MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 138690 bp
Accession: NZ_AP027256 Location: 3350780..3489469 Organism: Escherichia coli strain JNE141411 Replicon: chromosome
Accession: NZ_AP027256 Location: 3350780..3489469 Organism: Escherichia coli strain JNE141411 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUD91_RS16535 (3346037) | 3346037..3346777 | - | 741 | WP_024200903.1 | outer membrane beta-barrel protein | - |
| QUD91_RS16540 (3347210) | 3347210..3349036 | + | 1827 | WP_001106666.1 | two-component system sensor histidine kinase AtoS | - |
| QUD91_RS16545 (3349033) | 3349033..3350418 | + | 1386 | WP_000125284.1 | acetoacetate metabolism transcriptional regulator AtoC | - |
| QUD91_RS16550 (3350614) | 3350614..3351276 | + | 663 | WP_000850528.1 | acetate CoA-transferase subunit alpha | - |
| QUD91_RS16555 (3351276) | 3351276..3351926 | + | 651 | WP_000339054.1 | acetate CoA-transferase subunit beta | - |
| QUD91_RS16560 (3351923) | 3351923..3353245 | + | 1323 | WP_000580275.1 | TIGR00366 family protein | - |
| QUD91_RS16565 (3353276) | 3353276..3354460 | + | 1185 | WP_000786522.1 | acetyl-CoA acetyltransferase | - |
| QUD91_RS16570 (3354870) | 3354870..3355523 | - | 654 | Protein_3243 | IS66 family transposase ISEc23 | Transposase |
| QUD91_RS16575 (3355794) | 3355794..3356032 | + | 239 | Protein_3244 | IS66 family insertion sequence element accessory protein TnpB | - |
| QUD91_RS16580 (3356846) | 3356846..3357039 | + | 194 | Protein_3245 | hypothetical protein | - |
| QUD91_RS16585 (3357400) | 3357400..3357528 | + | 129 | WP_001304210.1 | IS3 family transposase ISKpn1 | Transposase |
| QUD91_RS16590 (3357583) | 3357583..3357710 | + | 128 | Protein_3247 | IS3 family transposase | - |
| QUD91_RS16595 (3357841) | 3357841..3358177 | - | 337 | Protein_3248 | hypothetical protein | - |
| QUD91_RS16600 (3358862) | 3358862..3359083 | - | 222 | WP_000477612.1 | hypothetical protein | - |
| QUD91_RS16605 (3359997) | 3359997..3361160 | + | 1164 | Protein_3250 | IS3 family transposase ISEc17 | Transposase |
| QUD91_RS16610 (3361799) | 3361799..3363886 | + | 2088 | WP_001223359.1 | bifunctional siderophore receptor/adhesin Iha | - |
| QUD91_RS16615 (3364027) | 3364027..3364218 | - | 192 | Protein_3252 | IS256 family transposase ISEic2 | Transposase |
| QUD91_RS16620 (3364232) | 3364232..3366076 | - | 1845 | WP_000593011.1 | Vitamin B12 transporter BtuB | VF |
| QUD91_RS16625 (3366977) | 3366977..3367234 | - | 258 | WP_001032733.1 | hypothetical protein | - |
| QUD91_RS16630 (3367303) | 3367303..3369000 | - | 1698 | WP_000401036.1 | sulfatase | - |
| QUD91_RS16635 (3369095) | 3369095..3370231 | - | 1137 | WP_001228923.1 | Outer membrane porin protein OmpD | VF |
| QUD91_RS16640 (3370907) | 3370907..3371115 | + | 209 | Protein_3257 | IS66 family insertion sequence element accessory protein TnpB | - |
| QUD91_RS16645 (3371102) | 3371102..3371291 | + | 190 | Protein_3258 | IS66 family insertion sequence element accessory protein TnpB | - |
| QUD91_RS16650 (3371294) | 3371294..3371482 | - | 189 | WP_000520190.1 | DUF1187 family protein | - |
| QUD91_RS16655 (3372005) | 3372005..3372146 | + | 142 | Protein_3260 | IS481 family transposase | - |
| QUD91_RS16660 (3372851) | 3372851..3373105 | + | 255 | WP_000004411.1 | helix-turn-helix transcriptional regulator | - |
| QUD91_RS16665 (3374004) | 3374004..3378095 | + | 4092 | WP_072161482.1 | Serine protease SepA autotransporter | VF |
| QUD91_RS16670 (3378342) | 3378342..3378467 | - | 126 | WP_001344629.1 | hypothetical protein | - |
| QUD91_RS16675 (3378601) | 3378601..3378966 | + | 366 | WP_000997728.1 | hypothetical protein | - |
| QUD91_RS16680 (3378976) | 3378976..3379167 | + | 192 | WP_000264910.1 | hypothetical protein | - |
| QUD91_RS16685 (3379201) | 3379201..3379410 | + | 210 | WP_000323309.1 | hypothetical protein | - |
| QUD91_RS16690 (3379437) | 3379437..3379796 | - | 360 | Protein_3267 | IS66 family transposase ISCro1 | Transposase |
| QUD91_RS16695 (3379908) | 3379908..3380552 | - | 645 | WP_001378814.1 | hypothetical protein | - |
| QUD91_RS16700 (3380573) | 3380573..3380842 | - | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| QUD91_RS16705 (3380921) | 3380921..3381559 | - | 639 | WP_000502848.1 | ParB N-terminal domain-containing protein | - |
| QUD91_RS16710 (3381544) | 3381544..3382776 | - | 1233 | WP_001285503.1 | phosphoadenosine phosphosulfate reductase | - |
| QUD91_RS16715 (3383276) | 3383276..3385957 | - | 2682 | WP_000256225.1 | AAA domain-containing protein | - |
| QUD91_RS16720 (3386198) | 3386198..3386378 | - | 181 | Protein_3273 | hypothetical protein | VF |
| QUD91_RS16725 (3386757) | 3386757..3386915 | - | 159 | Protein_3274 | hypothetical protein | VF |
| QUD91_RS16730 (3387074) | 3387074..3387379 | - | 306 | WP_032279885.1 | hypothetical protein | - |
| QUD91_RS16735 (3387445) | 3387445..3389190 | - | 1746 | WP_024200930.1 | NERD domain-containing protein/DEAD/DEAH box helicase | - |
| QUD91_RS16740 (3389368) | 3389368..3389943 | - | 576 | WP_000737515.1 | Attachment invasion locus protein | VF |
| QUD91_RS16745 (3390022) | 3390022..3390486 | - | 465 | Protein_3278 | type VI secretion system baseplate subunit TssE | - |
| QUD91_RS16750 (3390487) | 3390487..3390729 | - | 243 | WP_000993065.1 | hypothetical protein | - |
| QUD91_RS16755 (3390736) | 3390736..3391008 | - | 273 | WP_286335265.1 | hypothetical protein | - |
| QUD91_RS16760 (3391143) | 3391143..3391418 | - | 276 | WP_000549471.1 | hypothetical protein | - |
| QUD91_RS16765 (3391447) | 3391447..3391630 | + | 184 | Protein_3282 | transposase domain-containing protein | - |
| QUD91_RS16770 (3391672) | 3391672..3392199 | - | 528 | WP_000182867.1 | hypothetical protein | - |
| QUD91_RS16775 (3392631) | 3392631..3394164 | - | 1534 | Protein_3284 | IS3 family transposase | - |
| QUD91_RS16780 (3394848) | 3394848..3395102 | - | 255 | WP_001222075.1 | hypothetical protein | - |
| QUD91_RS16785 (3395099) | 3395099..3404035 | - | 8937 | WP_286335267.1 | 16S rRNA endonuclease CdiA | VF |
| QUD91_RS16790 (3404051) | 3404051..3404578 | - | 528 | WP_001243916.1 | Leukotoxin-activating lysine-acyltransferase LtxC | VF |
| QUD91_RS16795 (3404588) | 3404588..3405658 | - | 1071 | WP_224068013.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| QUD91_RS16800 (3405665) | 3405665..3406240 | - | 576 | Protein_3289 | POTRA domain-containing protein | - |
| QUD91_RS16805 (3406916) | 3406916..3407107 | + | 192 | WP_001287885.1 | DUF4222 domain-containing protein | - |
| QUD91_RS16810 (3407160) | 3407160..3407393 | - | 234 | WP_000124190.1 | hypothetical protein | - |
| QUD91_RS16815 (3407489) | 3407489..3408112 | - | 624 | WP_001366001.1 | hypothetical protein | - |
| QUD91_RS16820 (3408201) | 3408201..3408698 | - | 498 | WP_021552435.1 | hypothetical protein | - |
| QUD91_RS16825 (3408867) | 3408867..3408995 | - | 129 | WP_001379180.1 | hypothetical protein | - |
| QUD91_RS16830 (3409048) | 3409048..3409614 | - | 567 | WP_000287898.1 | inovirus-type Gp2 protein | - |
| QUD91_RS16835 (3409642) | 3409642..3409839 | - | 198 | WP_000553835.1 | inovirus-type Gp2 protein | - |
| QUD91_RS16840 (3410088) | 3410088..3410513 | - | 426 | WP_001013762.1 | putative zinc ribbon protein | - |
| QUD91_RS16845 (3410510) | 3410510..3410893 | - | 384 | WP_000271031.1 | putative zinc ribbon protein | - |
| QUD91_RS16850 (3411154) | 3411154..3411723 | - | 570 | WP_000221484.1 | inovirus Gp2 family protein | - |
| QUD91_RS16855 (3411927) | 3411927..3412124 | + | 198 | WP_000236763.1 | hypothetical protein | - |
| QUD91_RS16860 (3412470) | 3412470..3412649 | - | 180 | Protein_3301 | hemolysin expression modulator Hha | - |
| QUD91_RS16865 (3413371) | 3413371..3413577 | + | 207 | WP_000632607.1 | AlpA family transcriptional regulator | - |
| QUD91_RS16870 (3413664) | 3413664..3414266 | + | 603 | WP_000804456.1 | hypothetical protein | - |
| QUD91_RS16875 (3414588) | 3414588..3416072 | - | 1485 | WP_001297234.1 | YfjI family protein | - |
| QUD91_RS16880 (3417303) | 3417303..3418175 | + | 873 | WP_001069673.1 | GTPase family protein | - |
| QUD91_RS16885 (3418503) | 3418503..3421622 | + | 3120 | WP_000820542.1 | autotransporter adhesin Ag43 | - |
| QUD91_RS16890 (3421743) | 3421743..3424259 | + | 2517 | WP_001379184.1 | hypothetical protein | - |
| QUD91_RS16895 (3424335) | 3424335..3424790 | + | 456 | WP_000581504.1 | IrmA family protein | - |
| QUD91_RS16900 (3424869) | 3424869..3425102 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| QUD91_RS16905 (3425202) | 3425202..3426020 | + | 819 | WP_001234620.1 | DUF932 domain-containing protein | - |
| QUD91_RS16910 (3426075) | 3426075..3426560 | + | 486 | WP_000849580.1 | antirestriction protein | - |
| QUD91_RS16915 (3426576) | 3426576..3427052 | + | 477 | WP_001186727.1 | RadC family protein | - |
| QUD91_RS16920 (3427139) | 3427139..3427360 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| QUD91_RS16925 (3427440) | 3427440..3427808 | + | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QUD91_RS16930 (3427898) | 3427898..3428275 | + | 378 | WP_000854821.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| QUD91_RS16935 (3428272) | 3428272..3428469 | + | 198 | Protein_3316 | DUF5983 family protein | - |
| QUD91_RS16940 (3428497) | 3428497..3428694 | + | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| QUD91_RS16945 (3428779) | 3428779..3429621 | + | 843 | WP_001280493.1 | DUF4942 domain-containing protein | - |
| QUD91_RS16950 (3429902) | 3429902..3430438 | - | 537 | WP_000942795.1 | Type II secretion system protein M | VF |
| QUD91_RS16955 (3430440) | 3430440..3431618 | - | 1179 | WP_032283517.1 | Type II secretion system protein L | VF |
| QUD91_RS16960 (3431615) | 3431615..3432592 | - | 978 | WP_000633238.1 | Putative type II secretion system protein K | VF |
| QUD91_RS16965 (3432595) | 3432595..3433194 | - | 600 | WP_039022610.1 | Type II secretion system protein J | VF |
| QUD91_RS16970 (3433191) | 3433191..3433562 | - | 372 | WP_000820104.1 | Type II secretion system protein I | VF |
| QUD91_RS16975 (3433559) | 3433559..3434122 | - | 564 | WP_021293025.1 | Type II secretion system protein H | VF |
| QUD91_RS16980 (3434126) | 3434126..3434581 | - | 456 | WP_001087296.1 | Type II secretion system protein G | VF |
| QUD91_RS16985 (3434598) | 3434598..3435821 | - | 1224 | WP_001173453.1 | Type II secretion system protein F | VF |
| QUD91_RS16990 (3435821) | 3435821..3437314 | - | 1494 | WP_000249348.1 | Type II secretion system protein E | VF |
| QUD91_RS16995 (3437314) | 3437314..3439374 | - | 2061 | WP_000498829.1 | Type II secretion system protein D | VF |
| QUD91_RS17000 (3439404) | 3439404..3440363 | - | 960 | WP_000135063.1 | Type II secretion system protein C | VF |
| QUD91_RS17005 (3440381) | 3440381..3440791 | - | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| QUD91_RS17010 (3440857) | 3440857..3441666 | - | 810 | WP_001365924.1 | Leader peptidase PppA | VF |
| QUD91_RS17015 (3441806) | 3441806..3446374 | - | 4569 | WP_001034518.1 | hypothetical protein | VF |
| QUD91_RS17020 (3446860) | 3446860..3448542 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| QUD91_RS17025 (3448898) | 3448898..3451069 | - | 2172 | WP_000084077.1 | malate synthase G | - |
| QUD91_RS17030 (3451091) | 3451091..3451495 | - | 405 | WP_000853256.1 | GlcG family protein | - |
| QUD91_RS17035 (3451500) | 3451500..3452723 | - | 1224 | WP_001194680.1 | glycolate oxidase subunit GlcF | - |
| QUD91_RS17040 (3452734) | 3452734..3453786 | - | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| QUD91_RS17045 (3453786) | 3453786..3455285 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| QUD91_RS17050 (3455536) | 3455536..3456300 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| QUD91_RS17055 (3456307) | 3456307..3457449 | - | 1143 | WP_286335271.1 | protein YghO | - |
| QUD91_RS17060 (3457820) | 3457820..3459541 | + | 1722 | WP_286335273.1 | 4-hydroxyphenylalkanoate adenylyltransferase | VF |
| QUD91_RS17065 (3459538) | 3459538..3460452 | + | 915 | WP_001077144.1 | NAD-dependent epimerase/dehydratase family protein | - |
| QUD91_RS17070 (3460484) | 3460484..3460732 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| QUD91_RS17075 (3460732) | 3460732..3461904 | + | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| QUD91_RS17080 (3461940) | 3461940..3463019 | - | 1080 | WP_001300858.1 | LPS export ABC transporter permease LptG | - |
| QUD91_RS17085 (3463016) | 3463016..3464086 | - | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| QUD91_RS17090 (3464117) | 3464117..3464677 | - | 561 | WP_001299422.1 | YtfJ family protein | - |
| QUD91_RS17095 (3464689) | 3464689..3465513 | - | 825 | WP_000984999.1 | hypothetical protein | - |
| QUD91_RS17100 (3465513) | 3465513..3466862 | - | 1350 | WP_000896885.1 | lipopolysaccharide biosynthesis protein | - |
| QUD91_RS17105 (3466908) | 3466908..3467666 | - | 759 | WP_000339532.1 | hypothetical protein | - |
| QUD91_RS17110 (3467698) | 3467698..3468411 | - | 714 | WP_001076260.1 | dTMP kinase | - |
| QUD91_RS17115 (3468585) | 3468585..3469277 | + | 693 | WP_001190783.1 | dTMP kinase | - |
| QUD91_RS17120 (3469326) | 3469326..3470825 | - | 1500 | WP_000933296.1 | inorganic phosphate transporter PitB | - |
| QUD91_RS17125 (3471117) | 3471117..3472976 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| QUD91_RS17130 (3473181) | 3473181..3474047 | + | 867 | WP_001298746.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| QUD91_RS17135 (3474347) | 3474347..3475327 | + | 981 | WP_000399647.1 | IS110 family transposase IS621 | Transposase |
| QUD91_RS17140 (3475449) | 3475449..3475697 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| QUD91_RS17145 (3475710) | 3475710..3476051 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| QUD91_RS17150 (3476044) | 3476044..3476532 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| QUD91_RS17155 (3476525) | 3476525..3477019 | - | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| QUD91_RS17160 (3477019) | 3477019..3478722 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| QUD91_RS17165 (3478719) | 3478719..3479897 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| QUD91_RS17170 (3479887) | 3479887..3480873 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| QUD91_RS17175 (3480876) | 3480876..3481994 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| QUD91_RS17180 (3482183) | 3482183..3482470 | - | 288 | WP_001059136.1 | DUF2623 family protein YghW | - |
| QUD91_RS17185 (3482589) | 3482589..3483476 | - | 888 | WP_001297303.1 | YghX family hydrolase | - |
| QUD91_RS17190 (3483633) | 3483633..3484673 | + | 1041 | WP_000262156.1 | L-glyceraldehyde 3-phosphate reductase | - |
| QUD91_RS17195 (3484713) | 3484713..3485207 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| QUD91_RS17200 (3485398) | 3485398..3486282 | + | 885 | WP_000018760.1 | putative oxidoreductase YghA | VF |
| QUD91_RS17205 (3486554) | 3486554..3486979 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| QUD91_RS17210 (3486986) | 3486986..3487720 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| QUD91_RS17215 (3487972) | 3487972..3489159 | + | 1188 | WP_000763931.1 | cystathionine beta-lyase | - |
| QUD91_RS17220 (3489299) | 3489299..3489958 | + | 660 | WP_000268419.1 | DedA family general envelope maintenance protein YghB | - |
| QUD91_RS17225 (3489998) | 3489998..3490897 | - | 900 | WP_286335277.1 | DNA-binding transcriptional regulator YqhC | - |
| QUD91_RS17230 (3491091) | 3491091..3492254 | + | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| QUD91_RS17235 (3492359) | 3492359..3493186 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| QUD91_RS17240 (3493386) | 3493386..3494312 | + | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|