NZ_AP0267341..152182

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 152182 bp
Accession: NZ_AP026734        Location: 1..152182         Organism: Shewanella xiamenensis strain NUITM-VS2       Replicon: plasmid pNUITM-VS2_2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OO995_RS21995 (NUITMVS2_42840) 1..1101 + 1101 WP_000350011.1 RepB family plasmid replication initiator protein -
OO995_RS22000 (NUITMVS2_42860) 1887..2051 + 165 WP_014342194.1 hypothetical protein -
OO995_RS22005 (NUITMVS2_42870) 2138..2572 - 435 WP_000883925.1 hypothetical protein -
OO995_RS22010 (NUITMVS2_42880) 2590..3705 - 1116 WP_000946102.1 phosphoadenosine phosphosulfate reductase family protein -
OO995_RS22015 (NUITMVS2_42890) 3974..4582 + 609 WP_000849071.1 hypothetical protein -
OO995_RS22020 (NUITMVS2_42900) 4587..5108 + 522 WP_000393785.1 hypothetical protein -
OO995_RS22025 (NUITMVS2_42910) 5111..5632 + 522 WP_000805800.1 hypothetical protein -
OO995_RS22030 (NUITMVS2_42920) 5729..6202 + 474 WP_000057877.1 hypothetical protein -
OO995_RS22035 (NUITMVS2_42930) 6213..6506 + 294 WP_001370730.1 hypothetical protein -
OO995_RS22040 (NUITMVS2_42940) 6511..7365 + 855 WP_000539392.1 hypothetical protein -
OO995_RS22045 (NUITMVS2_42950) 7365..8324 + 960 WP_000829616.1 S49 family peptidase -
OO995_RS22050 (NUITMVS2_42960) 8340..9200 + 861 WP_000139698.1 DsbA family protein -
OO995_RS22055 (NUITMVS2_42970) 9234..9662 + 429 WP_000591074.1 hypothetical protein -
OO995_RS22060 (NUITMVS2_42980) 9719..10078 + 360 WP_000422768.1 hypothetical protein -
OO995_RS22065 (NUITMVS2_42990) 10078..10524 + 447 WP_000919345.1 Fe3+-siderophore ABC transporter permease -
OO995_RS22070 (NUITMVS2_43000) 10521..11039 + 519 WP_000210756.1 nitrite reductase -
OO995_RS22075 (NUITMVS2_43010) 11039..11269 + 231 WP_000972663.1 hypothetical protein -
OO995_RS22080 (NUITMVS2_43020) 11256..12113 + 858 WP_001167032.1 hypothetical protein -
OO995_RS22085 (NUITMVS2_43040) 12344..12871 + 528 WP_001236377.1 thermonuclease family protein -
OO995_RS22090 (NUITMVS2_43050) 12929..13201 + 273 WP_001043047.1 HU family DNA-binding protein -
OO995_RS22095 (NUITMVS2_43060) 13289..13582 + 294 WP_001239997.1 chromosome segregation protein ParM -
OO995_RS22100 (NUITMVS2_43070) 13609..13911 - 303 WP_000124640.1 XRE family transcriptional regulator Antitoxin Detail
OO995_RS22105 (NUITMVS2_43080) 13916..14266 - 351 WP_000270043.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
OO995_RS22110 (NUITMVS2_43090) 14429..14977 + 549 WP_001061574.1 transcriptional regulator -
OO995_RS22115 (NUITMVS2_43100) 15318..15512 + 195 WP_000343597.1 hypothetical protein -
OO995_RS22120 (NUITMVS2_43110) 15523..15894 + 372 WP_000516916.1 hypothetical protein -
OO995_RS22125 (NUITMVS2_43120) 15887..16357 + 471 WP_001281821.1 hypothetical protein -
OO995_RS22130 (NUITMVS2_43130) 16372..16707 - 336 WP_000683476.1 hypothetical protein -
OO995_RS22135 (NUITMVS2_43140) 16804..17292 + 489 WP_001273096.1 DUF1643 domain-containing protein -
OO995_RS22140 (NUITMVS2_43150) 17295..17792 + 498 WP_000062185.1 hypothetical protein -
OO995_RS22145 (NUITMVS2_43160) 18007..18711 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
OO995_RS22150 (NUITMVS2_43170) 18836..20329 + 1494 WP_001120888.1 IS91-like element ISVsa3 family transposase -
OO995_RS22155 (NUITMVS2_43180) 20557..20694 - 138 WP_164538590.1 hypothetical protein -
OO995_RS22160 (NUITMVS2_43190) 21041..21958 + 918 WP_094309312.1 macrolide hydrolase EstT -
OO995_RS22165 (NUITMVS2_43200) 21948..23105 + 1158 WP_094309310.1 tetracycline-inactivating monooxygenase Tet(X4) -
OO995_RS22170 (NUITMVS2_43210) 23444..24937 + 1494 WP_001120888.1 IS91-like element ISVsa3 family transposase -
OO995_RS22175 (NUITMVS2_43220) 25437..26261 - 825 WP_264889591.1 ATP-binding cassette domain-containing protein -
OO995_RS22180 (NUITMVS2_43230) 26243..27223 - 981 WP_004181825.1 IS5-like element ISKpn26 family transposase -
OO995_RS22185 (NUITMVS2_43240) 27264..28259 - 996 WP_264889592.1 ATP-binding cassette domain-containing protein -
OO995_RS22195 (NUITMVS2_43270) 29230..29838 + 609 Protein_41 recombinase family protein -
OO995_RS22200 (NUITMVS2_43280) 29835..30059 + 225 WP_000743213.1 hypothetical protein -
OO995_RS22205 (NUITMVS2_43290) 30158..30469 + 312 WP_000338945.1 hypothetical protein -
OO995_RS22210 (NUITMVS2_43300) 30643..31428 + 786 WP_001151304.1 ParA family protein -
OO995_RS22215 (NUITMVS2_43310) 31432..32613 + 1182 WP_001207227.1 KorB domain-containing protein -
OO995_RS22220 (NUITMVS2_43320) 32662..32934 + 273 WP_000703827.1 helix-turn-helix domain-containing protein -
OO995_RS22225 (NUITMVS2_43330) 32987..33622 - 636 WP_000074431.1 N-6 DNA methylase -
OO995_RS22230 (NUITMVS2_43340) 33714..33857 - 144 WP_000939033.1 hypothetical protein -
OO995_RS22235 (NUITMVS2_43350) 34176..34553 + 378 WP_001125905.1 hypothetical protein -
OO995_RS22240 (NUITMVS2_43360) 34546..34827 + 282 WP_000044824.1 hypothetical protein -
OO995_RS22245 (NUITMVS2_43370) 34802..35476 + 675 WP_000344151.1 thymidylate kinase -
OO995_RS22250 (NUITMVS2_43380) 35469..35975 + 507 WP_000566600.1 hypothetical protein -
OO995_RS22255 (NUITMVS2_43390) 35981..36292 + 312 WP_002210541.1 hypothetical protein -
OO995_RS22260 (NUITMVS2_43400) 36301..36801 + 501 WP_000647189.1 hypothetical protein -
OO995_RS22265 (NUITMVS2_43410) 36805..38232 + 1428 WP_000936896.1 DNA cytosine methyltransferase -
OO995_RS22270 (NUITMVS2_43420) 38232..38888 + 657 WP_000268551.1 hypothetical protein -
OO995_RS22275 (NUITMVS2_43440) 39094..39312 + 219 WP_000362482.1 hypothetical protein -
OO995_RS22280 (NUITMVS2_43450) 39406..40023 + 618 WP_000464631.1 hypothetical protein -
OO995_RS22285 (NUITMVS2_43470) 40256..40534 + 279 WP_014386427.1 hypothetical protein -
OO995_RS22290 (NUITMVS2_43480) 40626..41114 - 489 WP_000468105.1 hypothetical protein -
OO995_RS22295 (NUITMVS2_43490) 41129..43321 - 2193 WP_000366822.1 DNA topoisomerase 3 -
OO995_RS22300 (NUITMVS2_43500) 43321..43554 - 234 WP_001191892.1 hypothetical protein -
OO995_RS22305 (NUITMVS2_43510) 43536..44153 - 618 WP_001249396.1 hypothetical protein -
OO995_RS22310 (NUITMVS2_43520) 44321..47299 + 2979 WP_001337757.1 MobH family relaxase -
OO995_RS22315 (NUITMVS2_43530) 47296..49161 + 1866 WP_000178856.1 conjugative transfer system coupling protein TraD -
OO995_RS22320 (NUITMVS2_43540) 49211..49756 + 546 WP_000228720.1 hypothetical protein -
OO995_RS22325 (NUITMVS2_43550) 49713..50342 + 630 WP_000743450.1 DUF4400 domain-containing protein -
OO995_RS22330 50352..50798 + 447 WP_000122506.1 hypothetical protein -
OO995_RS22335 (NUITMVS2_43570) 50808..51185 + 378 WP_000869261.1 hypothetical protein -
OO995_RS22340 (NUITMVS2_43580) 51185..51847 + 663 WP_001231463.1 hypothetical protein -
OO995_RS22345 52028..52171 + 144 WP_001275801.1 hypothetical protein -
OO995_RS22350 (NUITMVS2_43590) 52183..52548 + 366 WP_001052531.1 hypothetical protein -
OO995_RS22355 (NUITMVS2_43600) 52693..52974 + 282 WP_000805625.1 type IV conjugative transfer system protein TraL -
OO995_RS22360 (NUITMVS2_43610) 52971..53597 + 627 WP_001049716.1 TraE/TraK family type IV conjugative transfer system protein -
OO995_RS22365 (NUITMVS2_43620) 53581..54498 + 918 WP_000794249.1 type-F conjugative transfer system secretin TraK -
OO995_RS22370 (NUITMVS2_43630) 54498..55811 + 1314 WP_024131605.1 TraB/VirB10 family protein -
OO995_RS22375 (NUITMVS2_43640) 55808..56386 + 579 WP_000793435.1 type IV conjugative transfer system lipoprotein TraV -
OO995_RS22380 (NUITMVS2_43650) 56390..56782 + 393 WP_000479535.1 TraA family conjugative transfer protein -
OO995_RS22385 (NUITMVS2_43660) 56983..62514 + 5532 WP_000606833.1 Ig-like domain-containing protein -
OO995_RS22390 (NUITMVS2_43670) 62663..63370 + 708 WP_001259347.1 DsbC family protein -
OO995_RS22395 (NUITMVS2_43680) 63367..65814 + 2448 WP_000637386.1 type IV secretion system protein TraC -
OO995_RS22400 (NUITMVS2_43690) 65829..66146 + 318 WP_000351984.1 hypothetical protein -
OO995_RS22405 (NUITMVS2_43700) 66143..66673 + 531 WP_001010738.1 S26 family signal peptidase -
OO995_RS22410 (NUITMVS2_43710) 66636..67901 + 1266 WP_000621288.1 TrbC family F-type conjugative pilus assembly protein -
OO995_RS22415 (NUITMVS2_43720) 67898..68569 + 672 WP_001337754.1 EAL domain-containing protein -
OO995_RS22420 68569..69573 + 1005 WP_043940352.1 TraU family protein -
OO995_RS22425 (NUITMVS2_43740) 69689..72487 + 2799 WP_001256487.1 conjugal transfer mating pair stabilization protein TraN -
OO995_RS22430 (NUITMVS2_43750) 72526..73386 - 861 WP_000709517.1 hypothetical protein -
OO995_RS22435 (NUITMVS2_43760) 73509..74150 - 642 WP_000796664.1 hypothetical protein -
OO995_RS22440 (NUITMVS2_43770) 74444..74764 + 321 WP_000547566.1 hypothetical protein -
OO995_RS22445 (NUITMVS2_43780) 75068..75253 + 186 WP_001186917.1 hypothetical protein -
OO995_RS22450 (NUITMVS2_43790) 75473..76441 + 969 WP_000085162.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
OO995_RS22455 (NUITMVS2_43800) 76452..77360 + 909 WP_000739139.1 hypothetical protein -
OO995_RS22460 (NUITMVS2_43810) 77421..77951 + 531 WP_000987165.1 single-stranded DNA-binding protein -
OO995_RS22465 (NUITMVS2_43820) 78046..79035 + 990 WP_001282585.1 phage recombination protein Bet -
OO995_RS22470 (NUITMVS2_43830) 79098..80108 + 1011 WP_000706865.1 YqaJ viral recombinase family protein -
OO995_RS22475 (NUITMVS2_43840) 80308..81585 + 1278 WP_000170086.1 DUF3150 domain-containing protein -
OO995_RS22480 (NUITMVS2_43850) 81670..83466 + 1797 WP_021598075.1 VWA domain-containing protein -
OO995_RS22485 (NUITMVS2_43860) 83528..83863 + 336 WP_001071288.1 hypothetical protein -
OO995_RS22490 (NUITMVS2_43870) 84128..84667 + 540 WP_000018872.1 hypothetical protein -
OO995_RS22495 (NUITMVS2_43880) 84758..85258 + 501 WP_000793769.1 hypothetical protein -
OO995_RS22500 (NUITMVS2_43890) 85332..86216 + 885 WP_000477209.1 hypothetical protein -
OO995_RS22505 (NUITMVS2_43900) 86282..86506 + 225 WP_001102700.1 class I ribonucleotide reductase maintenance protein YfaE -
OO995_RS22510 (NUITMVS2_43910) 86568..86957 + 390 WP_000026577.1 hypothetical protein -
OO995_RS22515 (NUITMVS2_43920) 86947..87399 + 453 WP_001176699.1 hypothetical protein -
OO995_RS22520 87477..87719 - 243 WP_002210529.1 hypothetical protein -
OO995_RS22525 (NUITMVS2_43940) 87737..87928 + 192 WP_000651508.1 hypothetical protein -
OO995_RS22530 (NUITMVS2_43950) 87931..88350 + 420 WP_001909295.1 hypothetical protein -
OO995_RS22535 (NUITMVS2_43960) 88542..88886 + 345 WP_000209093.1 hypothetical protein -
OO995_RS22540 (NUITMVS2_43970) 88964..89266 + 303 WP_000410925.1 hypothetical protein -
OO995_RS22545 (NUITMVS2_43980) 89344..90969 + 1626 WP_000201432.1 DNA cytosine methyltransferase -
OO995_RS22550 (NUITMVS2_43990) 91030..91461 + 432 WP_000687894.1 hypothetical protein -
OO995_RS22555 (NUITMVS2_44000) 91535..92089 + 555 WP_001093868.1 hypothetical protein -
OO995_RS22560 (NUITMVS2_44010) 92322..92708 + 387 WP_000042274.1 hypothetical protein -
OO995_RS22565 (NUITMVS2_44020) 92796..95249 + 2454 WP_001187970.1 phosphoadenosine phosphosulfate reductase -
OO995_RS22570 (NUITMVS2_44030) 95451..95654 + 204 WP_000050848.1 hypothetical protein -
OO995_RS22575 (NUITMVS2_44040) 95726..96331 + 606 WP_000071870.1 5'-deoxynucleotidase -
OO995_RS22580 (NUITMVS2_44050) 96324..96593 + 270 WP_000184110.1 hypothetical protein -
OO995_RS22585 (NUITMVS2_44060) 96607..96825 + 219 WP_000260293.1 hypothetical protein -
OO995_RS22590 (NUITMVS2_44070) 96899..97456 + 558 WP_000064431.1 pyruvate dehydrogenase -
OO995_RS22595 (NUITMVS2_44080) 97531..98382 + 852 WP_000595210.1 hypothetical protein -
OO995_RS22600 (NUITMVS2_44090) 98587..98733 + 147 WP_001032042.1 hypothetical protein -
OO995_RS22605 (NUITMVS2_44100) 98840..99226 + 387 WP_001077335.1 hypothetical protein -
OO995_RS22610 (NUITMVS2_44110) 99404..101131 + 1728 WP_000122923.1 toprim domain-containing protein -
OO995_RS22615 (NUITMVS2_44120) 101118..101396 + 279 WP_000268337.1 hypothetical protein -
OO995_RS22620 (NUITMVS2_44130) 101469..101708 + 240 WP_000714162.1 permease -
OO995_RS22625 101718..101834 + 117 WP_000338626.1 hypothetical protein -
OO995_RS22630 (NUITMVS2_44140) 101955..102329 + 375 WP_000868821.1 hypothetical protein -
OO995_RS22635 (NUITMVS2_44150) 102443..103168 + 726 WP_000988732.1 hypothetical protein -
OO995_RS22640 (NUITMVS2_44160) 103409..107563 + 4155 WP_014342219.1 RHS repeat-associated core domain-containing protein -
OO995_RS22645 (NUITMVS2_44170) 107560..107832 + 273 WP_000787563.1 MafI family immunity protein -
OO995_RS22650 (NUITMVS2_44180) 107837..108079 + 243 WP_000750746.1 hypothetical protein -
OO995_RS22655 (NUITMVS2_44190) 108127..108426 + 300 WP_011872911.1 hypothetical protein -
OO995_RS22660 (NUITMVS2_44200) 108593..109045 + 453 WP_000791469.1 hypothetical protein -
OO995_RS22665 (NUITMVS2_44210) 109234..109407 - 174 Protein_135 IS6 family transposase -
OO995_RS22670 (NUITMVS2_44220) 109661..110824 + 1164 WP_220788780.1 MexC family multidrug efflux RND transporter periplasmic adaptor subunit -
OO995_RS22675 (NUITMVS2_44230) 110840..113974 + 3135 WP_220731199.1 efflux RND transporter permease subunit -
OO995_RS22680 (NUITMVS2_44240) 113979..115412 + 1434 WP_003152694.1 multidrug efflux transporter outer membrane subunit TOprJ1 -
OO995_RS22685 (NUITMVS2_44250) 115778..116759 - 982 Protein_139 transposase -
OO995_RS22690 (NUITMVS2_44260) 116773..117852 + 1080 WP_228740399.1 ISL3 family transposase -
OO995_RS22695 (NUITMVS2_44270) 117918..119501 - 1584 Protein_141 mercury(II) reductase -
OO995_RS22700 (NUITMVS2_44280) 119602..120156 - 555 Protein_142 hypothetical protein -
OO995_RS22705 (NUITMVS2_44290) 120241..121812 - 1572 WP_039026336.1 ATP-binding cassette domain-containing protein -
OO995_RS22710 (NUITMVS2_44300) 122238..122798 + 561 WP_003124096.1 recombinase family protein -
OO995_RS22715 (NUITMVS2_44310) 122801..125767 + 2967 WP_141462514.1 Tn3 family transposase -
OO995_RS22720 (NUITMVS2_44320) 125774..125902 - 129 WP_259650919.1 hypothetical protein -
OO995_RS22725 (NUITMVS2_44330) 125912..126160 - 249 WP_169708473.1 metal-sensing transcriptional repressor -
OO995_RS22730 (NUITMVS2_44340) 126394..127491 + 1098 WP_008786738.1 cation diffusion facilitator family transporter -
OO995_RS22735 (NUITMVS2_44350) 127535..127912 + 378 WP_008786737.1 metalloregulator ArsR/SmtB family transcription factor -
OO995_RS22740 (NUITMVS2_44360) 128096..131113 - 3018 WP_134696397.1 Tn3-like element IS3000 family transposase -
OO995_RS22745 (NUITMVS2_44370) 131255..131857 - 603 WP_000278322.1 hypothetical protein -
OO995_RS22750 (NUITMVS2_44380) 132119..132400 + 282 WP_000575657.1 hypothetical protein -
OO995_RS22755 (NUITMVS2_44400) 132699..133235 + 537 WP_000949433.1 hypothetical protein -
OO995_RS22760 (NUITMVS2_44410) 133238..134248 + 1011 WP_000543934.1 tyrosine-type recombinase/integrase -
OO995_RS22765 134253..135122 + 870 WP_000997323.1 3'-5' exonuclease -
OO995_RS22770 (NUITMVS2_44430) 135119..135610 + 492 WP_000139717.1 hypothetical protein -
OO995_RS22775 (NUITMVS2_44440) 135927..136802 + 876 WP_001097010.1 DNA replication terminus site-binding protein -
OO995_RS22780 (NUITMVS2_44450) 136955..137995 + 1041 WP_000101568.1 DNA-binding protein -
OO995_RS22785 (NUITMVS2_44470) 138282..139793 + 1512 WP_000811656.1 UvrD-helicase domain-containing protein -
OO995_RS22790 (NUITMVS2_44480) 139904..140944 + 1041 WP_001326396.1 conjugal transfer protein TraF -
OO995_RS22795 (NUITMVS2_44490) 140946..142379 + 1434 WP_000256129.1 conjugal transfer protein TraH -
OO995_RS22800 (NUITMVS2_44500) 142392..146006 + 3615 WP_000534551.1 conjugal transfer protein TraG N-terminal domain-containing protein -
OO995_RS22805 (NUITMVS2_44510) 146044..146406 - 363 WP_000683483.1 hypothetical protein -
OO995_RS22810 (NUITMVS2_44520) 147122..147394 + 273 WP_000356489.1 helix-turn-helix domain-containing protein -
OO995_RS22815 (NUITMVS2_44530) 147394..147927 + 534 WP_000790610.1 transglycosylase SLT domain-containing protein -
OO995_RS22820 (NUITMVS2_44540) 147938..148546 + 609 WP_000891157.1 hypothetical protein -
OO995_RS22825 (NUITMVS2_44550) 148543..149094 + 552 WP_001020646.1 FlhC family transcriptional regulator -
OO995_RS22830 (NUITMVS2_44560) 149154..149573 - 420 WP_000651490.1 H-NS family nucleoid-associated regulatory protein -
OO995_RS22835 (NUITMVS2_44570) 149575..149868 - 294 WP_000919078.1 hypothetical protein -
OO995_RS22840 (NUITMVS2_44580) 149885..150868 - 984 WP_000077458.1 ParM/StbA family protein -
OO995_RS22845 (NUITMVS2_44590) 151367..151906 + 540 WP_001447712.1 conjugative transfer protein MobI(A/C) -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance