MGE detailed information
MGE type: Mobilizable plasmid MGE length: 60945 bp
Accession: NZ_AP026790 Location: 1..60945 Organism: Escherichia coli strain IPCEC42 Replicon: plasmid pIPCEC42_2
Accession: NZ_AP026790 Location: 1..60945 Organism: Escherichia coli strain IPCEC42 Replicon: plasmid pIPCEC42_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OPA56_RS26410 (IPCEC42_50670) | 1..1029 | + | 1029 | WP_072834377.1 | plasmid replication initiator RepA | - |
| OPA56_RS26415 | 1730..1920 | + | 191 | Protein_1 | hypothetical protein | - |
| OPA56_RS26420 (IPCEC42_50690) | 2570..2722 | + | 153 | Protein_2 | FlmC family protein | - |
| OPA56_RS26425 | 2670..2789 | + | 120 | WP_228932012.1 | Hok/Gef family protein | - |
| OPA56_RS26430 (IPCEC42_50700) | 2939..3535 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| OPA56_RS26435 (IPCEC42_50710) | 3553..3837 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| OPA56_RS26440 (IPCEC42_50720) | 3911..4576 | - | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| OPA56_RS26445 (IPCEC42_50730) | 5174..5503 | + | 330 | WP_000855120.1 | hypothetical protein | - |
| OPA56_RS26450 (IPCEC42_50740) | 6084..6407 | + | 324 | WP_072834379.1 | hypothetical protein | - |
| OPA56_RS26455 (IPCEC42_50750) | 6449..6658 | + | 210 | WP_000866036.1 | hypothetical protein | - |
| OPA56_RS26460 (IPCEC42_50760) | 6755..6979 | + | 225 | WP_000814381.1 | hypothetical protein | - |
| OPA56_RS26465 (IPCEC42_50770) | 7031..7291 | + | 261 | WP_000702247.1 | hypothetical protein | Toxin Detail |
| OPA56_RS26470 (IPCEC42_50780) | 7281..7532 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| OPA56_RS26475 (IPCEC42_50790) | 8082..8360 | + | 279 | WP_000545938.1 | hypothetical protein | - |
| OPA56_RS26480 (IPCEC42_50810) | 8780..9046 | + | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| OPA56_RS26485 (IPCEC42_50820) | 9153..9596 | - | 444 | WP_000068545.1 | hypothetical protein | - |
| OPA56_RS26490 (IPCEC42_50830) | 9893..10075 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| OPA56_RS26495 (IPCEC42_50840) | 10100..10537 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| OPA56_RS26500 (IPCEC42_50850) | 10668..10994 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| OPA56_RS26505 (IPCEC42_50860) | 11014..11721 | - | 708 | WP_021503228.1 | hypothetical protein | - |
| OPA56_RS26510 (IPCEC42_50870) | 11723..12475 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| OPA56_RS26515 (IPCEC42_50880) | 12493..12894 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| OPA56_RS26520 (IPCEC42_50890) | 13263..13604 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| OPA56_RS26525 (IPCEC42_50900) | 13601..17914 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| OPA56_RS26530 (IPCEC42_50910) | 18036..19010 | + | 975 | WP_012478345.1 | IS30 family transposase ISApl1 | Transposase |
| OPA56_RS26535 (IPCEC42_50920) | 19206..20831 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| OPA56_RS26540 (IPCEC42_50930) | 20903..21655 | + | 753 | WP_063107420.1 | PAP2 family protein | - |
| OPA56_RS26545 (IPCEC42_50940) | 21636..22076 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| OPA56_RS26550 (IPCEC42_50950) | 22422..22628 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| OPA56_RS26555 (IPCEC42_50960) | 22697..24862 | - | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| OPA56_RS26560 (IPCEC42_50970) | 24867..25442 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| OPA56_RS26565 (IPCEC42_50980) | 25612..27288 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| OPA56_RS26570 (IPCEC42_50990) | 27383..27915 | - | 533 | Protein_32 | thermonuclease family protein | - |
| OPA56_RS26575 (IPCEC42_51000) | 27945..28598 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| OPA56_RS26580 (IPCEC42_51010) | 28610..29734 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| OPA56_RS26585 (IPCEC42_51020) | 31409..32467 | - | 1059 | WP_264793746.1 | hypothetical protein | VF |
| OPA56_RS26590 (IPCEC42_51030) | 32480..33115 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| OPA56_RS26595 (IPCEC42_51040) | 33119..33601 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| OPA56_RS26600 (IPCEC42_51050) | 33667..34224 | - | 558 | WP_072834375.1 | type 4 pilus major pilin | - |
| OPA56_RS26605 (IPCEC42_51060) | 34269..35378 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| OPA56_RS26610 (IPCEC42_51070) | 35369..36907 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| OPA56_RS26615 (IPCEC42_51080) | 36932..37426 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| OPA56_RS26620 (IPCEC42_51090) | 37410..38720 | - | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| OPA56_RS26625 (IPCEC42_51100) | 38771..40414 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| OPA56_RS26630 (IPCEC42_51110) | 40407..40943 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| OPA56_RS26635 (IPCEC42_51120) | 40990..42948 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| OPA56_RS26640 (IPCEC42_51130) | 42964..44019 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| OPA56_RS26645 (IPCEC42_51140) | 44038..45177 | - | 1140 | WP_000790640.1 | Type IV secretion system protein virB10 | VF |
| OPA56_RS26650 (IPCEC42_51150) | 45167..45937 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| OPA56_RS26655 (IPCEC42_51160) | 45934..46668 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| OPA56_RS26660 (IPCEC42_51180) | 46834..49191 | - | 2358 | WP_063078682.1 | VirB4 family type IV secretion system protein | - |
| OPA56_RS26665 (IPCEC42_51190) | 49197..49517 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| OPA56_RS26670 (IPCEC42_51200) | 49588..49878 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| OPA56_RS26675 (IPCEC42_51210) | 49878..50462 | - | 585 | WP_001177113.1 | Type IV secretion system protein virB1 | VF |
| OPA56_RS26680 (IPCEC42_51220) | 50483..50881 | - | 399 | WP_001153665.1 | hypothetical protein | - |
| OPA56_RS26685 (IPCEC42_51230) | 51000..51437 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| OPA56_RS26690 (IPCEC42_51240) | 51443..52678 | - | 1236 | WP_015059538.1 | hypothetical protein | VF |
| OPA56_RS26695 (IPCEC42_51250) | 52681..52980 | - | 300 | WP_000835764.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| OPA56_RS26700 (IPCEC42_51260) | 53028..53819 | + | 792 | WP_022645137.1 | DUF5710 domain-containing protein | - |
| OPA56_RS26705 (IPCEC42_51270) | 54074..54298 | - | 225 | WP_000713561.1 | EexN family lipoprotein | - |
| OPA56_RS26710 (IPCEC42_51280) | 54307..54951 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| OPA56_RS26715 (IPCEC42_51290) | 54957..55952 | - | 996 | WP_001028541.1 | hypothetical protein | VF |
| OPA56_RS26720 (IPCEC42_51300) | 55956..56213 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| OPA56_RS26725 (IPCEC42_51310) | 56210..56512 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| OPA56_RS26730 (IPCEC42_51320) | 56783..56995 | - | 213 | WP_039022940.1 | hypothetical protein | - |
| OPA56_RS26735 (IPCEC42_51330) | 57006..57176 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| OPA56_RS26740 (IPCEC42_51340) | 57180..57623 | - | 444 | WP_072037179.1 | NfeD family protein | - |
| OPA56_RS26745 (IPCEC42_51350) | 57997..58950 | - | 954 | WP_072109880.1 | SPFH domain-containing protein | - |
| OPA56_RS26750 (IPCEC42_51360) | 58977..59153 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| OPA56_RS26755 (IPCEC42_51370) | 59146..59361 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| OPA56_RS26760 (IPCEC42_51380) | 59354..59806 | - | 453 | WP_223666486.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|