MGE detailed information
MGE type: Genomic_island MGE length: 15126 bp
Accession: NZ_CP006262 Location: 4193039..4208164 Organism: Escherichia coli O145:H28 str. RM13516 Replicon: chromosome
Accession: NZ_CP006262 Location: 4193039..4208164 Organism: Escherichia coli O145:H28 str. RM13516 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM13516_RS21370 () | 4189092..4190036 | + | 945 | WP_000947068.1 | nickel ABC transporter permease subunit NikB | - |
| ECRM13516_RS21375 () | 4190033..4190866 | + | 834 | WP_001008970.1 | nickel ABC transporter permease subunit NikC | - |
| ECRM13516_RS21380 () | 4190866..4191630 | + | 765 | WP_001136214.1 | nickel import ATP-binding protein NikD | - |
| ECRM13516_RS21385 () | 4191627..4192433 | + | 807 | WP_000173674.1 | nickel import ATP-binding protein NikE | - |
| ECRM13516_RS21390 () | 4192439..4192840 | + | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| ECRM13516_RS21395 () | 4193039..4193785 | + | 747 | WP_001603991.1 | GntR family transcriptional regulator | - |
| ECRM13516_RS21400 () | 4193810..4194283 | + | 474 | WP_001161553.1 | PTS sugar transporter subunit IIA | - |
| ECRM13516_RS21405 () | 4194280..4194561 | + | 282 | WP_000084022.1 | PTS sugar transporter subunit IIB | - |
| ECRM13516_RS21410 () | 4194638..4195996 | + | 1359 | WP_001308116.1 | PTS galactitol transporter subunit IIC | - |
| ECRM13516_RS21415 () | 4195989..4197497 | + | 1509 | WP_001400448.1 | carbohydrate kinase | - |
| ECRM13516_RS21420 () | 4197487..4197756 | + | 270 | WP_000933061.1 | HPr family phosphocarrier protein | - |
| ECRM13516_RS21425 () | 4197788..4198648 | + | 861 | WP_001131788.1 | class II aldolase | - |
| ECRM13516_RS21430 () | 4198698..4199057 | - | 360 | WP_000593555.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| ECRM13516_RS21435 () | 4199054..4199329 | - | 276 | WP_001259387.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| ECRM13516_RS21440 () | 4199402..4200526 | - | 1125 | WP_025380616.1 | ABC transporter permease | - |
| ECRM13516_RS21445 () | 4200526..4203261 | - | 2736 | WP_000149086.1 | Ribosome-associated ATPase | VF |
| ECRM13516_RS21450 () | 4203258..4204325 | - | 1068 | WP_000361517.1 | HlyD family secretion protein | - |
| ECRM13516_RS21455 () | 4204691..4206313 | - | 1623 | WP_025380617.1 | DUF4049 domain-containing protein | - |
| ECRM13516_RS21460 () | 4206575..4208164 | - | 1590 | WP_025380618.1 | DUF4049 domain-containing protein | - |
| ECRM13516_RS21475 () | 4208547..4209599 | + | 1053 | WP_001028886.1 | DUF2776 domain-containing protein | - |
| ECRM13516_RS21480 () | 4209914..4211116 | - | 1203 | WP_025380619.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| ECRM13516_RS21485 () | 4211348..4212847 | + | 1500 | WP_000902780.1 | inorganic phosphate transporter PitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|