MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95008 bp
Accession: NZ_AP026096 Location: 1..95008 Organism: Escherichia coli strain 53_142304 Replicon: plasmid pNIID53_1
Accession: NZ_AP026096 Location: 1..95008 Organism: Escherichia coli strain 53_142304 Replicon: plasmid pNIID53_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO816_RS26730 (1) | 1..255 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| OO816_RS26735 (491) | 491..565 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| OO816_RS26740 (558) | 558..1415 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| OO816_RS26745 (2327) | 2327..2611 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| OO816_RS26750 (2611) | 2611..2886 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OO816_RS26755 (2981) | 2981..3187 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| OO816_RS26760 (3287) | 3287..3502 | - | 216 | Protein_6 | transposase | - |
| OO816_RS26765 (3546) | 3546..4112 | - | 567 | Protein_7 | IS3 family transposase ISSd1 | Transposase |
| OO816_RS26770 (4112) | 4112..4528 | - | 417 | Protein_8 | IS91 family transposase | - |
| OO816_RS26775 (4528) | 4528..4713 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| OO816_RS26780 (4890) | 4890..7100 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| OO816_RS26785 (7144) | 7144..7533 | + | 390 | WP_001172748.1 | cytochrome b562 | - |
| OO816_RS26790 (7590) | 7590..8578 | + | 989 | Protein_12 | IS3 family transposase IS629 | Transposase |
| OO816_RS26795 (8759) | 8759..12661 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| OO816_RS26800 (12852) | 12852..14065 | + | 1214 | WP_162829242.1 | IS3 family transposase IS629 | Transposase |
| OO816_RS26805 (14230) | 14230..14711 | - | 482 | Protein_15 | IS1 family transposase IS1N | Transposase |
| OO816_RS26810 (16147) | 16147..16968 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| OO816_RS26815 (16968) | 16968..18074 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| OO816_RS26820 (18164) | 18164..19885 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| OO816_RS26825 (19959) | 19959..20957 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| OO816_RS26830 (21010) | 21010..21198 | + | 189 | Protein_20 | hypothetical protein | - |
| OO816_RS26835 (21325) | 21325..21705 | + | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| OO816_RS26840 (21702) | 21702..22049 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| OO816_RS26845 (22099) | 22099..23637 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| OO816_RS26850 (23752) | 23752..23838 | - | 87 | Protein_24 | IS3 family transposase ISEhe3 | Transposase |
| OO816_RS26855 (24288) | 24288..26984 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| OO816_RS26860 (27071) | 27071..27946 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| OO816_RS26865 (27947) | 27947..29914 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| OO816_RS26870 (29914) | 29914..31419 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| OO816_RS26875 (31421) | 31421..32644 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| OO816_RS26880 (32675) | 32675..33109 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| OO816_RS26885 (33106) | 33106..33660 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| OO816_RS26890 (33675) | 33675..34022 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| OO816_RS26895 (34019) | 34019..34618 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| OO816_RS26900 (34615) | 34615..35592 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| OO816_RS26905 (35526) | 35526..36803 | + | 1278 | WP_011321724.1 | Type II secretion system protein L | VF |
| OO816_RS26910 (36790) | 36790..37302 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| OO816_RS26915 (37477) | 37477..38193 | + | 717 | WP_001358889.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| OO816_RS26920 (38285) | 38285..38686 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| OO816_RS26925 (38865) | 38865..40036 | + | 1172 | WP_085949322.1 | IS3 family transposase ISLad1 | Transposase |
| OO816_RS26930 (40577) | 40577..41092 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| OO816_RS26935 (41094) | 41094..44090 | + | 2997 | WP_000217733.1 | Hemolysin, chromosomal | VF |
| OO816_RS26940 (44140) | 44140..46260 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| OO816_RS26945 (46264) | 46264..47703 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| OO816_RS26950 (47770) | 47770..47964 | + | 195 | WP_001303402.1 | hypothetical protein | VF |
| OO816_RS26955 (47994) | 47994..48278 | + | 285 | WP_001358890.1 | Transcriptional repressor MprA | VF |
| OO816_RS26960 (48447) | 48447..48677 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| OO816_RS26965 (48798) | 48798..49538 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| OO816_RS26970 (49823) | 49823..50800 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| OO816_RS26975 (51208) | 51208..51408 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| OO816_RS26980 (51405) | 51405..52025 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| OO816_RS26985 (52022) | 52022..52705 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| OO816_RS26990 (53164) | 53164..53382 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| OO816_RS26995 (53384) | 53384..53689 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| OO816_RS27000 (53690) | 53690..54496 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| OO816_RS27010 (57172) | 57172..58338 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| OO816_RS27015 (58338) | 58338..59309 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| OO816_RS27020 (60004) | 60004..60906 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| OO816_RS27025 (60910) | 60910..61215 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| OO816_RS27030 (61292) | 61292..61975 | + | 684 | WP_000085945.1 | DNA methylase | - |
| OO816_RS27035 (61976) | 61976..62197 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| OO816_RS27040 (62091) | 62091..62645 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| OO816_RS27045 (62691) | 62691..63467 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| OO816_RS27050 (63652) | 63652..64077 | + | 426 | WP_001198930.1 | antirestriction protein | - |
| OO816_RS27055 (64124) | 64124..64546 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| OO816_RS27060 (64543) | 64543..64734 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| OO816_RS27065 (64704) | 64704..65213 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| OO816_RS27070 (65730) | 65730..65960 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| OO816_RS27075 (66012) | 66012..67373 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| OO816_RS27080 (67420) | 67420..67983 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| OO816_RS27085 (68069) | 68069..68518 | - | 450 | WP_001451816.1 | hypothetical protein | - |
| OO816_RS27090 (68588) | 68588..68794 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| OO816_RS27095 (68820) | 68820..69272 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| OO816_RS27100 (69329) | 69329..69562 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| OO816_RS27105 (69628) | 69628..71586 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| OO816_RS27110 (71641) | 71641..72075 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| OO816_RS27115 (72072) | 72072..72833 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - (72802) | 72802..73000 | + | 199 | NuclAT_0 | - | - |
| - (72802) | 72802..73000 | + | 199 | NuclAT_0 | - | - |
| - (72802) | 72802..73000 | + | 199 | NuclAT_0 | - | - |
| - (72802) | 72802..73000 | + | 199 | NuclAT_0 | - | - |
| OO816_RS27120 (73007) | 73007..73156 | + | 150 | Protein_78 | DUF5431 family protein | - |
| OO816_RS27125 (73098) | 73098..73223 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| OO816_RS27130 (73357) | 73357..75378 | + | 2022 | Protein_80 | hypothetical protein | Relaxase |
| OO816_RS27135 (75446) | 75446..75877 | + | 432 | WP_001453090.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| OO816_RS27145 (77869) | 77869..78218 | - | 350 | Protein_83 | IS3 family transposase IS3H | Transposase |
| OO816_RS27150 (78312) | 78312..78575 | + | 264 | Protein_84 | IS21 family transposase ISEc62 | Transposase |
| OO816_RS27155 (78615) | 78615..78735 | + | 121 | Protein_85 | IS21 family transposase ISEc62 | Transposase |
| OO816_RS27160 (78732) | 78732..78884 | + | 153 | Protein_86 | IS1 family transposase | - |
| OO816_RS27165 (78991) | 78991..88500 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| OO816_RS27170 (88574) | 88574..88798 | + | 225 | Protein_88 | IS3 family transposase IS3H | Transposase |
| OO816_RS27175 (88791) | 88791..89036 | - | 246 | Protein_89 | IS3 family transposase IS1203 | Transposase |
| OO816_RS27180 (89043) | 89043..89294 | - | 252 | Protein_90 | IS3 family transposase IS1203 | Transposase |
| OO816_RS27185 (89351) | 89351..90739 | + | 1389 | Protein_91 | Multifunctional conjugation protein TraI | Relaxase |
| OO816_RS27190 (90759) | 90759..91505 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| OO816_RS27195 (91564) | 91564..92424 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| OO816_RS27200 (92527) | 92527..93087 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| OO816_RS27205 (93220) | 93220..93432 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| OO816_RS27210 (93677) | 93677..94138 | + | 462 | WP_001233856.1 | thermonuclease family protein | - |
| OO816_RS27215 (94184) | 94184..94393 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| OO816_RS27220 (94431) | 94431..94769 | + | 339 | WP_000766796.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|