MGE detailed information
MGE type: Genomic_island MGE length: 48969 bp
Accession: NZ_AP026794 Location: 3872770..3921738 Organism: Escherichia coli strain IPCEC48 Replicon: chromosome
Accession: NZ_AP026794 Location: 3872770..3921738 Organism: Escherichia coli strain IPCEC48 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OPA53_RS19110 (3868971) | 3868971..3869558 | + | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
| OPA53_RS19115 (3869572) | 3869572..3871044 | + | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| OPA53_RS19120 (3871058) | 3871058..3872728 | + | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| OPA53_RS19125 (3873813) | 3873813..3874376 | + | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| OPA53_RS19130 (3874706) | 3874706..3875500 | + | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| OPA53_RS19135 (3875654) | 3875654..3876415 | + | 762 | WP_001213045.1 | protein HyxA | - |
| OPA53_RS19140 (3876457) | 3876457..3878748 | + | 2292 | WP_000798065.1 | outer membrane autotransporter HyxB | - |
| OPA53_RS19145 (3878932) | 3878932..3879600 | + | 669 | WP_001005267.1 | protein YkgH | - |
| OPA53_RS19150 (3879843) | 3879843..3880538 | - | 696 | WP_001295803.1 | lactate utilization protein C | - |
| OPA53_RS19155 (3880531) | 3880531..3881958 | - | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| OPA53_RS19160 (3881969) | 3881969..3882688 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| OPA53_RS19165 (3883214) | 3883214..3884068 | - | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| OPA53_RS19170 (3884295) | 3884295..3885620 | + | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| OPA53_RS19175 (3885729) | 3885729..3885965 | + | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| OPA53_RS19180 (3885977) | 3885977..3886570 | + | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| OPA53_RS19185 (3886730) | 3886730..3887599 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| OPA53_RS19190 (3887847) | 3887847..3888704 | + | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| OPA53_RS19195 (3888829) | 3888829..3893076 | - | 4248 | WP_000092552.1 | Invasin | VF |
| OPA53_RS19200 (3893642) | 3893642..3894493 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| OPA53_RS19205 (3894520) | 3894520..3895509 | + | 990 | WP_001172283.1 | aldo/keto reductase | - |
| OPA53_RS19210 (3895540) | 3895540..3896433 | - | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| OPA53_RS19215 (3896633) | 3896633..3897559 | - | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| OPA53_RS19220 (3897716) | 3897716..3898636 | + | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| OPA53_RS19225 (3898809) | 3898809..3899951 | + | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| OPA53_RS19230 (3900424) | 3900424..3900525 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| OPA53_RS19235 (3900890) | 3900890..3901153 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| OPA53_RS19240 (3901153) | 3901153..3901293 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| OPA53_RS19245 (3901363) | 3901363..3901553 | - | 191 | Protein_3787 | hypothetical protein | - |
| OPA53_RS19250 (3902377) | 3902377..3902919 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| OPA53_RS19255 (3902994) | 3902994..3903581 | + | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| OPA53_RS19260 (3903638) | 3903638..3904306 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| OPA53_RS19265 (3904332) | 3904332..3906857 | + | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| OPA53_RS19270 (3906847) | 3906847..3908490 | + | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| OPA53_RS19275 (3908459) | 3908459..3909169 | + | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| OPA53_RS19280 (3909476) | 3909476..3909805 | + | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| OPA53_RS19285 (3909817) | 3909817..3909983 | - | 167 | Protein_3795 | tail fiber assembly protein | - |
| OPA53_RS19290 (3910054) | 3910054..3910668 | - | 615 | WP_001019923.1 | YagU family protein | - |
| OPA53_RS19295 (3910883) | 3910883..3911068 | - | 186 | WP_000146240.1 | hypothetical protein | - |
| OPA53_RS19300 (3911117) | 3911117..3911275 | + | 159 | Protein_3798 | integrase | - |
| OPA53_RS19305 (3911502) | 3911502..3911837 | + | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| OPA53_RS19310 (3912129) | 3912129..3912821 | + | 693 | WP_228940800.1 | Prophage integrase IntA ; Integrase | Integrase |
| OPA53_RS19315 (3912986) | 3912986..3913906 | - | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| OPA53_RS19320 (3913893) | 3913893..3914675 | - | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| OPA53_RS19325 (3914959) | 3914959..3918057 | + | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| OPA53_RS19330 (3918051) | 3918051..3919688 | + | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| OPA53_RS19335 (3919678) | 3919678..3920925 | + | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| OPA53_RS19340 (3921132) | 3921132..3921290 | + | 159 | WP_071550417.1 | ash family protein | - |
| OPA53_RS19345 (3921268) | 3921268..3921738 | + | 471 | WP_000201175.1 | hypothetical protein | - |
| OPA53_RS19350 (3921884) | 3921884..3922087 | + | 204 | Protein_3808 | integrase | - |
| OPA53_RS19360 (3922292) | 3922292..3923545 | - | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| OPA53_RS19365 (3923557) | 3923557..3924660 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| OPA53_RS19370 (3924949) | 3924949..3926004 | + | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| OPA53_RS19375 (3926043) | 3926043..3926444 | - | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|