MGE detailed information
MGE type: Genomic_island MGE length: 72535 bp
Accession: NZ_CP006834 Location: 642511..715045 Organism: Escherichia coli APEC O2-211 Replicon: chromosome
Accession: NZ_CP006834 Location: 642511..715045 Organism: Escherichia coli APEC O2-211 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APECO2_RS03315 () | 638919..639638 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| APECO2_RS03320 () | 639635..641266 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| APECO2_RS03325 () | 641446..641676 | + | 231 | WP_000371717.1 | (4Fe-4S)-binding protein | - |
| APECO2_RS03330 () | 641688..641960 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| APECO2_RS03340 () | 642187..642483 | + | 297 | WP_001317561.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| APECO2_RS03345 () | 642511..642684 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| APECO2_RS03350 () | 642803..644320 | - | 1518 | WP_000003805.1 | lysine--tRNA ligase | - |
| APECO2_RS03355 () | 644557..646014 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| APECO2_RS03360 () | 646073..648220 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| APECO2_RS03365 () | 648300..649634 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| APECO2_RS03375 () | 650000..651538 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| APECO2_RS03385 () | 652342..653877 | - | 1536 | WP_000492897.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| APECO2_RS03390 () | 653948..654793 | - | 846 | WP_001280513.1 | DUF4942 domain-containing protein | - |
| APECO2_RS03395 () | 654878..655075 | - | 198 | WP_000839254.1 | DUF957 domain-containing protein | - |
| APECO2_RS03400 () | 655087..655575 | - | 489 | WP_000761714.1 | hypothetical protein | - |
| APECO2_RS03405 () | 655572..655949 | - | 378 | WP_001094436.1 | TA system toxin CbtA family protein | Toxin Detail |
| APECO2_RS03410 () | 655996..656373 | - | 378 | WP_015953067.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| APECO2_RS03415 () | 656452..656673 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| APECO2_RS03420 () | 656742..657218 | - | 477 | WP_001186756.1 | RadC family protein | - |
| APECO2_RS03430 () | 657233..657718 | - | 486 | WP_000860054.1 | antirestriction protein | - |
| APECO2_RS03435 () | 657809..658627 | - | 819 | WP_001175142.1 | DUF945 domain-containing protein | - |
| APECO2_RS03440 () | 658717..658950 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| APECO2_RS03445 () | 658956..659633 | - | 678 | WP_001097312.1 | hypothetical protein | - |
| APECO2_RS03450 () | 659781..660461 | - | 681 | WP_001282927.1 | WYL domain-containing protein | - |
| APECO2_RS03455 () | 660664..661548 | - | 885 | WP_000010416.1 | 50S ribosome-binding GTPase | - |
| APECO2_RS03460 () | 661654..662616 | + | 963 | WP_000126799.1 | hypothetical protein | - |
| APECO2_RS03465 () | 662613..663467 | - | 855 | WP_000110727.1 | hypothetical protein | - |
| APECO2_RS27840 () | 665130..665378 | - | 249 | WP_000573211.1 | hypothetical protein | - |
| APECO2_RS03475 () | 665483..666214 | + | 732 | WP_001075462.1 | inovirus Gp2 family protein | - |
| APECO2_RS03485 () | 666724..667176 | + | 453 | WP_001100705.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase | VF |
| APECO2_RS03495 () | 669040..671088 | + | 2049 | WP_000792543.1 | TonB-dependent siderophore receptor IreA | - |
| APECO2_RS03500 () | 671268..672432 | - | 1165 | Protein_625 | IS256 family transposase ISSod4 | Transposase |
| APECO2_RS03505 () | 672470..673683 | + | 1214 | Protein_626 | IS3 family transposase | - |
| APECO2_RS03515 () | 674819..675358 | + | 540 | WP_114637670.1 | inovirus-type Gp2 protein | - |
| APECO2_RS03525 () | 675428..676636 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| APECO2_RS03530 () | 676981..677553 | + | 573 | WP_000991577.1 | hypothetical protein | - |
| APECO2_RS03535 () | 677622..677858 | + | 237 | WP_000958152.1 | AlpA family transcriptional regulator | - |
| APECO2_RS03540 () | 678124..678672 | + | 549 | WP_001167473.1 | hypothetical protein | - |
| APECO2_RS03545 () | 678691..678939 | - | 249 | WP_001349534.1 | osmoprotectant transport activator ProQ | - |
| APECO2_RS03550 () | 679008..679199 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| APECO2_RS03560 () | 679602..680293 | - | 692 | Protein_634 | IS1 family transposase | - |
| APECO2_RS03565 () | 680353..680529 | + | 177 | Protein_635 | transketolase family protein | - |
| APECO2_RS03570 () | 680792..680905 | + | 114 | WP_032346664.1 | transposase | - |
| APECO2_RS03580 () | 681729..682295 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| APECO2_RS03590 () | 682536..683351 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| APECO2_RS03595 () | 683438..683740 | + | 303 | WP_000251875.1 | phosphoglucosamine mutase | - |
| APECO2_RS03605 () | 683916..684572 | - | 657 | Protein_640 | IS91-like element ISVsa3 family transposase | - |
| APECO2_RS03610 () | 684506..684784 | - | 279 | WP_001349530.1 | P fimbrial regulatory protein KS71A | VF |
| APECO2_RS03625 () | 685207..685521 | + | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| APECO2_RS03630 () | 685728..685991 | + | 264 | Protein_643 | Pap fimbrial major pilin protein | VF |
| APECO2_RS03635 () | 686111..687319 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| APECO2_RS03640 () | 687329..687700 | - | 372 | WP_035689358.1 | Transposon Tn10 TetD protein | VF |
| APECO2_RS03645 () | 687833..688426 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| APECO2_RS03650 () | 688539..689744 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| APECO2_RS03655 () | 689826..690449 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| APECO2_RS03660 () | 690427..691113 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| APECO2_RS03665 () | 691121..691507 | - | 387 | WP_000460651.1 | hypothetical protein | - |
| APECO2_RS03670 () | 691500..691820 | - | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| APECO2_RS03675 () | 692264..693469 | + | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| APECO2_RS03680 () | 693700..693819 | + | 120 | Protein_653 | LysR family transcriptional regulator | - |
| APECO2_RS03685 () | 693835..695043 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| APECO2_RS03690 () | 695160..695432 | + | 273 | Protein_655 | fimbrial protein | - |
| APECO2_RS03695 () | 695495..696081 | + | 587 | Protein_656 | type 1 fimbrial protein | - |
| APECO2_RS03700 () | 696140..698650 | + | 2511 | WP_000654934.1 | Outer membrane usher protein PapC | VF |
| APECO2_RS03705 () | 698682..700253 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| APECO2_RS03710 () | 700273..700620 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| APECO2_RS03715 () | 700620..701267 | - | 648 | WP_001774680.1 | IS66 family transposase ISCro1 | Transposase |
| APECO2_RS27845 () | 701335..701841 | + | 507 | WP_047340733.1 | IS3 family transposase ISEcB1 | Transposase |
| APECO2_RS27850 () | 701817..702680 | + | 864 | WP_000935776.1 | IS3 family transposase ISEcB1 | Transposase |
| APECO2_RS03725 () | 702852..703586 | + | 735 | WP_000265730.1 | Chaperone protein PapD | VF |
| APECO2_RS03730 () | 703623..704204 | + | 582 | WP_000261303.1 | hypothetical protein | VF |
| APECO2_RS03735 () | 704214..704750 | + | 537 | WP_000597712.1 | Fimbrial adapter PapK | VF |
| APECO2_RS03740 () | 704777..705298 | + | 522 | WP_047340734.1 | Fimbrial protein PapE | VF |
| APECO2_RS03745 () | 705373..705873 | + | 501 | WP_000620429.1 | Minor fimbrial protein PrsF | VF |
| APECO2_RS03750 () | 705917..706927 | + | 1011 | WP_000758687.1 | Fimbrial adhesin PapG | VF |
| APECO2_RS03760 () | 707287..708033 | + | 747 | WP_001350744.1 | porin family protein | - |
| APECO2_RS03765 () | 708208..709707 | + | 1500 | WP_001026222.1 | phosphoethanolamine transferase | - |
| APECO2_RS03770 () | 709816..713331 | - | 3516 | WP_000344091.1 | ATP-binding protein | - |
| APECO2_RS03780 () | 713783..715045 | - | 1263 | WP_001218820.1 | Prophage integrase IntS ; Integrase | Integrase |
| APECO2_RS03790 () | 715425..716000 | - | 576 | WP_001317578.1 | transcriptional regulator | - |
| APECO2_RS03795 () | 716037..717734 | - | 1698 | WP_047340735.1 | protein-disulfide reductase DsbD | - |
| APECO2_RS03800 () | 717710..718048 | - | 339 | WP_000883405.1 | divalent cation tolerance protein CutA | - |
| APECO2_RS03805 () | 718163..719464 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|