MGE detailed information
MGE type: IS/Tn MGE length: 504 bp
Accession: NZ_CP004057 Location: 378368..378871 Organism: Shigella flexneri Shi06HN006 isolate Human Replicon: chromosome
Accession: NZ_CP004057 Location: 378368..378871 Organism: Shigella flexneri Shi06HN006 isolate Human Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SFYV_RS01970 (373537) | 373537..374028 | + | 492 | WP_001138904.1 | nucleotide binding protein YajQ | - |
| SFYV_RS01975 (374088) | 374088..375818 | - | 1731 | WP_025748887.1 | hypothetical protein | - |
| SFYV_RS01980 (375871) | 375871..378024 | - | 2154 | WP_005060811.1 | SEL1-like repeat protein | - |
| SFYV_RS01990 (378174) | 378174..378871 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| SFYV_RS01995 (378919) | 378919..379380 | - | 462 | WP_014532172.1 | GNAT family N-acetyltransferase | Toxin Detail |
| SFYV_RS02005 (379452) | 379452..379763 | - | 312 | WP_005053053.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| SFYV_RS02010 (379947) | 379947..380837 | - | 891 | WP_000971346.1 | heme o synthase | - |
| SFYV_RS02015 (380849) | 380849..381178 | - | 330 | WP_000019869.1 | cytochrome o ubiquinol oxidase subunit IV | - |
| SFYV_RS02020 (381178) | 381178..381792 | - | 615 | WP_000179819.1 | cytochrome o ubiquinol oxidase subunit III | - |
| SFYV_RS02025 (381782) | 381782..383773 | - | 1992 | Protein_365 | cytochrome o ubiquinol oxidase subunit I | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Shigella flexneri 5a str. M90T | NZ_CP037923 | 4168367..4168870 | 0.004 |