MGE detailed information
MGE type: Genomic_island MGE length: 25858 bp
Accession: NZ_AP026788 Location: 829013..854870 Organism: Escherichia coli strain IPCEC42 Replicon: chromosome
Accession: NZ_AP026788 Location: 829013..854870 Organism: Escherichia coli strain IPCEC42 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OPA56_RS04075 (824185) | 824185..825530 | + | 1346 | Protein_801 | IS4-like element IS4 family transposase | - |
| OPA56_RS04080 (825711) | 825711..826127 | + | 417 | Protein_802 | general secretion pathway protein GspK | - |
| OPA56_RS04085 (826133) | 826133..826735 | + | 603 | WP_001327867.1 | type II secretion system protein GspL | - |
| OPA56_RS04090 (826708) | 826708..827301 | + | 594 | WP_001327868.1 | type II secretion system protein GspL | - |
| OPA56_RS04095 (827303) | 827303..827839 | + | 537 | WP_000942819.1 | GspM family type II secretion system protein YghD | - |
| OPA56_RS04100 (829013) | 829013..829789 | + | 777 | WP_000124284.1 | hypothetical protein | VF |
| OPA56_RS04105 (829786) | 829786..830457 | + | 672 | WP_000590255.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| OPA56_RS04110 (830469) | 830469..830864 | + | 396 | WP_001233350.1 | Bifunctional protein HldE | VF |
| OPA56_RS04115 (830880) | 830880..832115 | + | 1236 | WP_000668515.1 | hypothetical protein | - |
| OPA56_RS04120 (832169) | 832169..835759 | + | 3591 | WP_264793737.1 | Glycosyltransferase Gtf1 | VF |
| OPA56_RS04125 (835738) | 835738..835968 | + | 231 | WP_264793738.1 | hypothetical protein | - |
| OPA56_RS04130 (836071) | 836071..837099 | + | 1029 | WP_001044673.1 | putative HTH-type transcriptional regulator YbaQ | VF |
| OPA56_RS04135 (837105) | 837105..838100 | + | 996 | WP_001208051.1 | hypothetical protein | - |
| OPA56_RS04140 (838262) | 838262..839500 | - | 1239 | WP_001161824.1 | hypothetical protein | VF |
| OPA56_RS04145 (839535) | 839535..841562 | - | 2028 | WP_000579529.1 | hypothetical protein | VF |
| OPA56_RS04150 (841559) | 841559..842299 | - | 741 | WP_001327873.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| OPA56_RS04155 (842309) | 842309..843985 | - | 1677 | WP_001327874.1 | Vitamin B12 transport ATP-binding protein BacA | VF |
| OPA56_RS04160 (844009) | 844009..845157 | - | 1149 | WP_000905920.1 | hypothetical protein | VF |
| OPA56_RS04165 (845229) | 845229..846212 | - | 984 | WP_001327875.1 | Putative lipoprotein/NMB1162 | VF |
| OPA56_RS04170 (847023) | 847023..847193 | - | 171 | Protein_820 | IS110 family transposase | - |
| OPA56_RS04175 (847610) | 847610..848544 | - | 935 | Protein_821 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| OPA56_RS04180 (848537) | 848537..848932 | - | 396 | WP_000208383.1 | DUF6088 family protein | - |
| OPA56_RS04185 (849001) | 849001..849846 | - | 846 | WP_001280441.1 | DUF4942 domain-containing protein | - |
| OPA56_RS04190 (850130) | 850130..851149 | - | 1020 | WP_000875213.1 | IS110 family transposase ISEc66 | Transposase |
| OPA56_RS04195 (851363) | 851363..851560 | - | 198 | WP_000839260.1 | DUF957 domain-containing protein | - |
| OPA56_RS04200 (851577) | 851577..852065 | - | 489 | WP_000761701.1 | DUF5983 family protein | - |
| OPA56_RS04205 (852062) | 852062..852439 | - | 378 | WP_000854688.1 | TA system toxin CbtA family protein | Toxin Detail |
| OPA56_RS04210 (852516) | 852516..852896 | - | 381 | WP_001285596.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| OPA56_RS04215 (852946) | 852946..853590 | - | 645 | WP_000094917.1 | hypothetical protein | - |
| OPA56_RS04220 (853609) | 853609..853830 | - | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| OPA56_RS04225 (853893) | 853893..854369 | - | 477 | WP_001186726.1 | RadC family protein | - |
| OPA56_RS04230 (854385) | 854385..854870 | - | 486 | WP_000849564.1 | antirestriction protein | - |
| OPA56_RS04235 (854925) | 854925..855743 | - | 819 | WP_001234616.1 | DUF932 domain-containing protein | - |
| OPA56_RS04240 (855844) | 855844..856077 | - | 234 | WP_001119727.1 | DUF905 family protein | - |
| OPA56_RS04245 (856156) | 856156..856611 | - | 456 | WP_000581502.1 | IrmA family protein | - |
| OPA56_RS04250 (856687) | 856687..859203 | - | 2517 | WP_001328678.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|