MGE detailed information
MGE type: Mobilizable plasmid MGE length: 87120 bp
Accession: NZ_CP006028 Location: 1..87120 Organism: Escherichia coli O145:H28 str. RM13514 Replicon: plasmid pO145-13514
Accession: NZ_CP006028 Location: 1..87120 Organism: Escherichia coli O145:H28 str. RM13514 Replicon: plasmid pO145-13514
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM13514_RS34060 () | 78..730 | - | 653 | Protein_0 | IS3 family transposase IS629 | Transposase |
| ECRM13514_RS28540 () | 2202..3023 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| ECRM13514_RS28545 () | 3023..4129 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| ECRM13514_RS28550 () | 4223..5944 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| ECRM13514_RS28555 () | 6018..7016 | + | 999 | WP_012680945.1 | Lipid A biosynthesis myristoyltransferase | VF |
| ECRM13514_RS28560 () | 7069..7257 | + | 189 | Protein_5 | hypothetical protein | - |
| ECRM13514_RS28565 () | 7320..8858 | - | 1539 | WP_012917688.1 | IS66 family transposase ISEc8 | Transposase |
| ECRM13514_RS28570 () | 8908..9255 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| ECRM13514_RS28580 () | 9492..9857 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| ECRM13514_RS28585 () | 9857..11044 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| ECRM13514_RS28590 () | 11323..12875 | - | 1553 | Protein_10 | IS66 family transposase ISSfl3 | Transposase |
| ECRM13514_RS28600 () | 12895..13242 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| ECRM13514_RS28605 () | 13239..13913 | - | 675 | WP_025404525.1 | IS66 family transposase ISSfl3 | Transposase |
| ECRM13514_RS32305 () | 13967..14194 | - | 228 | WP_001341442.1 | transposase | - |
| ECRM13514_RS28615 () | 14357..15334 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| ECRM13514_RS28630 () | 16140..17353 | + | 1214 | WP_200870526.1 | IS3 family transposase IS629 | Transposase |
| ECRM13514_RS35130 () | 17393..18026 | + | 634 | Protein_16 | IS3 family transposase | - |
| ECRM13514_RS28645 () | 18106..18501 | - | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| ECRM13514_RS28650 () | 18501..19460 | - | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| ECRM13514_RS28655 () | 19733..20635 | + | 903 | WP_077249722.1 | DUF1281 domain-containing protein | - |
| ECRM13514_RS33380 () | 20632..20943 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| ECRM13514_RS28665 () | 21019..21702 | + | 684 | WP_000086167.1 | DNA methylase | - |
| ECRM13514_RS28670 () | 21702..21920 | + | 219 | WP_001443814.1 | hypothetical protein | - |
| ECRM13514_RS28675 () | 21932..22366 | + | 435 | WP_000274418.1 | DUF1380 family protein | - |
| ECRM13514_RS35135 () | 22411..22650 | + | 240 | Protein_24 | hypothetical protein | - |
| ECRM13514_RS35140 () | 22645..22893 | + | 249 | Protein_25 | conjugation system SOS inhibitor PsiB | - |
| ECRM13514_RS28685 () | 22890..23609 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| ECRM13514_RS35145 () | 23606..24203 | + | 598 | Protein_27 | hypothetical protein | - |
| ECRM13514_RS28700 () | 24665..25165 | + | 501 | WP_000117628.1 | antirestriction protein ArdA | - |
| ECRM13514_RS34875 () | 25167..25787 | - | 621 | WP_162137195.1 | hypothetical protein | - |
| ECRM13514_RS28710 () | 25893..26327 | + | 435 | WP_000218854.1 | hypothetical protein | - |
| ECRM13514_RS28715 () | 26420..26686 | + | 267 | WP_001247865.1 | hypothetical protein | - |
| ECRM13514_RS28720 () | 26751..27641 | + | 891 | WP_000038351.1 | Recombination-promoting nuclease RpnA | VF |
| ECRM13514_RS28725 () | 27641..27886 | + | 246 | WP_012605149.1 | hypothetical protein | - |
| ECRM13514_RS28730 () | 27917..28168 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| ECRM13514_RS35150 () | 28227..28502 | - | 276 | WP_001431784.1 | hypothetical protein | - |
| ECRM13514_RS28735 () | 28747..29595 | + | 849 | WP_001341408.1 | DUF4942 domain-containing protein | - |
| ECRM13514_RS28740 () | 29681..30016 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| ECRM13514_RS28745 () | 30248..30580 | + | 333 | WP_001291056.1 | hypothetical protein | - |
| ECRM13514_RS28750 () | 30592..33312 | + | 2721 | WP_000991402.1 | Protein TraI | Relaxase |
| ECRM13514_RS28755 () | 33533..33853 | - | 321 | WP_001341409.1 | hypothetical protein | - |
| ECRM13514_RS35155 () | 33892..34580 | + | 689 | Protein_41 | IS3 family transposase IS600 | Transposase |
| ECRM13514_RS34085 () | 35833..36246 | + | 414 | WP_136138333.1 | DUF1449 family protein | - |
| ECRM13514_RS28785 () | 36294..36506 | - | 213 | Protein_44 | IS3 family transposase ISSfl10 | Transposase |
| ECRM13514_RS34770 () | 36545..36802 | + | 258 | WP_000112000.1 | hypothetical protein | - |
| ECRM13514_RS28800 () | 37050..40952 | - | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| ECRM13514_RS32330 () | 41395..41568 | - | 174 | Protein_47 | IS66 family transposase | - |
| ECRM13514_RS28805 () | 41630..41842 | + | 213 | Protein_48 | IS3 family transposase ISSfl10 | Transposase |
| ECRM13514_RS34685 () | 41890..42309 | - | 420 | WP_136139077.1 | DUF1449 family protein | - |
| ECRM13514_RS28815 () | 42240..42914 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| ECRM13514_RS28820 () | 42911..43258 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| ECRM13514_RS28830 () | 43278..44830 | + | 1553 | Protein_52 | IS66 family transposase ISSfl3 | Transposase |
| ECRM13514_RS28835 () | 44864..45253 | + | 390 | Protein_53 | IS91 family transposase ISMno23 | Transposase |
| ECRM13514_RS28845 () | 45654..46019 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| ECRM13514_RS28850 () | 46019..47206 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| ECRM13514_RS33395 () | 47797..48820 | + | 1024 | Protein_56 | IS91 family transposase ISEc37 | Transposase |
| ECRM13514_RS33400 () | 49440..50949 | + | 1510 | Protein_57 | ISL3 family transposase | - |
| ECRM13514_RS34100 () | 51000..51114 | - | 115 | Protein_58 | IS3 family transposase | - |
| ECRM13514_RS28880 () | 51201..51587 | + | 387 | Protein_59 | IS66 family transposase ISEc23 | Transposase |
| ECRM13514_RS28890 () | 51658..52810 | + | 1153 | Protein_60 | IS3 family transposase | - |
| ECRM13514_RS32370 () | 52822..54322 | + | 1501 | Protein_61 | IS66 family transposase | - |
| ECRM13514_RS35160 () | 54389..54797 | - | 409 | Protein_62 | IS3 family transposase | - |
| ECRM13514_RS32380 () | 54804..55034 | + | 231 | WP_001443774.1 | transposase | - |
| ECRM13514_RS28920 () | 55149..64649 | + | 9501 | WP_000581688.1 | Toxin B | VF |
| ECRM13514_RS28925 () | 65609..66640 | - | 1032 | WP_000907857.1 | replication initiation protein | - |
| ECRM13514_RS28930 () | 67349..67990 | + | 642 | WP_000335839.1 | transcription termination factor NusG | - |
| ECRM13514_RS28935 () | 68131..68796 | + | 666 | WP_025404528.1 | hypothetical protein | - |
| ECRM13514_RS28940 () | 69063..69422 | + | 360 | Protein_68 | DUF1449 family protein | - |
| ECRM13514_RS28945 () | 69456..71008 | - | 1553 | Protein_69 | IS66 family transposase ISSfl3 | Transposase |
| ECRM13514_RS28955 () | 71028..71375 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| ECRM13514_RS28960 () | 71372..72046 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| ECRM13514_RS28965 () | 72100..72486 | - | 387 | WP_001066949.1 | tyrosine-type recombinase/integrase | - |
| ECRM13514_RS28970 () | 72614..73474 | + | 861 | WP_000704534.1 | putative protein YcjY | VF |
| ECRM13514_RS34775 () | 73963..74238 | + | 276 | WP_157776129.1 | hypothetical protein | - |
| ECRM13514_RS28985 () | 75503..76048 | + | 546 | WP_001165114.1 | hypothetical protein | - |
| ECRM13514_RS28990 () | 76210..76626 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| ECRM13514_RS28995 () | 76623..76853 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| ECRM13514_RS29000 () | 77413..77826 | + | 414 | WP_000465041.1 | hypothetical protein | - |
| ECRM13514_RS29005 () | 77828..78610 | + | 783 | WP_001164205.1 | site-specific integrase | - |
| ECRM13514_RS29010 () | 78783..79136 | + | 354 | WP_000864810.1 | colicin M immunity protein | - |
| ECRM13514_RS34115 () | 79144..79335 | - | 192 | Protein_82 | lipid II-degrading bacteriocin | - |
| ECRM13514_RS34120 () | 79339..79482 | - | 144 | Protein_83 | transcriptional regulator | - |
| ECRM13514_RS29020 () | 79549..80988 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| ECRM13514_RS29025 () | 80992..83112 | - | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| ECRM13514_RS29030 () | 83162..86158 | - | 2997 | WP_000217745.1 | Hemolysin, chromosomal | VF |
| ECRM13514_RS29035 () | 86160..86675 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|