MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 71523 bp
Accession: NZ_CP006747 Location: 1..71523 Organism: Yersinia pestis 8787 Replicon: plasmid pCD1
Accession: NZ_CP006747 Location: 1..71523 Organism: Yersinia pestis 8787 Replicon: plasmid pCD1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M484_RS00750 () | 667..1986 | + | 1320 | WP_011901825.1 | putative ATP synthase YscN | VF |
| M484_RS00755 () | 1983..2447 | + | 465 | WP_002212952.1 | Yop proteins translocation protein O | VF |
| M484_RS00760 () | 2447..3814 | + | 1368 | WP_011901824.1 | hypothetical protein | VF |
| M484_RS00765 () | 3811..4734 | + | 924 | WP_002212948.1 | Yop proteins translocation protein Q | VF |
| M484_RS00770 () | 4731..5384 | + | 654 | WP_002212947.1 | Surface presentation of antigens protein SpaP | VF |
| M484_RS00775 () | 5386..5652 | + | 267 | WP_002212945.1 | hypothetical protein | VF |
| M484_RS00780 () | 5649..6434 | + | 786 | WP_002212938.1 | Surface presentation of antigens protein SpaR | VF |
| M484_RS00785 () | 6434..7498 | + | 1065 | WP_011901823.1 | Yop proteins translocation protein U | VF |
| M484_RS00790 () | 8073..8468 | + | 396 | WP_002222527.1 | Exoenzyme S synthesis protein B | VF |
| M484_RS00795 () | 8592..9407 | + | 816 | WP_002212931.1 | Virulence regulon transcriptional activator VirF | VF |
| M484_RS00800 () | 9486..9584 | + | 99 | WP_002229797.1 | type III secretion system protein YscA | - |
| M484_RS00805 () | 9810..10223 | + | 414 | WP_002212925.1 | Chaperone protein YscB | VF |
| M484_RS00810 () | 10229..12052 | + | 1824 | WP_002212923.1 | Yop proteins translocation protein C | VF |
| M484_RS00815 () | 12049..13308 | + | 1260 | WP_002212919.1 | Yop proteins translocation protein D | VF |
| M484_RS00820 () | 13305..13505 | + | 201 | WP_002212917.1 | Putative Yop proteins translocation protein E | VF |
| M484_RS00825 () | 13506..13769 | + | 264 | WP_002212916.1 | Yop proteins translocation protein F | VF |
| M484_RS00830 () | 13771..14118 | + | 348 | WP_011901822.1 | Putative Yop proteins translocation protein G | VF |
| M484_RS00835 () | 14115..14612 | + | 498 | WP_002212915.1 | Yop proteins translocation protein H | VF |
| M484_RS00840 () | 14613..14960 | + | 348 | WP_002212914.1 | Yop proteins translocation protein I | VF |
| M484_RS00845 () | 14967..15701 | + | 735 | WP_002212912.1 | Yop proteins translocation lipoprotein J | VF |
| M484_RS00850 () | 15701..16330 | + | 630 | WP_002361471.1 | Yop proteins translocation protein K | VF |
| M484_RS00855 () | 16276..16941 | + | 666 | WP_010981371.1 | Yop proteins translocation protein L | VF |
| M484_RS00860 () | 17166..17513 | + | 348 | WP_002212907.1 | Yop proteins translocation protein M | VF |
| M484_RS23520 () | 18061..18922 | + | 862 | Protein_24 | IS3 family transposase | - |
| M484_RS00880 () | 19046..20068 | + | 1023 | WP_011906282.1 | IS21 family transposase IS100kyp | Transposase |
| M484_RS00885 () | 20068..20847 | + | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| M484_RS00890 () | 20913..21050 | + | 138 | Protein_27 | transposase | - |
| M484_RS21840 () | 21069..21341 | + | 273 | Protein_28 | transposase | - |
| M484_RS00895 () | 21562..22968 | - | 1407 | WP_011901819.1 | Tyrosine-protein phosphatase YopH | VF |
| M484_RS00900 () | 23251..23484 | - | 234 | Protein_30 | transposase domain-containing protein | - |
| M484_RS00905 () | 23487..24065 | + | 579 | Protein_31 | IS3 family transposase ISYpe1 | Transposase |
| M484_RS00910 () | 24651..25517 | - | 867 | WP_002213287.1 | Effector protein YopJ | VF |
| M484_RS00915 () | 25913..28111 | - | 2199 | WP_002213290.1 | Protein kinase YpkA | VF |
| M484_RS00920 () | 28129..28557 | - | 429 | WP_002233145.1 | hypothetical protein | VF |
| M484_RS23160 () | 28813..29125 | - | 313 | Protein_35 | IS3 family transposase ISKpn37 | Transposase |
| M484_RS21855 () | 29303..29542 | - | 240 | WP_002213291.1 | hypothetical protein | - |
| M484_RS00930 () | 30715..31593 | - | 879 | WP_002213292.1 | incFII family plasmid replication initiator RepA | - |
| M484_RS00935 () | 31574..31648 | - | 75 | WP_002233140.1 | RepA leader peptide Tap | - |
| M484_RS00940 () | 31890..32144 | - | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| M484_RS00945 () | 32282..32530 | - | 249 | WP_002233137.1 | Phospholipase D | VF |
| M484_RS21865 () | 32656..32964 | + | 309 | Protein_41 | DDE-type integrase/transposase/recombinase | - |
| M484_RS23530 () | 32947..33354 | - | 408 | WP_002213294.1 | IS3 family transposase ISKpn37 | Transposase |
| M484_RS00955 () | 33378..33695 | - | 318 | WP_002213008.1 | IS3 family transposase ISKpn37 | Transposase |
| M484_RS00960 () | 33867..34325 | - | 459 | WP_002213246.1 | hypothetical protein | - |
| M484_RS00965 () | 34394..34663 | + | 270 | WP_042469136.1 | transposase | - |
| M484_RS24220 () | 34761..34919 | - | 159 | Protein_46 | EamA family transporter | - |
| M484_RS21875 () | 34989..36292 | - | 1304 | Protein_47 | Adhesin YadA | VF |
| M484_RS00985 () | 36892..37242 | + | 351 | Protein_48 | IS3 family transposase IS1351 | Transposase |
| M484_RS00990 () | 37275..39590 | - | 2316 | WP_011901828.1 | Tn3 family transposase ISEc63 | Transposase |
| M484_RS00995 () | 39754..40305 | + | 552 | WP_002213258.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| M484_RS01000 () | 40324..40788 | + | 465 | WP_002224338.1 | hypothetical protein | - |
| M484_RS01005 () | 40927..41256 | + | 330 | WP_002229829.1 | hypothetical protein | - |
| M484_RS01015 () | 41356..42455 | + | 1100 | WP_086016640.1 | IS3 family transposase ISYpe1 | Transposase |
| M484_RS01020 () | 42603..43028 | - | 426 | WP_002213267.1 | hypothetical protein | VF |
| M484_RS01025 () | 43405..43803 | - | 399 | Protein_55 | IS21 family transposase IS21 | Transposase |
| M484_RS01030 () | 43803..44975 | - | 1173 | WP_002220893.1 | IS21 family transposase IS21 | Transposase |
| M484_RS01035 () | 45078..45722 | + | 645 | Protein_57 | IS3 family transposase ISYen3 | Transposase |
| M484_RS01040 () | 45785..46177 | - | 393 | WP_002213403.1 | YopE regulator | VF |
| M484_RS01045 () | 46371..47030 | + | 660 | WP_002229754.1 | Outer membrane virulence protein YopE | VF |
| M484_RS01050 () | 47170..47469 | - | 300 | WP_002213360.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M484_RS01055 () | 47462..47704 | - | 243 | WP_002224342.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| M484_RS23170 () | 47870..48162 | - | 293 | Protein_62 | IS6 family transposase ISEas1 | Transposase |
| M484_RS24225 () | 48250..48423 | + | 174 | WP_002213357.1 | hypothetical protein | - |
| M484_RS01060 () | 48878..49843 | - | 966 | WP_002213354.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| M484_RS01065 () | 49840..51006 | - | 1167 | WP_002220902.1 | Sporulation initiation inhibitor protein Soj | VF |
| M484_RS23540 () | 51766..52911 | - | 1146 | Protein_66 | IS3 family transposase | - |
| M484_RS01085 () | 53018..53647 | - | 630 | WP_002229770.1 | hypothetical protein | - |
| M484_RS23180 () | 53793..54086 | - | 294 | Protein_68 | IS3 family transposase | - |
| M484_RS01090 () | 54245..54793 | - | 549 | WP_002213007.1 | hypothetical protein | VF |
| M484_RS21915 () | 55293..56260 | + | 968 | Protein_70 | Cysteine protease YopT | VF |
| M484_RS01105 () | 56260..56658 | + | 399 | WP_002213004.1 | Chaperone protein SycT | VF |
| M484_RS21920 () | 57064..57345 | + | 282 | Protein_72 | DDE-type integrase/transposase/recombinase | - |
| M484_RS01115 () | 57363..57782 | + | 420 | WP_002222515.1 | hypothetical protein | - |
| M484_RS23545 () | 58310..58528 | - | 219 | Protein_74 | IS6 family transposase | - |
| M484_RS23550 () | 58531..58776 | + | 246 | WP_116442925.1 | transposase | - |
| M484_RS01120 () | 58658..58975 | + | 318 | Protein_76 | IS256 family transposase ISSod4 | Transposase |
| M484_RS01125 () | 59018..60247 | - | 1230 | WP_002229779.1 | Outer membrane protein YopM | VF |
| M484_RS01130 () | 60641..60850 | - | 210 | WP_002229781.1 | hypothetical protein | - |
| M484_RS23185 () | 60871..61508 | + | 638 | Protein_79 | IS6 family transposase | - |
| M484_RS01135 () | 61548..62756 | - | 1209 | WP_002209743.1 | IS256 family transposase ISEc39 | Transposase |
| M484_RS01140 () | 63299..64219 | - | 921 | WP_002212987.1 | Protein YopD | VF |
| M484_RS01145 () | 64238..65443 | - | 1206 | WP_002212985.1 | Protein YopB | VF |
| M484_RS01150 () | 65421..65927 | - | 507 | WP_002222758.1 | Chaperone protein IpgC | VF |
| M484_RS01155 () | 65940..66920 | - | 981 | WP_002212981.1 | Virulence-associated V antigen | VF |
| M484_RS01160 () | 66922..67209 | - | 288 | WP_002212973.1 | hypothetical protein | VF |
| M484_RS01165 () | 67251..67691 | - | 441 | WP_002220918.1 | hypothetical protein | VF |
| M484_RS01170 () | 67688..69802 | - | 2115 | WP_002212971.1 | Invasion protein InvA | VF |
| M484_RS01175 () | 69789..70133 | - | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| M484_RS01180 () | 70130..70498 | - | 369 | WP_002212969.1 | Yop proteins translocation protein X | VF |
| M484_RS01185 () | 70495..70866 | - | 372 | WP_002229794.1 | Chaperone protein SycN | VF |
| M484_RS01190 () | 70853..71131 | - | 279 | WP_002212965.1 | Protein TyeA | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|