MGE detailed information
MGE type: Prophage MGE length: 73380 bp
Accession: NZ_AP027978 Location: 2212177..2285556 Organism: Escherichia coli strain VE-V11-M Replicon: chromosome
Accession: NZ_AP027978 Location: 2212177..2285556 Organism: Escherichia coli strain VE-V11-M Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQK36_RS10870 (2208268) | 2208268..2208633 | + | 366 | WP_000276152.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| QQK36_RS10875 (2208620) | 2208620..2208949 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| QQK36_RS10880 (2208988) | 2208988..2209809 | - | 822 | WP_001260840.1 | serine protease | - |
| QQK36_RS10885 (2209909) | 2209909..2209992 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| QQK36_RS10890 (2210085) | 2210085..2210393 | - | 309 | WP_001342195.1 | acid resistance repetitive basic protein Asr | - |
| QQK36_RS10895 (2210817) | 2210817..2212070 | - | 1254 | WP_097246603.1 | MFS transporter | - |
| QQK36_RS10900 (2212177) | 2212177..2213070 | + | 894 | WP_001019530.1 | hypothetical protein | VF |
| QQK36_RS10905 (2213205) | 2213205..2214425 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| QQK36_RS10910 (2214550) | 2214550..2215245 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| QQK36_RS10915 (2215198) | 2215198..2216490 | - | 1293 | WP_071606760.1 | voltage-gated ClC-type chloride channel ClcB | - |
| QQK36_RS10920 (2216649) | 2216649..2217263 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| QQK36_RS10925 (2217306) | 2217306..2218160 | - | 855 | WP_000526490.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| QQK36_RS10930 (2218162) | 2218162..2218779 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| QQK36_RS10935 (2218790) | 2218790..2221214 | - | 2425 | Protein_2134 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QQK36_RS10940 (2221275) | 2221275..2223701 | - | 2427 | WP_284329805.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QQK36_RS10945 (2223900) | 2223900..2224205 | - | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| QQK36_RS10950 (2224313) | 2224313..2225023 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| QQK36_RS10955 (2225026) | 2225026..2225586 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| QQK36_RS10960 (2225621) | 2225621..2225962 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| QQK36_RS10965 (2226097) | 2226097..2226423 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| QQK36_RS10970 (2226629) | 2226629..2227843 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QQK36_RS10975 (2227855) | 2227855..2228874 | + | 1020 | WP_000836058.1 | Zn-dependent oxidoreductase | - |
| QQK36_RS10980 (2229062) | 2229062..2230342 | - | 1281 | WP_000876976.1 | hypothetical protein ; Integrase | Integrase |
| QQK36_RS10985 (2230377) | 2230377..2230628 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QQK36_RS10990 (2230701) | 2230701..2232410 | - | 1710 | Protein_2145 | 3'-5' exoribonuclease | - |
| QQK36_RS10995 (2232398) | 2232398..2232655 | + | 258 | Protein_2146 | hypothetical protein | - |
| QQK36_RS11000 (2232696) | 2232696..2233118 | + | 423 | WP_286611793.1 | DUF977 family protein | - |
| QQK36_RS11005 (2233115) | 2233115..2233603 | + | 489 | Protein_2148 | class I SAM-dependent methyltransferase | - |
| QQK36_RS11010 (2233986) | 2233986..2235523 | - | 1538 | Protein_2149 | IS66 family transposase ISEc22 | Transposase |
| QQK36_RS11015 (2235572) | 2235572..2235802 | - | 231 | Protein_2150 | IS66 family insertion sequence element accessory protein TnpB | - |
| QQK36_RS11020 (2235808) | 2235808..2235930 | - | 123 | Protein_2151 | IS66 family transposase ISEc22 | Transposase |
| QQK36_RS11025 (2236173) | 2236173..2236459 | + | 287 | Protein_2152 | hypothetical protein | - |
| QQK36_RS11030 (2237249) | 2237249..2238319 | + | 1071 | Protein_2153 | ISNCY family transposase ISCARN112 | Transposase |
| QQK36_RS11035 (2238392) | 2238392..2238541 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QQK36_RS11040 (2238978) | 2238978..2239309 | - | 332 | Protein_2155 | FlxA-like family protein | - |
| QQK36_RS11045 (2239512) | 2239512..2239817 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QQK36_RS11050 (2239842) | 2239842..2240081 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QQK36_RS11055 (2240081) | 2240081..2240368 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QQK36_RS11060 (2240440) | 2240440..2240595 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QQK36_RS11065 (2240812) | 2240812..2241063 | + | 252 | WP_000980999.1 | protein Rem | - |
| QQK36_RS11070 (2241130) | 2241130..2241408 | + | 279 | WP_072794391.1 | hypothetical protein | - |
| QQK36_RS11075 (2241410) | 2241410..2242459 | + | 1050 | WP_286611796.1 | DUF968 domain-containing protein | - |
| QQK36_RS11080 (2242473) | 2242473..2243225 | + | 753 | WP_286611798.1 | antitermination protein | - |
| QQK36_RS11085 (2243503) | 2243503..2243592 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QQK36_RS11090 (2243647) | 2243647..2243859 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QQK36_RS11095 (2244160) | 2244160..2244375 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QQK36_RS11100 (2244739) | 2244739..2244909 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QQK36_RS11105 (2245129) | 2245129..2245344 | + | 216 | WP_024241858.1 | phage lysis protein EssD | - |
| QQK36_RS11110 (2245349) | 2245349..2245660 | + | 312 | WP_286611800.1 | DUF1327 domain-containing protein | - |
| QQK36_RS11115 (2245657) | 2245657..2246190 | + | 534 | WP_191666801.1 | lysozyme | - |
| QQK36_RS11120 (2246187) | 2246187..2246683 | + | 497 | Protein_2171 | DUF2514 domain-containing protein | - |
| QQK36_RS11125 (2247045) | 2247045..2247257 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QQK36_RS11130 (2247268) | 2247268..2247456 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QQK36_RS11135 (2247459) | 2247459..2247524 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| QQK36_RS11140 (2247529) | 2247529..2247759 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QQK36_RS11145 (2247931) | 2247931..2248103 | + | 173 | Protein_2176 | addiction module toxin, GnsA/GnsB family | - |
| QQK36_RS11150 (2248255) | 2248255..2248665 | - | 411 | WP_286611805.1 | DUF1398 domain-containing protein | - |
| QQK36_RS11155 (2248797) | 2248797..2248955 | - | 159 | Protein_2178 | YlcI/YnfO family protein | - |
| QQK36_RS11160 (2249344) | 2249344..2249889 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| QQK36_RS11165 (2249864) | 2249864..2251669 | + | 1806 | WP_286611807.1 | phage terminase large subunit family protein | - |
| QQK36_RS11170 (2251669) | 2251669..2252244 | + | 576 | WP_286611809.1 | tail fiber assembly protein | - |
| QQK36_RS11175 (2252341) | 2252341..2252930 | - | 590 | Protein_2182 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QQK36_RS11180 (2253247) | 2253247..2253480 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QQK36_RS11185 (2253549) | 2253549..2253662 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QQK36_RS11190 (2254265) | 2254265..2255548 | + | 1284 | Protein_2185 | MHS family MFS transporter YdfJ | - |
| QQK36_RS11195 (2255637) | 2255637..2257097 | + | 1461 | WP_000527753.1 | mannitol dehydrogenase family protein | - |
| QQK36_RS11200 (2257133) | 2257133..2257336 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QQK36_RS11205 (2257514) | 2257514..2258200 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QQK36_RS11210 (2258289) | 2258289..2259035 | - | 747 | WP_000636571.1 | hypothetical protein | VF |
| QQK36_RS11215 (2259172) | 2259172..2261217 | + | 2046 | WP_001356186.1 | peptidyl-dipeptidase Dcp | - |
| QQK36_RS11220 (2261262) | 2261262..2261780 | - | 519 | WP_001024810.1 | 2-oxo-tetronate isomerase | - |
| QQK36_RS11225 (2262056) | 2262056..2262448 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| QQK36_RS11230 (2262703) | 2262703..2263593 | + | 891 | WP_000592826.1 | diguanylate cyclase DgcZ | - |
| QQK36_RS11235 (2263708) | 2263708..2263809 | - | 102 | WP_286611811.1 | protein MgtT | - |
| QQK36_RS11240 (2263809) | 2263809..2263904 | - | 96 | WP_000901367.1 | protein MgtS | - |
| QQK36_RS11245 (2264031) | 2264031..2265218 | - | 1188 | WP_001054189.1 | efflux MFS transporter YdeE | - |
| QQK36_RS11250 (2265413) | 2265413..2266312 | + | 900 | WP_286611814.1 | O-acetylserine/cysteine exporter | - |
| QQK36_RS11255 (2266343) | 2266343..2266561 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| QQK36_RS11260 (2266593) | 2266593..2266976 | - | 384 | WP_000091199.1 | hypothetical protein | VF |
| QQK36_RS11265 (2266996) | 2266996..2267430 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| QQK36_RS11270 (2267642) | 2267642..2268307 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| QQK36_RS11275 (2268332) | 2268332..2269522 | - | 1191 | WP_000210807.1 | L-arabinose MFS transporter | - |
| QQK36_RS11280 (2269672) | 2269672..2270786 | - | 1115 | Protein_2203 | putative protein YneK | - |
| QQK36_RS11285 (2270864) | 2270864..2271745 | - | 882 | WP_000366463.1 | hypothetical protein | VF |
| QQK36_RS11290 (2271846) | 2271846..2273234 | + | 1389 | WP_001296740.1 | succinate-semialdehyde dehydrogenase | - |
| QQK36_RS11295 (2273298) | 2273298..2274224 | + | 927 | WP_000257409.1 | glutaminase B | - |
| QQK36_RS11300 (2274224) | 2274224..2274583 | + | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| QQK36_RS11305 (2274722) | 2274722..2276139 | + | 1418 | Protein_2208 | diguanylate cyclase | - |
| QQK36_RS11310 (2276366) | 2276366..2277817 | + | 1452 | WP_000854624.1 | tagaturonate reductase | - |
| QQK36_RS11315 (2278024) | 2278024..2278938 | + | 915 | WP_000637082.1 | bestrophin family protein | - |
| QQK36_RS11320 (2278942) | 2278942..2279700 | - | 759 | WP_001286581.1 | hypothetical protein | VF |
| QQK36_RS11325 (2279757) | 2279757..2280047 | - | 291 | WP_000558527.1 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | - |
| QQK36_RS11330 (2280071) | 2280071..2280946 | - | 876 | WP_000774183.1 | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | - |
| QQK36_RS11335 (2280973) | 2280973..2281995 | - | 1023 | WP_000172470.1 | autoinducer 2 ABC transporter substrate-binding protein LsrB | - |
| QQK36_RS11340 (2282007) | 2282007..2282999 | - | 993 | WP_001222721.1 | autoinducer 2 ABC transporter permease LsrD | - |
| QQK36_RS11345 (2282999) | 2282999..2284027 | - | 1029 | WP_000911143.1 | autoinducer 2 ABC transporter permease LsrC | - |
| QQK36_RS11350 (2284021) | 2284021..2285556 | - | 1536 | WP_001194882.1 | hypothetical protein | VF |
| QQK36_RS11355 (2285805) | 2285805..2286758 | + | 954 | WP_000154340.1 | transcriptional regulator LsrR | - |
| QQK36_RS11360 (2286837) | 2286837..2288429 | + | 1593 | WP_097246867.1 | autoinducer-2 kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|