MGE detailed information
MGE type: Mobilizable plasmid MGE length: 58666 bp
Accession: NZ_CP006264 Location: 1..58666 Organism: Escherichia coli O145:H28 str. RM13516 Replicon: plasmid pRM13516
Accession: NZ_CP006264 Location: 1..58666 Organism: Escherichia coli O145:H28 str. RM13516 Replicon: plasmid pRM13516
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM13516_RS28060 () | 48..554 | - | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
| ECRM13516_RS28065 () | 1632..2660 | + | 1029 | WP_001175209.1 | replication initiation protein | - |
| ECRM13516_RS28075 () | 4068..4229 | + | 162 | WP_001434039.1 | type I toxin-antitoxin system Hok family toxin | - |
| ECRM13516_RS28080 () | 4379..4975 | + | 597 | WP_000125164.1 | hypothetical protein | - |
| ECRM13516_RS33065 () | 4993..5277 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| ECRM13516_RS28090 () | 5351..6016 | - | 666 | WP_000532148.1 | P-loop NTPase | - |
| ECRM13516_RS28095 () | 6614..6943 | + | 330 | WP_000855120.1 | hypothetical protein | - |
| ECRM13516_RS28105 () | 7525..7848 | + | 324 | WP_000432876.1 | hypothetical protein | - |
| ECRM13516_RS28110 () | 7889..8098 | + | 210 | WP_000866037.1 | hypothetical protein | - |
| ECRM13516_RS28115 () | 8196..8420 | + | 225 | WP_000814384.1 | hypothetical protein | - |
| ECRM13516_RS28120 () | 8472..8732 | + | 261 | WP_000702245.1 | hypothetical protein | Toxin Detail |
| ECRM13516_RS28125 () | 8722..8973 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| ECRM13516_RS28130 () | 9523..9801 | + | 279 | WP_025380728.1 | hypothetical protein | - |
| ECRM13516_RS28135 () | 10129..11337 | + | 1209 | WP_051494565.1 | IS200-IS605 family transposase IS609 | Transposase |
| ECRM13516_RS28140 () | 11525..11707 | - | 183 | WP_025380730.1 | hypothetical protein | - |
| ECRM13516_RS28145 () | 12265..12447 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| ECRM13516_RS28150 () | 12472..12909 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| ECRM13516_RS28155 () | 13040..13495 | - | 456 | WP_000206705.1 | hypothetical protein | - |
| ECRM13516_RS28160 () | 13515..14222 | - | 708 | WP_021503228.1 | hypothetical protein | - |
| ECRM13516_RS28165 () | 14224..14976 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| ECRM13516_RS28170 () | 14994..15395 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| ECRM13516_RS28175 () | 15764..16105 | + | 342 | WP_000725934.1 | hypothetical protein | Relaxase |
| ECRM13516_RS28180 () | 16102..19905 | + | 3804 | WP_025380731.1 | relaxase | - |
| ECRM13516_RS32840 () | 19948..20388 | - | 441 | WP_000666087.1 | hypothetical protein | - |
| ECRM13516_RS28190 () | 20633..20887 | - | 255 | WP_024178142.1 | hypothetical protein | - |
| ECRM13516_RS28195 () | 21222..21428 | - | 207 | WP_000850855.1 | hemolysin expression modulator Hha | - |
| ECRM13516_RS28200 () | 21497..23662 | - | 2166 | WP_025380732.1 | type IA DNA topoisomerase | - |
| ECRM13516_RS28205 () | 23667..24242 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| ECRM13516_RS28210 () | 24412..26088 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| ECRM13516_RS28215 () | 26183..26698 | - | 516 | WP_000698398.1 | thermonuclease family protein | - |
| ECRM13516_RS28220 () | 26745..27398 | - | 654 | WP_000572553.1 | hypothetical protein | - |
| ECRM13516_RS28230 () | 27410..28534 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| ECRM13516_RS33070 () | 29126..29434 | + | 309 | WP_192826674.1 | hypothetical protein | - |
| ECRM13516_RS28245 () | 30341..31585 | - | 1245 | Protein_34 | hypothetical protein | VF |
| ECRM13516_RS28250 () | 31598..32233 | - | 636 | WP_025380733.1 | hypothetical protein | VF |
| ECRM13516_RS28255 () | 32237..32719 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| ECRM13516_RS28260 () | 32786..33343 | - | 558 | WP_000095049.1 | hypothetical protein | - |
| ECRM13516_RS28265 () | 33388..34497 | - | 1110 | WP_000974903.1 | hypothetical protein | VF |
| ECRM13516_RS28270 () | 34488..36026 | - | 1539 | WP_000466225.1 | hypothetical protein | VF |
| ECRM13516_RS28275 () | 36051..36545 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| ECRM13516_RS28280 () | 36529..37851 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| ECRM13516_RS28285 () | 37890..39533 | - | 1644 | WP_001035589.1 | Outer membrane lipoprotein BfpB | VF |
| ECRM13516_RS28290 () | 39526..40050 | - | 525 | WP_001401691.1 | sigma 54-interacting transcriptional regulator | - |
| ECRM13516_RS28295 () | 40097..42055 | - | 1959 | WP_000338976.1 | type IV secretory system conjugative DNA transfer family protein | - |
| ECRM13516_RS28300 () | 42071..43126 | - | 1056 | WP_021575850.1 | hypothetical protein | VF |
| ECRM13516_RS28305 () | 43241..44380 | - | 1140 | WP_000790641.1 | hypothetical protein | VF |
| ECRM13516_RS28310 () | 44370..45071 | - | 702 | WP_000274524.1 | hypothetical protein | VF |
| ECRM13516_RS28315 () | 45137..45871 | - | 735 | WP_000432282.1 | hypothetical protein | VF |
| ECRM13516_RS28325 () | 46037..48394 | - | 2358 | WP_000548953.1 | VirB4 family type IV secretion system protein | - |
| ECRM13516_RS28330 () | 48400..48720 | - | 321 | WP_024247125.1 | VirB3 family type IV secretion system protein | - |
| ECRM13516_RS33075 () | 48791..49081 | - | 291 | WP_000865478.1 | hypothetical protein | - |
| ECRM13516_RS28340 () | 49081..49665 | - | 585 | WP_021575848.1 | hypothetical protein | VF |
| ECRM13516_RS28345 () | 49686..50084 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| ECRM13516_RS28350 () | 50203..50640 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| ECRM13516_RS28355 () | 50646..51881 | - | 1236 | WP_021575847.1 | hypothetical protein | VF |
| ECRM13516_RS28360 () | 51884..52171 | - | 288 | WP_001326593.1 | killer family protein | - |
| ECRM13516_RS28365 () | 52343..52978 | - | 636 | WP_000835773.1 | hypothetical protein | - |
| ECRM13516_RS28370 () | 53051..53338 | - | 288 | WP_001032611.1 | EexN family lipoprotein | - |
| ECRM13516_RS28375 () | 53351..53605 | - | 255 | WP_001043555.1 | EexN family lipoprotein | - |
| ECRM13516_RS28380 () | 53607..54248 | - | 642 | WP_001425343.1 | hypothetical protein | VF |
| ECRM13516_RS28385 () | 54254..55249 | - | 996 | WP_001028543.1 | type IV secretion system protein | - |
| ECRM13516_RS28390 () | 55253..55510 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| ECRM13516_RS31045 () | 55507..55809 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| ECRM13516_RS28395 () | 55790..56047 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| ECRM13516_RS28400 () | 56080..56526 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| ECRM13516_RS33080 () | 56537..56707 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| ECRM13516_RS31050 () | 56711..57154 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| ECRM13516_RS28415 () | 57528..58481 | - | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|