MGE detailed information
MGE type: Conjugative plasmid MGE length: 109686 bp
Accession: NZ_AP027928 Location: 1..109686 Organism: Escherichia fergusonii strain 30038 Replicon: plasmid p30038n2
Accession: NZ_AP027928 Location: 1..109686 Organism: Escherichia fergusonii strain 30038 Replicon: plasmid p30038n2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE84_RS23860 (1) | 1..858 | + | 858 | WP_000130961.1 | incFII family plasmid replication initiator RepA | - |
| QUE84_RS23865 (1769) | 1769..1906 | + | 138 | Protein_1 | ribbon-helix-helix domain-containing protein | - |
| QUE84_RS23870 (1910) | 1910..2149 | + | 240 | WP_228932009.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QUE84_RS23875 (2344) | 2344..3552 | - | 1209 | WP_000198526.1 | IS91 family transposase ISSbo1 | Transposase |
| QUE84_RS23880 (3533) | 3533..3610 | - | 78 | Protein_4 | hypothetical protein | - |
| QUE84_RS23885 (3593) | 3593..3855 | + | 263 | Protein_5 | conjugal transfer protein TraA | - |
| QUE84_RS23890 (3944) | 3944..4812 | + | 869 | Protein_6 | IS3 family transposase IS2 | Transposase |
| QUE84_RS23895 (4884) | 4884..5539 | + | 656 | Protein_7 | transposase | - |
| QUE84_RS23900 (5541) | 5541..5888 | + | 348 | Protein_8 | IS66 family insertion sequence element accessory protein TnpB | - |
| QUE84_RS23905 (5878) | 5878..6260 | + | 383 | Protein_9 | IS66 family transposase ISCro1 | Transposase |
| QUE84_RS23910 (6907) | 6907..7910 | + | 1004 | Protein_10 | IS110 family transposase ISSfl8 | Transposase |
| QUE84_RS23915 (8359) | 8359..8580 | + | 222 | Protein_11 | IS66 family insertion sequence element accessory protein TnpB | - |
| QUE84_RS23920 (8600) | 8600..8797 | + | 198 | Protein_12 | IS66 family transposase ISCro1 | Transposase |
| QUE84_RS23925 (8819) | 8819..8952 | - | 134 | Protein_13 | IS66 family transposase ISCro1 | Transposase |
| QUE84_RS23930 (9038) | 9038..10540 | - | 1503 | WP_000715084.1 | hypothetical protein | - |
| QUE84_RS23935 (10698) | 10698..11027 | - | 330 | Protein_15 | integrase core domain-containing protein | - |
| QUE84_RS23940 (11122) | 11122..11316 | + | 195 | Protein_16 | plasmid segregation protein ParM | - |
| QUE84_RS23945 (11343) | 11343..12134 | - | 792 | Protein_17 | IS630 family transposase | - |
| QUE84_RS23950 (12699) | 12699..13773 | + | 1075 | Protein_18 | Invasin | VF |
| QUE84_RS23955 (13795) | 13795..17004 | + | 3210 | WP_286356236.1 | Invasin | VF |
| QUE84_RS23960 (17301) | 17301..17486 | + | 186 | WP_000264903.1 | hypothetical protein | - |
| QUE84_RS23965 (17506) | 17506..17775 | + | 270 | Protein_21 | DUF2913 family protein | - |
| QUE84_RS23970 (17699) | 17699..17881 | + | 183 | WP_001246914.1 | hypothetical protein | - |
| QUE84_RS23975 (18888) | 18888..20114 | + | 1227 | WP_001119619.1 | phosphoadenosine phosphosulfate reductase | - |
| QUE84_RS23980 (20099) | 20099..20752 | + | 654 | WP_000528462.1 | ParB N-terminal domain-containing protein | - |
| QUE84_RS23985 (20897) | 20897..23092 | - | 2196 | WP_148713339.1 | Ferric aerobactin receptor | VF |
| QUE84_RS23990 (23098) | 23098..24435 | - | 1338 | WP_000710669.1 | L-lysine N6-monooxygenase | VF |
| QUE84_RS23995 (24432) | 24432..26174 | - | 1743 | WP_001015706.1 | Aerobactin synthase | VF |
| QUE84_RS24000 (26174) | 26174..27121 | - | 948 | WP_001287504.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| QUE84_RS24005 (27122) | 27122..28846 | - | 1725 | WP_002433343.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| QUE84_RS24010 (28982) | 28982..30175 | + | 1194 | WP_001134631.1 | MFS transporter | - |
| QUE84_RS24015 (30400) | 30400..33405 | - | 3006 | WP_024257006.1 | Invasin | VF |
| QUE84_RS24020 (33438) | 33438..33701 | - | 264 | Protein_32 | IS66 family transposase ISCro1 | Transposase |
| QUE84_RS24025 (33721) | 33721..34068 | - | 348 | WP_000624596.1 | IS66 family transposase ISCro1 | Transposase |
| QUE84_RS24030 (34068) | 34068..34718 | - | 651 | WP_000993941.1 | IS66 family transposase IS679 | Transposase |
| QUE84_RS24035 (34805) | 34805..35150 | + | 346 | Protein_35 | IS4/IS5 family transposase | - |
| QUE84_RS24040 (35428) | 35428..36297 | - | 870 | Protein_36 | IS110 family transposase ISEc66 | Transposase |
| QUE84_RS24045 (36451) | 36451..36942 | + | 492 | Protein_37 | IS4 family transposase ISSfl1 | Transposase |
| QUE84_RS24050 (36990) | 36990..37146 | - | 157 | Protein_38 | hypothetical protein | - |
| QUE84_RS24055 (37557) | 37557..37676 | - | 120 | Protein_39 | IS4 family transposase ISLpn6 | Transposase |
| QUE84_RS24060 (37731) | 37731..38111 | + | 381 | WP_001132570.1 | colicin-like pore-forming protein | - |
| QUE84_RS24065 (38129) | 38129..38476 | - | 348 | WP_000762575.1 | colicin E1 family microcin immunity protein | - |
| QUE84_RS24070 (38598) | 38598..38951 | + | 354 | WP_000142422.1 | DUF6404 family protein | - |
| QUE84_RS24075 (39023) | 39023..39291 | - | 269 | Protein_43 | hypothetical protein | - |
| QUE84_RS24080 (39288) | 39288..39548 | - | 261 | WP_000343091.1 | hypothetical protein | - |
| QUE84_RS24085 (40130) | 40130..40543 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| QUE84_RS24090 (40545) | 40545..41327 | + | 783 | WP_058799171.1 | site-specific integrase | - |
| QUE84_RS24095 (41458) | 41458..41733 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| QUE84_RS24100 (41727) | 41727..42371 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| QUE84_RS24105 (42600) | 42600..43571 | + | 972 | WP_001103691.1 | plasmid segregation protein ParM | - |
| QUE84_RS24110 (43576) | 43576..43968 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| QUE84_RS24115 (43973) | 43973..45244 | - | 1272 | WP_058799170.1 | Y-family DNA polymerase | - |
| QUE84_RS24120 (45244) | 45244..45681 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QUE84_RS24125 (45678) | 45678..45926 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QUE84_RS24130 (46344) | 46344..47246 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| QUE84_RS24135 (47243) | 47243..47554 | + | 312 | WP_031942433.1 | hypothetical protein | - |
| QUE84_RS24140 (47630) | 47630..48313 | + | 684 | WP_000086147.1 | DNA methylase | - |
| QUE84_RS24145 (48314) | 48314..48535 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| QUE84_RS24150 (48549) | 48549..48983 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| QUE84_RS24155 (49029) | 49029..49805 | + | 777 | WP_052929989.1 | hypothetical protein | - |
| QUE84_RS24160 (50221) | 50221..50646 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| QUE84_RS24165 (50693) | 50693..51115 | + | 423 | WP_000271744.1 | DUF1380 family protein | - |
| QUE84_RS24170 (51112) | 51112..51303 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QUE84_RS24175 (51581) | 51581..53248 | - | 1668 | WP_001762494.1 | group II intron reverse transcriptase/maturase | - |
| QUE84_RS24180 (54412) | 54412..54846 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QUE84_RS24185 (54938) | 54938..55204 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QUE84_RS24190 (55269) | 55269..56210 | + | 942 | WP_052940124.1 | Recombination-promoting nuclease RpnA | VF |
| QUE84_RS24195 (56272) | 56272..56442 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| QUE84_RS24200 (56473) | 56473..56724 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| QUE84_RS24205 (57304) | 57304..58152 | + | 849 | WP_125282800.1 | DUF4942 domain-containing protein | - |
| QUE84_RS24210 (58238) | 58238..58573 | - | 336 | WP_024133211.1 | hypothetical protein | - |
| QUE84_RS24215 (58808) | 58808..59140 | + | 333 | WP_001284001.1 | IncI1-type relaxosome accessory protein NikA | - |
| QUE84_RS24220 (59151) | 59151..61850 | + | 2700 | WP_286356214.1 | Protein TraI | Relaxase |
| QUE84_RS24225 (61887) | 61887..64178 | - | 2292 | WP_001289275.1 | F-type conjugative transfer protein TrbC | - |
| QUE84_RS24230 (64171) | 64171..65241 | - | 1071 | WP_000151576.1 | IncI1-type conjugal transfer protein TrbB | - |
| QUE84_RS24235 (65260) | 65260..66468 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (66648) | 66648..66710 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (66648) | 66648..66710 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (66648) | 66648..66710 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (66648) | 66648..66710 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| QUE84_RS24240 (66760) | 66760..66912 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| QUE84_RS24245 (66984) | 66984..67235 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| QUE84_RS24250 (67735) | 67735..67830 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| QUE84_RS24255 (67895) | 67895..68032 | - | 138 | WP_047088497.1 | hypothetical protein | - |
| QUE84_RS24260 (68077) | 68077..69303 | - | 1227 | WP_024186316.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| QUE84_RS24265 (69362) | 69362..69766 | + | 405 | WP_001175009.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| QUE84_RS24270 (70098) | 70098..70307 | - | 210 | WP_032178830.1 | hemolysin expression modulator Hha | - |
| QUE84_RS24275 (70405) | 70405..71067 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QUE84_RS24280 (71138) | 71138..73306 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| QUE84_RS24285 (73403) | 73403..73987 | - | 585 | WP_001037985.1 | IncI1-type conjugal transfer protein TraX | - |
| QUE84_RS24290 (74016) | 74016..75218 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| QUE84_RS24295 (75185) | 75185..75799 | - | 615 | WP_000337400.1 | IncI1-type conjugal transfer protein TraV | - |
| QUE84_RS24300 (75799) | 75799..78843 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| QUE84_RS24305 (78933) | 78933..79733 | - | 801 | WP_024126043.1 | IncI1-type conjugal transfer protein TraT | - |
| QUE84_RS24310 (79717) | 79717..79905 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QUE84_RS24315 (79969) | 79969..80373 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| QUE84_RS24320 (80424) | 80424..80951 | - | 528 | WP_024126044.1 | conjugal transfer protein TraQ | - |
| QUE84_RS24325 (80951) | 80951..81655 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QUE84_RS24330 (81655) | 81655..82944 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| QUE84_RS24335 (82947) | 82947..83930 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| QUE84_RS24340 (83941) | 83941..84633 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| QUE84_RS24345 (84630) | 84630..84977 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QUE84_RS24350 (84995) | 84995..88762 | - | 3768 | WP_001141527.1 | DUF5710 domain-containing protein | - |
| QUE84_RS24355 (88852) | 88852..89403 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| QUE84_RS24360 (89418) | 89418..89708 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| QUE84_RS24365 (89705) | 89705..90853 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QUE84_RS24370 (90850) | 90850..91668 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| QUE84_RS24375 (91665) | 91665..92123 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QUE84_RS24380 (92518) | 92518..93102 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QUE84_RS24385 (93162) | 93162..94364 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| QUE84_RS24390 (94449) | 94449..95273 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| QUE84_RS24395 (95424) | 95424..96578 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| QUE84_RS24400 (96724) | 96724..98262 | - | 1539 | WP_001547431.1 | IS66 family transposase ISEc8 | Transposase |
| QUE84_RS24405 (98312) | 98312..98659 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| QUE84_RS24410 (98656) | 98656..99036 | - | 381 | WP_072157534.1 | IS66 family transposase ISEc8 | Transposase |
| QUE84_RS24415 (99129) | 99129..99944 | - | 816 | Protein_111 | IS4 family transposase ISSfl9 | Transposase |
| QUE84_RS24420 (99983) | 99983..100708 | + | 726 | WP_104920585.1 | conjugal transfer complement resistance protein TraT | - |
| QUE84_RS24425 (100961) | 100961..103114 | + | 2154 | WP_104920584.1 | type IV conjugative transfer system coupling protein TraD | - |
| QUE84_RS24430 (103114) | 103114..107727 | + | 4614 | WP_104920583.1 | Multifunctional conjugation protein TraI | Relaxase |
| QUE84_RS24435 (107761) | 107761..108006 | + | 246 | Protein_115 | thermonuclease family protein | - |
| QUE84_RS24440 (108052) | 108052..108261 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| QUE84_RS24445 (108299) | 108299..108889 | + | 591 | WP_104920582.1 | DUF2726 domain-containing protein | - |
| QUE84_RS24450 (109129) | 109129..109383 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| QUE84_RS24455 (109490) | 109490..109674 | + | 185 | Protein_119 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|