MGE detailed information
MGE type: Genomic_island MGE length: 18696 bp
Accession: NZ_AP026080 Location: 5400862..5419557 Organism: Escherichia coli strain F690 Replicon: chromosome
Accession: NZ_AP026080 Location: 5400862..5419557 Organism: Escherichia coli strain F690 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO857_RS26855 (5396007) | 5396007..5397185 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| OO857_RS26860 (5397253) | 5397253..5398095 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| OO857_RS26865 (5398361) | 5398361..5400550 | - | 2190 | WP_000535067.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| OO857_RS26870 (5400862) | 5400862..5401128 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| OO857_RS26875 (5401125) | 5401125..5401892 | - | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| OO857_RS26880 (5401902) | 5401902..5403053 | - | 1152 | WP_001301805.1 | double-cubane-cluster-containing anaerobic reductase | - |
| OO857_RS26885 (5403169) | 5403169..5404440 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| OO857_RS26890 (5404481) | 5404481..5405713 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| OO857_RS26895 (5406180) | 5406180..5407112 | + | 933 | WP_000181144.1 | Recombination-promoting nuclease RpnD | VF |
| OO857_RS26900 (5407355) | 5407355..5408767 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| OO857_RS26905 (5408944) | 5408944..5409108 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| OO857_RS26910 (5409205) | 5409205..5410086 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| OO857_RS26915 (5410134) | 5410134..5411297 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| OO857_RS26920 (5411344) | 5411344..5411685 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - (5411680) | 5411680..5411756 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5411680) | 5411680..5411756 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5411680) | 5411680..5411756 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5411680) | 5411680..5411756 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5411680) | 5411680..5411756 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5411680) | 5411680..5411756 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5411680) | 5411680..5411756 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5411680) | 5411680..5411756 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| OO857_RS26925 (5411906) | 5411906..5413660 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| OO857_RS26930 (5413660) | 5413660..5415129 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| OO857_RS26935 (5415196) | 5415196..5417628 | - | 2433 | WP_000819029.1 | DEAD/DEAH box helicase family protein | - |
| OO857_RS26940 (5417906) | 5417906..5418190 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| OO857_RS26945 (5418199) | 5418199..5419557 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| OO857_RS26950 (5419626) | 5419626..5420582 | - | 957 | WP_001297640.1 | GTPase | - |
| OO857_RS26955 (5420593) | 5420593..5420796 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| OO857_RS26960 (5420846) | 5420846..5422996 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| OO857_RS26965 (5423289) | 5423289..5423831 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |