type II toxin-antitoxin system VapC family toxin | - |
RRADSPS_RS14115 () | 26869..27219 | - | 351 | WP_051589998.1 | hypothetical protein | - |
RRADSPS_RS14120 () | 27624..28229 | + | 606 | WP_084264130.1 | TetR/AcrR family transcriptional regulator | - |
RRADSPS_RS14125 () | 28226..29428 | + | 1203 | WP_051590000.1 | MFS transporter | - |
RRADSPS_RS17070 () | 29884..30564 | + | 681 | WP_159449854.1 | sigma-70 family RNA polymerase sigma factor | - |
RRADSPS_RS14135 () | 30750..31043 | + | 294 | WP_041338519.1 | hypothetical protein | - |
RRADSPS_RS14140 () | 31444..32214 | + | 771 | WP_051590002.1 | YqhA family protein | - |
RRADSPS_RS14145 () | 32177..32950 | - | 774 | WP_041338522.1 | alpha/beta fold hydrolase | - |
RRADSPS_RS17480 () | 33001..33213 | + | 213 | WP_156947982.1 | hypothetical protein | - |
RRADSPS_RS14150 () | 33458..36193 | + | 2736 | WP_084264133.1 | AMP-binding protein | - |
RRADSPS_RS14155 () | 36190..36462 | + | 273 | WP_041338525.1 | hypothetical protein | - |
RRADSPS_RS14160 () | 36789..38120 | + | 1332 | WP_084264134.1 | MFS transporter | - |
RRADSPS_RS14165 () | 38418..39080 | + | 663 | WP_041338532.1 | hypothetical protein | - |
RRADSPS_RS14170 () | 39278..39682 | + | 405 | WP_051590004.1 | hypothetical protein | - |
RRADSPS_RS14175 () | 39906..40205 | - | 300 | WP_041338535.1 | DUF1622 domain-containing protein | - |
RRADSPS_RS14180 () | 40214..40588 | - | 375 | WP_041338538.1 | DUF1622 domain-containing protein | - |
RRADSPS_RS14185 () | 40800..41360 | - | 561 | WP_041338541.1 | dihydrofolate reductase family protein | - |
RRADSPS_RS14190 () | 41916..43289 | + | 1374 | WP_041338545.1 | selenium-binding family protein | - |
RRADSPS_RS14195 () | 43401..43694 | + | 294 | WP_041338548.1 | hypothetical protein | - |
RRADSPS_RS14200 () | 43937..44845 | - | 909 | WP_198024606.1 | helix-turn-helix domain-containing protein | - |
RRADSPS_RS14205 () | 44976..45470 | - | 495 | WP_041338554.1 | PucR family transcriptional regulator ligand-binding domain-containing protein | - |
RRADSPS_RS14210 () | 45683..47197 | + | 1515 | WP_041338557.1 | CoA-acylating methylmalonate-semialdehyde dehydrogenase | - |
RRADSPS_RS14215 () | 47244..48392 | + | 1149 | WP_041338561.1 | alanine dehydrogenase | - |
RRADSPS_RS14220 () | 48389..49759 | + | 1371 | WP_041338564.1 | aspartate aminotransferase family protein | - |
RRADSPS_RS14225 () | 49756..50718 | + | 963 | WP_041338567.1 | agmatinase | - |
RRADSPS_RS14230 () | 50761..52330 | + | 1570 | Protein_49 | amino acid permease | - |
RRADSPS_RS14235 () | 52430..53134 | + | 705 | WP_041338821.1 | SDR family oxidoreductase | - |
RRADSPS_RS14240 () | 53134..53910 | + | 777 | WP_041338570.1 | SDR family oxidoreductase | - |
RRADSPS_RS14245 () | 53901..54731 | + | 831 | WP_084264159.1 | polysaccharide deacetylase | - |
RRADSPS_RS14250 () | 55116..55718 | - | 603 | WP_156947983.1 | GntR family transcriptional regulator | - |
RRADSPS_RS16625 () | 57407..58009 | + | 603 | WP_143533780.1 | response regulator transcription factor | - |
RRADSPS_RS14260 () | 58346..59212 | - | 867 | WP_041338831.1 | AraC family transcriptional regulator | - |
RRADSPS_RS16630 () | 59521..60192 | + | 672 | WP_051590008.1 | DUF2306 domain-containing protein | - |
RRADSPS_RS14270 () | 60421..60951 | + | 531 | WP_051590009.1 | class I SAM-dependent methyltransferase | - |
RRADSPS_RS14275 () | 61186..61551 | + | 366 | WP_143533764.1 | hypothetical protein | - |
RRADSPS_RS14280 () | 61620..62006 | + | 387 | WP_159449857.1 | nuclear transport factor 2 family protein | - |
RRADSPS_RS14285 () | 62248..62727 | + | 480 | WP_051590011.1 | hypothetical protein | - |
RRADSPS_RS14290 () | 62835..63308 | + | 474 | WP_051590047.1 | hypothetical protein | - |
RRADSPS_RS14295 () | 63429..64073 | + | 645 | WP_041338576.1 | dihydrofolate reductase family protein | - |
RRADSPS_RS17490 () | 64262..64489 | - | 228 | WP_156947984.1 | hypothetical protein | - |
RRADSPS_RS14300 () | 64544..65488 | - | 945 | WP_084264160.1 | tyrosine-type recombinase/integrase | - |
RRADSPS_RS14305 () | 65525..66094 | - | 570 | WP_041338579.1 | Uma2 family endonuclease | - |
RRADSPS_RS14310 () | 66315..66605 | - | 291 | WP_041338850.1 | HigA family addiction module antidote protein | Antitoxin Detail |
RRADSPS_RS17080 () | 66633..66917 | - | 285 | WP_084264161.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
RRADSPS_RS14315 () | 67495..68262 | - | 768 | WP_041338582.1 | VOC family protein | - |
RRADSPS_RS14320 () | 68259..69098 | - | 840 | WP_143533781.1 | ABC transporter permease | - |
RRADSPS_RS14325 () | 69098..70072 | - | 975 | WP_041338589.1 | daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein | - |
RRADSPS_RS14330 () | 70158..70943 | + | 786 | WP_041338592.1 | TetR/AcrR family transcriptional regulator | - |
RRADSPS_RS14335 () | 71431..71865 | - | 435 | WP_041338595.1 | hypothetical protein | - |
RRADSPS_RS14340 () | 71992..72807 | - | 816 | WP_041338598.1 | AraC family transcriptional regulator | - |
RRADSPS_RS14345 () | 73108..73290 | - | 183 | WP_041338601.1 | hypothetical protein | - |
RRADSPS_RS17705 () | 73352..73531 | - | 180 | WP_198024607.1 | hypothetical protein | - |
RRADSPS_RS14355 () | 74096..74758 | + | 663 | WP_051590048.1 | TetR family transcriptional regulator | - |
RRADSPS_RS14360 () | 74760..75668 | + | 909 | WP_041338607.1 | ABC transporter ATP-binding protein | - |
RRADSPS_RS14365 () | 75684..76427 | + | 744 | WP_041338610.1 | ABC transporter permease | - |
RRADSPS_RS14375 () | 76689..77183 | + | 495 | WP_143533766.1 | dihydrofolate reductase family protein | - |
RRADSPS_RS14380 () | 77310..77954 | - | 645 | WP_041338616.1 | TetR/AcrR family transcriptional regulator | - |
RRADSPS_RS14385 () | 78186..79627 | + | 1442 | Protein_81 | DHA2 family efflux MFS transporter permease subunit | - |
RRADSPS_RS14390 () | 79617..80372 | + | 756 | WP_041338619.1 | SDR family oxidoreductase | - |
RRADSPS_RS14395 () | 80442..80864 | + | 423 | WP_041338622.1 | DoxX family protein | - |
RRADSPS_RS14400 () | 80991..81468 | + | 478 | Protein_84 | beta-lactamase family protein | - |
RRADSPS_RS17090 () | 81389..81881 | + | 493 | Protein_85 | SMP-30/gluconolactonase/LRE family protein | - |
RRADSPS_RS14405 () | 81915..82703 | + | 789 | WP_051590014.1 | alpha/beta hydrolase | - |
RRADSPS_RS14410 () | 82700..83112 | + | 413 | Protein_87 | VOC family protein | - |
RRADSPS_RS16635 () | 83187..83660 | + | 474 | WP_051590015.1 | VOC family protein | - |
RRADSPS_RS14420 () | 83851..84324 | + | 474 | WP_143533767.1 | dihydrofolate reductase family protein | - |
RRADSPS_RS14425 () | 84317..85420 | + | 1104 | WP_051590017.1 | serine hydrolase | - |
RRADSPS_RS14430 () | 85611..86174 | + | 564 | WP_041338629.1 | dihydrofolate reductase family protein | - |
RRADSPS_RS14435 () | 86328..86669 | - | 342 | WP_041338865.1 | DUF1801 domain-containing protein | - |
RRADSPS_RS14440 () | 86807..87598 | - | 792 | WP_051590018.1 | NIPSNAP family protein | - |
RRADSPS_RS14445 () | 87743..88750 | + | 1008 | WP_051590019.1 | helix-turn-helix domain-containing protein | - |
RRADSPS_RS17495 () | 88933..90096 | - | 1164 | WP_156947985.1 | Tn3 family transposase | - |
RRADSPS_RS14455 () | 91952..92836 | - | 885 | WP_084264162.1 | tyrosine-type recombinase/integrase | - |
RRADSPS_RS14460 () | 93025..93711 | - | 687 | WP_041338636.1 | class I SAM-dependent methyltransferase | - |
RRADSPS_RS14465 () | 93762..94499 | - | 738 | WP_041338639.1 | ZIP family metal transporter | - |
RRADSPS_RS14470 () | 94609..96579 | - | 1971 | WP_084264141.1 | cadmium-translocating P-type ATPase | - |
RRADSPS_RS14475 () | 96583..96999 | - | 417 | WP_084264163.1 | metalloregulator ArsR/SmtB family transcription factor | - |
RRADSPS_RS14480 () | 97218..97508 | - | 291 | WP_051590020.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
RRADSPS_RS14485 () | 98037..98615 | + | 579 | WP_051590050.1 | helix-turn-helix transcriptional regulator | - |
RRADSPS_RS16640 () | 98862..99572 | + | 711 | WP_051590021.1 | DUF998 domain-containing protein | - |
RRADSPS_RS14495 () | 100314..101204 | - | 891 | WP_143533768.1 | hypothetical protein | - |
RRADSPS_RS14500 () | 101316..101633 | - | 318 | WP_041338647.1 | hypothetical protein | - |
RRADSPS_RS14505 () | 101655..102095 | - | 441 | WP_084264143.1 | hypothetical protein | - |
RRADSPS_RS14510 () | 102397..102960 | - | 564 | WP_041338653.1 | Uma2 family endonuclease | - |
RRADSPS_RS14515 () | 103195..103464 | + | 270 | WP_041338655.1 | hypothetical protein | - |
RRADSPS_RS14520 () | 103686..105188 | - | 1503 | WP_041338658.1 | AMP-binding protein | - |
RRADSPS_RS14525 () | 105178..106857 | - | 1680 | WP_051590022.1 | isovaleryl-CoA dehydrogenase | - |
RRADSPS_RS14530 () | 106968..107348 | - | 381 | WP_041338661.1 | MerR family DNA-binding transcriptional regulator | - |
RRADSPS_RS14535 () | 107624..108292 | + | 669 | WP_041338886.1 | ArsR family transcriptional regulator | - |
RRADSPS_RS14540 () | 108547..109818 | + | 1272 | WP_084264164.1 | MFS transporter | - |
RRADSPS_RS14545 () | 109936..110466 | + | 531 | WP_041338664.1 | hypothetical protein | - |
RRADSPS_RS14550 () | 110463..111791 | + | 1329 | WP_041338668.1 | glycoside hydrolase | - |
RRADSPS_RS14555 () | 111870..112682 | - | 813 | WP_041338671.1 | PrsW family intramembrane metalloprotease | - |
RRADSPS_RS14560 () | 113085..113630 | + | 546 | WP_051590023.1 | PepSY domain-containing protein | - |
RRADSPS_RS14565 () | 113967..114194 | - | 228 | WP_041338674.1 | SHOCT domain-containing protein | - |
RRADSPS_RS14570 () | 114233..114841 | - | 609 | WP_143533782.1 | DedA family protein | - |
RRADSPS_RS14575 () | 115167..116300 | + | 1134 | WP_041338679.1 | VIT1/CCC1 family protein | - |
RRADSPS_RS16645 () | 116411..117871 | - | 1461 | WP_051590024.1 | HAMP domain-containing histidine kinase | - |
RRADSPS_RS14585 () | 117877..118554 | - | 678 | WP_041338682.1 | response regulator transcription factor | - |
RRADSPS_RS14590 () | 118569..119186 | - | 618 | WP_051590025.1 | phosphatase PAP2 family protein | - |
RRADSPS_RS14595 () | 119335..119661 | - | 327 | WP_143533769.1 | hypothetical protein | - |
RRADSPS_RS14600 () | 119673..120062 | - | 390 | WP_051590026.1 | hypothetical protein | - |
RRADSPS_RS14605 () | 120244..120594 | - | 351 | WP_041338688.1 | hypothetical protein | - |
RRADSPS_RS14610 () | 120705..122099 | - | 1395 | WP_051590027.1 | alkaline phosphatase family protein | - |
RRADSPS_RS14615 () | 122182..123225 | - | 1044 | WP_041338690.1 | flippase-like domain-containing protein | - |
RRADSPS_RS14620 () | 123222..124850 | - | 1629 | WP_041338693.1 | DUF2156 domain-containing protein | - |
RRADSPS_RS14625 () | 124990..125880 | - | 891 | WP_041338695.1 | prolyl oligopeptidase family serine peptidase | - |
RRADSPS_RS14630 () | 126450..127169 | - | 720 | WP_051590028.1 | ABC transporter ATP-binding protein | - |
RRADSPS_RS14635 () | 127286..129139 | - | 1854 | WP_143533770.1 | MFS transporter | - |
RRADSPS_RS17500 () | 129153..129602 | - | 450 | WP_051590030.1 | MarR family transcriptional regulator | - |
RRADSPS_RS14645 () | 129994..130662 | - | 669 | WP_041338698.1 | response regulator transcription factor | - |
RRADSPS_RS14650 () | 130659..131897 | - | 1239 | WP_051590031.1 | sensor histidine kinase | - |
RRADSPS_RS14655 () | 132957..133331 | + | 375 | WP_041338701.1 | hypothetical protein | - |
RRADSPS_RS14660 () | 133549..134199 | + | 651 | WP_041338703.1 | DUF4142 domain-containing protein | - |
RRADSPS_RS14665 () | 134223..136790 | + | 2568 | WP_041338706.1 | magnesium-translocating P-type ATPase | - |
RRADSPS_RS14670 () | 137114..137602 | - | 489 | WP_041338709.1 | hypothetical protein | - |
RRADSPS_RS14675 () | 138143..140140 | - | 1998 | WP_084264147.1 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | - |
RRADSPS_RS14680 () | 140162..140749 | - | 588 | WP_041338713.1 | nucleoside deaminase | - |
RRADSPS_RS14685 () | 141543..143000 | - | 1458 | WP_084264148.1 | replication initiator protein A | - |
RRADSPS_RS14690 () | 144931..146088 | - | 1158 | WP_041338718.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
RRADSPS_RS14695 () | 146085..146615 | - | 531 | WP_051590033.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
RRADSPS_RS17505 () | 146833..147240 | - | 408 | WP_084362524.1 | hypothetical protein | - |
RRADSPS_RS14705 () | 147237..147893 | - | 657 | WP_084264149.1 | ParA family protein | - |
RRADSPS_RS14710 () | 149155..150660 | - | 1506 | WP_041338724.1 | PucR family transcriptional regulator | - |
RRADSPS_RS14715 () | 150801..152000 | + | 1200 | WP_084264150.1 | FAD-binding oxidoreductase | - |
RRADSPS_RS14730 () | 153000..154613 | + | 1614 | WP_051590036.1 | sodium:solute symporter family protein | - |
RRADSPS_RS14735 () | 154825..156063 | + | 1239 | WP_041338934.1 | Tm-1-like ATP-binding domain-containing protein | - |
RRADSPS_RS14740 () | 156060..156884 | + | 825 | WP_041338729.1 | phosphoenolpyruvate hydrolase family protein | - |
RRADSPS_RS14745 () | 156973..157335 | - | 363 | WP_041338732.1 | hypothetical protein | - |
RRADSPS_RS14750 () | 157371..160154 | - | 2784 | WP_051590037.1 | cation-translocating P-type ATPase | - |
RRADSPS_RS14755 () | 160362..161801 | - | 1440 | WP_051590038.1 | V-type ATP synthase subunit B | - |
RRADSPS_RS14760 () | 161798..163549 | - | 1752 | WP_041338734.1 | V-type ATP synthase subunit A | - |
RRADSPS_RS17710 () | 163588..163935 | - | 348 | WP_041338735.1 | V-type ATP synthase subunit F | - |
RRADSPS_RS14770 () | 163932..165044 | - | 1113 | WP_041338738.1 | V-type ATPase subunit | - |
RRADSPS_RS14775 () | 165041..165649 | - | 609 | WP_041338741.1 | V-type ATP synthase subunit E | - |
RRADSPS_RS14780 () | 165654..165872 | - | 219 | WP_041338744.1 | ATPase | - |
RRADSPS_RS14785 () | 165947..167917 | - | 1971 | WP_041338747.1 | hypothetical protein | - |
RRADSPS_RS14790 () | 167920..168264 | - | 345 | WP_041338750.1 | hypothetical protein | - |
RRADSPS_RS14795 () | 168261..168926 | - | 666 | WP_041338753.1 | V-type ATP synthase subunit D | - |
RRADSPS_RS16660 () | 169113..170573 | - | 1461 | WP_051590039.1 | GAF domain-containing protein | - |
RRADSPS_RS17715 () | 170848..171912 | + | 1065 | WP_051590040.1 | universal stress protein | - |
RRADSPS_RS14810 () | 171909..172367 | + | 459 | WP_041338756.1 | hypothetical protein | - |
RRADSPS_RS14815 () | 172364..172753 | - | 390 | WP_051590041.1 | hypothetical protein | - |
RRADSPS_RS14820 () | 172845..173168 | - | 324 | WP_051590042.1 | hypothetical protein | - |
RRADSPS_RS14825 () | 173381..173656 | - | 276 | WP_051590043.1 | hypothetical protein | - |
RRADSPS_RS14830 () | 173845..174411 | + | 567 | WP_041338758.1 | hypothetical protein | - |
RRADSPS_RS14835 () | 174454..176214 | + | 1761 | WP_041338761.1 | ABC transporter ATP-binding protein | - |
RRADSPS_RS14840 () | 176211..176984 | + | 774 | WP_041338764.1 | energy-coupling factor transporter transmembrane protein EcfT | - |
RRADSPS_RS17720 () | 177813..178262 | + | 450 | WP_051590044.1 | Na+/H+ antiporter subunit E | - |
RRADSPS_RS14850 () | 178259..178528 | + | 270 | WP_041338767.1 | hypothetical protein | - |
RRADSPS_RS14855 () | 178525..178827 | + | 303 | WP_084264155.1 | monovalent cation/H(+) antiporter subunit G | - |
RRADSPS_RS14860 () | 178827..179864 | + | 1038 | WP_051590045.1 | DUF4040 domain-containing protein | - |
RRADSPS_RS14865 () | 180100..181887 | + | 1788 | WP_051590046.1 | complex I subunit 5 family protein | - |
RRADSPS_RS14870 () | 181988..183484 | + | 1497 | WP_041338773.1 | oxidoreductase | - |
RRADSPS_RS14875 () | 183504..185033 | + | 1530 | WP_041338775.1 | NADH dehydrogenase | - |
RRADSPS_RS14880 () | 188930..189826 | + | 897 | WP_041338779.1 | WYL domain-containing protein | - |
RRADSPS_RS14885 () | 189887..190888 | + | 1002 | WP_041338781.1 | CRISPR-associated endonuclease Cas1 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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