MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94960 bp
Accession: NZ_AP026119 Location: 1..94960 Organism: Escherichia coli strain CEC13004 Replicon: plasmid pCEC13004_1
Accession: NZ_AP026119 Location: 1..94960 Organism: Escherichia coli strain CEC13004 Replicon: plasmid pCEC13004_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO879_RS26915 (1) | 1..255 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| OO879_RS26920 (491) | 491..565 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| OO879_RS26925 (558) | 558..1415 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| OO879_RS26930 (2327) | 2327..2611 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| OO879_RS26935 (2611) | 2611..2886 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OO879_RS26940 (2981) | 2981..3187 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| OO879_RS26945 (3287) | 3287..3502 | - | 216 | Protein_6 | transposase | - |
| OO879_RS26950 (3546) | 3546..4112 | - | 567 | Protein_7 | IS3 family transposase ISSd1 | Transposase |
| OO879_RS26955 (4112) | 4112..4528 | - | 417 | Protein_8 | IS91 family transposase | - |
| OO879_RS26960 (4528) | 4528..4713 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| OO879_RS26965 (4890) | 4890..7100 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| OO879_RS26970 (7144) | 7144..7533 | + | 390 | WP_001172748.1 | cytochrome b562 | - |
| OO879_RS26975 (7590) | 7590..8578 | + | 989 | Protein_12 | IS3 family transposase IS629 | Transposase |
| OO879_RS26980 (8759) | 8759..12661 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| OO879_RS26985 (12852) | 12852..14065 | + | 1214 | WP_162829242.1 | IS3 family transposase IS629 | Transposase |
| OO879_RS26990 (14230) | 14230..14711 | - | 482 | Protein_15 | IS1 family transposase IS1N | Transposase |
| OO879_RS26995 (16152) | 16152..16973 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| OO879_RS27000 (16973) | 16973..18079 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| OO879_RS27005 (18169) | 18169..19890 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| OO879_RS27010 (19964) | 19964..20962 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| OO879_RS27015 (21015) | 21015..21203 | + | 189 | Protein_20 | hypothetical protein | - |
| OO879_RS27020 (21330) | 21330..21710 | + | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| OO879_RS27025 (21707) | 21707..22054 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| OO879_RS27030 (22104) | 22104..23642 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| OO879_RS27035 (23757) | 23757..23843 | - | 87 | Protein_24 | IS3 family transposase ISEhe3 | Transposase |
| OO879_RS27040 (24284) | 24284..26980 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| OO879_RS27045 (27067) | 27067..27942 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| OO879_RS27050 (27943) | 27943..29910 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| OO879_RS27055 (29910) | 29910..31415 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| OO879_RS27060 (31417) | 31417..32640 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| OO879_RS27065 (32671) | 32671..33105 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| OO879_RS27070 (33102) | 33102..33656 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| OO879_RS27075 (33671) | 33671..34018 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| OO879_RS27080 (34015) | 34015..34614 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| OO879_RS27085 (34611) | 34611..35588 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| OO879_RS27090 (35522) | 35522..36799 | + | 1278 | WP_011321724.1 | Type II secretion system protein L | VF |
| OO879_RS27095 (36786) | 36786..37298 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| OO879_RS27100 (37473) | 37473..38189 | + | 717 | WP_001358889.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| OO879_RS27105 (38281) | 38281..38682 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| OO879_RS27110 (38861) | 38861..40032 | + | 1172 | WP_085949322.1 | IS3 family transposase ISLad1 | Transposase |
| OO879_RS27115 (40573) | 40573..41088 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| OO879_RS27120 (41090) | 41090..44086 | + | 2997 | WP_000217733.1 | Hemolysin, chromosomal | VF |
| OO879_RS27125 (44136) | 44136..46256 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| OO879_RS27130 (46260) | 46260..47699 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| OO879_RS27135 (47766) | 47766..47960 | + | 195 | WP_001303402.1 | hypothetical protein | VF |
| OO879_RS27140 (47990) | 47990..48274 | + | 285 | WP_001358890.1 | Transcriptional repressor MprA | VF |
| OO879_RS27145 (48443) | 48443..48673 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| OO879_RS27150 (48794) | 48794..49534 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| OO879_RS27155 (49819) | 49819..50796 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| OO879_RS27160 (51204) | 51204..51404 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| OO879_RS27165 (51401) | 51401..52021 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| OO879_RS27170 (52018) | 52018..52701 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| OO879_RS27175 (53160) | 53160..53378 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| OO879_RS27180 (53380) | 53380..53685 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| OO879_RS27185 (53686) | 53686..54492 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| OO879_RS27195 (57168) | 57168..58334 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| OO879_RS27200 (58334) | 58334..59305 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| OO879_RS27205 (60000) | 60000..60902 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| OO879_RS27210 (60906) | 60906..61211 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| OO879_RS27215 (61288) | 61288..61971 | + | 684 | WP_000085945.1 | DNA methylase | - |
| OO879_RS27220 (61972) | 61972..62193 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| OO879_RS27225 (62087) | 62087..62641 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| OO879_RS27230 (62687) | 62687..63463 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| OO879_RS27235 (63648) | 63648..64073 | + | 426 | WP_001198923.1 | antirestriction protein | - |
| OO879_RS27240 (64120) | 64120..64542 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| OO879_RS27245 (64539) | 64539..64730 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| OO879_RS27250 (64700) | 64700..65209 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| OO879_RS27255 (65726) | 65726..65956 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| OO879_RS27260 (66008) | 66008..67369 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| OO879_RS27265 (67416) | 67416..67979 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| OO879_RS27270 (68065) | 68065..68526 | - | 462 | WP_001304227.1 | hypothetical protein | - |
| OO879_RS27275 (68596) | 68596..68802 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| OO879_RS27280 (68828) | 68828..69280 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| OO879_RS27285 (69337) | 69337..69570 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| OO879_RS27290 (69636) | 69636..71594 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| OO879_RS27295 (71649) | 71649..72083 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| OO879_RS27300 (72080) | 72080..72841 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - (72810) | 72810..73008 | + | 199 | NuclAT_0 | - | - |
| - (72810) | 72810..73008 | + | 199 | NuclAT_0 | - | - |
| - (72810) | 72810..73008 | + | 199 | NuclAT_0 | - | - |
| - (72810) | 72810..73008 | + | 199 | NuclAT_0 | - | - |
| OO879_RS27305 (73015) | 73015..73164 | + | 150 | Protein_78 | DUF5431 family protein | - |
| OO879_RS27310 (73106) | 73106..73231 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| OO879_RS27315 (73365) | 73365..75386 | + | 2022 | Protein_80 | hypothetical protein | Relaxase |
| OO879_RS27320 (75454) | 75454..75885 | + | 432 | WP_001453090.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| OO879_RS27330 (77821) | 77821..78170 | - | 350 | Protein_83 | IS3 family transposase IS3H | Transposase |
| OO879_RS27335 (78264) | 78264..78527 | + | 264 | Protein_84 | IS21 family transposase ISEc62 | Transposase |
| OO879_RS27340 (78567) | 78567..78687 | + | 121 | Protein_85 | IS21 family transposase ISEc62 | Transposase |
| OO879_RS27345 (78684) | 78684..78836 | + | 153 | Protein_86 | IS1 family transposase | - |
| OO879_RS27350 (78943) | 78943..88452 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| OO879_RS27355 (88526) | 88526..88750 | + | 225 | Protein_88 | IS3 family transposase IS3H | Transposase |
| OO879_RS27360 (88743) | 88743..88988 | - | 246 | Protein_89 | IS3 family transposase IS1203 | Transposase |
| OO879_RS27365 (88995) | 88995..89246 | - | 252 | Protein_90 | IS3 family transposase IS1203 | Transposase |
| OO879_RS27370 (89303) | 89303..90691 | + | 1389 | Protein_91 | Multifunctional conjugation protein TraI | Relaxase |
| OO879_RS27375 (90711) | 90711..91457 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| OO879_RS27380 (91516) | 91516..92376 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| OO879_RS27385 (92479) | 92479..93039 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| OO879_RS27390 (93172) | 93172..93384 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| OO879_RS27395 (93629) | 93629..94090 | + | 462 | WP_001233856.1 | thermonuclease family protein | - |
| OO879_RS27400 (94136) | 94136..94345 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| OO879_RS27405 (94383) | 94383..94721 | + | 339 | WP_000766796.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|