MGE detailed information
MGE type: Genomic_island MGE length: 18696 bp
Accession: NZ_AP026106 Location: 5252532..5271227 Organism: Escherichia coli strain CEC01311 Replicon: chromosome
Accession: NZ_AP026106 Location: 5252532..5271227 Organism: Escherichia coli strain CEC01311 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO831_RS25760 (5247677) | 5247677..5248855 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| OO831_RS25765 (5248923) | 5248923..5249765 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| OO831_RS25770 (5250031) | 5250031..5252220 | - | 2190 | WP_000535067.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| OO831_RS25775 (5252532) | 5252532..5252798 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| OO831_RS25780 (5252795) | 5252795..5253562 | - | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| OO831_RS25785 (5253572) | 5253572..5254723 | - | 1152 | WP_001301805.1 | double-cubane-cluster-containing anaerobic reductase | - |
| OO831_RS25790 (5254839) | 5254839..5256110 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| OO831_RS25795 (5256151) | 5256151..5257383 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| OO831_RS25800 (5257850) | 5257850..5258782 | + | 933 | WP_000181144.1 | Recombination-promoting nuclease RpnD | VF |
| OO831_RS25805 (5259025) | 5259025..5260437 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| OO831_RS25810 (5260614) | 5260614..5260778 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| OO831_RS25815 (5260875) | 5260875..5261756 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| OO831_RS25820 (5261804) | 5261804..5262967 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| OO831_RS25825 (5263014) | 5263014..5263355 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - (5263350) | 5263350..5263426 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5263350) | 5263350..5263426 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5263350) | 5263350..5263426 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5263350) | 5263350..5263426 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5263350) | 5263350..5263426 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5263350) | 5263350..5263426 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5263350) | 5263350..5263426 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5263350) | 5263350..5263426 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| OO831_RS25830 (5263576) | 5263576..5265330 | - | 1755 | WP_097336120.1 | restriction endonuclease subunit S | - |
| OO831_RS25835 (5265330) | 5265330..5266799 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| OO831_RS25840 (5266866) | 5266866..5269298 | - | 2433 | WP_000819029.1 | DEAD/DEAH box helicase family protein | - |
| OO831_RS25845 (5269576) | 5269576..5269860 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| OO831_RS25850 (5269869) | 5269869..5271227 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| OO831_RS25855 (5271296) | 5271296..5272252 | - | 957 | WP_001297640.1 | GTPase | - |
| OO831_RS25860 (5272263) | 5272263..5272466 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| OO831_RS25865 (5272516) | 5272516..5274666 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| OO831_RS25870 (5274959) | 5274959..5275501 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |