MGE detailed information
MGE type: Prophage MGE length: 80480 bp
Accession: NZ_AP025551 Location: 3669960..3750439 Organism: Escherichia coli strain LR-50 Replicon: chromosome
Accession: NZ_AP025551 Location: 3669960..3750439 Organism: Escherichia coli strain LR-50 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE19_RS17760 (3665664) | 3665664..3666620 | + | 957 | WP_000121346.1 | molybdenum cofactor insertion chaperone PaoD | - |
| QUE19_RS17765 (3666671) | 3666671..3667009 | + | 339 | Protein_3478 | LysR substrate-binding domain-containing protein | - |
| QUE19_RS17770 (3667628) | 3667628..3669829 | + | 2202 | WP_286330823.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| QUE19_RS17775 (3670047) | 3670047..3670448 | - | 402 | Protein_3480 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| QUE19_RS17780 (3670511) | 3670511..3670876 | + | 366 | Protein_3481 | phage tail protein | - |
| QUE19_RS17785 (3670848) | 3670848..3671300 | + | 453 | WP_181137977.1 | tail fiber assembly protein | - |
| QUE19_RS17790 (3671272) | 3671272..3671880 | - | 609 | WP_078165802.1 | tail fiber assembly protein | - |
| QUE19_RS17795 (3671880) | 3671880..3672638 | - | 759 | WP_286330824.1 | phage tail protein | - |
| QUE19_RS17800 (3672642) | 3672642..3673226 | - | 585 | WP_000383556.1 | YmfQ family protein | - |
| QUE19_RS17805 (3673217) | 3673217..3674275 | - | 1059 | WP_000785312.1 | baseplate J/gp47 family protein | - |
| QUE19_RS17810 (3674262) | 3674262..3674687 | - | 426 | WP_000424732.1 | phage GP46 family protein | - |
| QUE19_RS17815 (3674687) | 3674687..3675235 | - | 549 | WP_001522208.1 | phage baseplate assembly protein V | - |
| QUE19_RS17820 (3675235) | 3675235..3676314 | - | 1080 | WP_000999510.1 | baseplate protein | - |
| QUE19_RS17825 (3676311) | 3676311..3677639 | - | 1329 | WP_286330825.1 | DNA circularization N-terminal domain-containing protein | - |
| QUE19_RS17830 (3677701) | 3677701..3678231 | - | 531 | WP_000679481.1 | hypothetical protein | - |
| QUE19_RS17835 (3678323) | 3678323..3680155 | - | 1833 | WP_029396355.1 | phage tail tape measure protein | - |
| QUE19_RS17840 (3680297) | 3680297..3680566 | - | 270 | WP_000661054.1 | phage tail assembly protein | - |
| QUE19_RS17845 (3680566) | 3680566..3680922 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| QUE19_RS17850 (3680922) | 3680922..3682418 | - | 1497 | WP_286330826.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| QUE19_RS17855 (3682402) | 3682402..3682572 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| QUE19_RS17860 (3682581) | 3682581..3683141 | - | 561 | WP_000779279.1 | hypothetical protein | - |
| QUE19_RS17865 (3683138) | 3683138..3683644 | - | 507 | WP_096970538.1 | hypothetical protein | - |
| QUE19_RS17870 (3683619) | 3683619..3684029 | - | 411 | WP_001570139.1 | phage head closure protein | - |
| QUE19_RS17875 (3684026) | 3684026..3684349 | - | 324 | WP_286330827.1 | head-tail connector protein | - |
| QUE19_RS17880 (3684352) | 3684352..3684552 | - | 201 | WP_001570140.1 | hypothetical protein | - |
| QUE19_RS17885 (3684602) | 3684602..3685807 | - | 1206 | WP_000257497.1 | phage major capsid protein | - |
| QUE19_RS17890 (3685822) | 3685822..3686472 | - | 651 | WP_001193633.1 | HK97 family phage prohead protease | - |
| QUE19_RS17895 (3686450) | 3686450..3687691 | - | 1242 | WP_000466255.1 | phage portal protein | - |
| QUE19_RS17900 (3687691) | 3687691..3687873 | - | 183 | WP_000605606.1 | protein YmfR | - |
| QUE19_RS17905 (3687885) | 3687885..3689618 | - | 1734 | WP_040074674.1 | terminase large subunit | - |
| QUE19_RS17910 (3689632) | 3689632..3690117 | - | 486 | WP_000929174.1 | phage terminase small subunit P27 family | - |
| QUE19_RS17915 (3690243) | 3690243..3690593 | - | 351 | WP_001135206.1 | HNH endonuclease signature motif containing protein | - |
| QUE19_RS17920 (3690659) | 3690659..3690862 | - | 204 | WP_000699783.1 | hypothetical protein | - |
| QUE19_RS17925 (3690980) | 3690980..3691354 | - | 375 | WP_029396337.1 | hypothetical protein | - |
| QUE19_RS17930 (3691393) | 3691393..3691836 | - | 444 | WP_089578276.1 | lysis protein | - |
| QUE19_RS17935 (3691833) | 3691833..3692309 | - | 477 | WP_029396339.1 | glycoside hydrolase family protein | - |
| QUE19_RS17940 (3692296) | 3692296..3692601 | - | 306 | WP_000544528.1 | phage holin family protein | - |
| QUE19_RS17945 (3692923) | 3692923..3693612 | - | 690 | WP_029396340.1 | bacteriophage antitermination protein Q | - |
| QUE19_RS17950 (3693609) | 3693609..3693749 | - | 141 | WP_001568558.1 | YlcG family protein | - |
| QUE19_RS17955 (3693746) | 3693746..3694108 | - | 363 | WP_032304795.1 | crossover junction endodeoxyribonuclease RusA | - |
| QUE19_RS17960 (3694105) | 3694105..3694395 | - | 291 | WP_000774473.1 | DUF1364 domain-containing protein | - |
| QUE19_RS17965 (3694388) | 3694388..3694558 | - | 171 | WP_000211034.1 | NinE family protein | - |
| QUE19_RS17970 (3694558) | 3694558..3695013 | - | 456 | WP_078341479.1 | DNA base-flipping protein YbcN | - |
| QUE19_RS17975 (3695010) | 3695010..3695078 | - | 69 | Protein_3520 | hypothetical protein | - |
| QUE19_RS17980 (3695199) | 3695199..3695786 | - | 588 | WP_029396318.1 | hypothetical protein | - |
| QUE19_RS17985 (3695773) | 3695773..3696029 | - | 257 | Protein_3522 | DNA polymerase III subunit theta | - |
| QUE19_RS17990 (3696064) | 3696064..3696264 | - | 201 | WP_024166776.1 | hypothetical protein | - |
| QUE19_RS17995 (3696427) | 3696427..3697035 | - | 609 | WP_024166775.1 | P22AR C-terminal domain-containing protein | - |
| QUE19_RS18000 (3697696) | 3697696..3699114 | + | 1419 | WP_096981006.1 | hypothetical protein | - |
| QUE19_RS18005 (3699166) | 3699166..3699420 | - | 255 | WP_001697053.1 | hypothetical protein | - |
| QUE19_RS18010 (3699485) | 3699485..3699772 | - | 288 | WP_121856626.1 | protein ren | - |
| QUE19_RS18015 (3699769) | 3699769..3700470 | - | 702 | WP_024228289.1 | replication protein P | - |
| QUE19_RS18020 (3700467) | 3700467..3701486 | - | 1020 | WP_077816076.1 | replication protein | - |
| QUE19_RS18025 (3701483) | 3701483..3702022 | - | 540 | WP_001400028.1 | toxin YdaT domain-containing protein | - |
| QUE19_RS18030 (3702053) | 3702053..3702280 | - | 228 | WP_000184665.1 | helix-turn-helix domain-containing protein | - |
| QUE19_RS18035 (3702391) | 3702391..3703083 | + | 693 | WP_024181969.1 | helix-turn-helix transcriptional regulator | - |
| QUE19_RS18040 (3703159) | 3703159..3703557 | + | 399 | WP_023307713.1 | hypothetical protein | - |
| QUE19_RS18045 (3703578) | 3703578..3703970 | + | 393 | WP_050583404.1 | hypothetical protein | - |
| QUE19_RS18050 (3704452) | 3704452..3704658 | + | 207 | WP_053286002.1 | cell division inhibitor protein | - |
| QUE19_RS18055 (3704734) | 3704734..3705030 | + | 297 | WP_000995441.1 | host-nuclease inhibitor Gam family protein | - |
| QUE19_RS18060 (3705036) | 3705036..3705821 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| QUE19_RS18065 (3705818) | 3705818..3706498 | + | 681 | WP_021571945.1 | YqaJ viral recombinase family protein | - |
| QUE19_RS18070 (3706495) | 3706495..3706677 | + | 183 | WP_000682311.1 | DUF1317 domain-containing protein | - |
| QUE19_RS18075 (3706650) | 3706650..3706841 | + | 192 | WP_000548531.1 | DUF1382 family protein | - |
| QUE19_RS18080 (3706918) | 3706918..3707133 | + | 216 | WP_000188870.1 | hypothetical protein | - |
| QUE19_RS18085 (3707232) | 3707232..3707450 | + | 219 | WP_000763385.1 | TraR/DksA family transcriptional regulator | - |
| QUE19_RS18090 (3707498) | 3707498..3707776 | + | 279 | WP_000488407.1 | DUF4222 domain-containing protein | - |
| QUE19_RS18095 (3707748) | 3707748..3708098 | + | 351 | WP_071784265.1 | helix-turn-helix domain-containing protein | - |
| QUE19_RS18100 (3708020) | 3708020..3709138 | + | 1119 | WP_223716396.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| QUE19_RS18110 (3709343) | 3709343..3710596 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QUE19_RS18115 (3710608) | 3710608..3711711 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| QUE19_RS18120 (3711999) | 3711999..3713054 | + | 1056 | WP_272471214.1 | phosphoporin PhoE | - |
| QUE19_RS18125 (3713093) | 3713093..3713494 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3714212) | 3714212..3714292 | - | 81 | NuclAT_11 | - | - |
| - (3714212) | 3714212..3714292 | - | 81 | NuclAT_11 | - | - |
| - (3714212) | 3714212..3714292 | - | 81 | NuclAT_11 | - | - |
| - (3714212) | 3714212..3714292 | - | 81 | NuclAT_11 | - | - |
| QUE19_RS18130 (3713552) | 3713552..3714796 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| QUE19_RS18135 (3714888) | 3714888..3715346 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| QUE19_RS18140 (3715607) | 3715607..3717064 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| QUE19_RS18145 (3717121) | 3717121..3717642 | - | 522 | Protein_3553 | peptide chain release factor H | - |
| QUE19_RS18150 (3717641) | 3717641..3717844 | - | 204 | Protein_3554 | RtcB family protein | - |
| QUE19_RS18155 (3718090) | 3718090..3718542 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| QUE19_RS18160 (3718552) | 3718552..3718950 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| QUE19_RS18165 (3718953) | 3718953..3719246 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| QUE19_RS18170 (3719298) | 3719298..3720353 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| QUE19_RS18175 (3720424) | 3720424..3721209 | - | 786 | WP_000207564.1 | Chemotaxis protein LafU | VF |
| QUE19_RS18180 (3721181) | 3721181..3722893 | + | 1713 | Protein_3560 | Flagellar biosynthesis protein FlhA | VF |
| QUE19_RS18185 (3723117) | 3723117..3723614 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| QUE19_RS18190 (3723790) | 3723790..3724563 | - | 774 | WP_001355630.1 | Murein DD-endopeptidase MepH | VF |
| QUE19_RS18195 (3724749) | 3724749..3725009 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| QUE19_RS18200 (3725012) | 3725012..3725281 | + | 270 | Protein_3564 | type II toxin-antitoxin system YafQ family toxin | - |
| QUE19_RS18205 (3725437) | 3725437..3726177 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| QUE19_RS18210 (3726148) | 3726148..3726915 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| QUE19_RS18215 (3727121) | 3727121..3727699 | - | 579 | WP_020239672.1 | Phosphoheptose isomerase | VF |
| QUE19_RS18220 (3727939) | 3727939..3730383 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| QUE19_RS18225 (3730426) | 3730426..3730872 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| QUE19_RS18230 (3731053) | 3731053..3731823 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| QUE19_RS18235 (3731864) | 3731864..3733000 | - | 1137 | WP_136699509.1 | ISAs1 family transposase ISEc1 | Transposase |
| QUE19_RS18240 (3733102) | 3733102..3733799 | + | 698 | WP_230139102.1 | IS1 family transposase IS1R | Transposase |
| QUE19_RS18245 (3733934) | 3733934..3734719 | - | 786 | WP_001086141.1 | lipoprotein | - |
| QUE19_RS18255 (3735256) | 3735256..3735987 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| QUE19_RS18260 (3736052) | 3736052..3736519 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| QUE19_RS18265 (3736516) | 3736516..3737238 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| QUE19_RS18270 (3737272) | 3737272..3738027 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| QUE19_RS18275 (3738099) | 3738099..3739457 | + | 1359 | WP_000644685.1 | Membrane-bound lytic murein transglycosylase D | VF |
| QUE19_RS18280 (3739505) | 3739505..3740101 | - | 597 | Protein_3579 | methyltransferase domain-containing protein | - |
| QUE19_RS18285 (3740132) | 3740132..3740932 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| QUE19_RS18290 (3741173) | 3741173..3742087 | + | 915 | WP_000648572.1 | HTH-type transcriptional regulator DmlR | VF |
| QUE19_RS18295 (3742084) | 3742084..3742887 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
| QUE19_RS18330 (3748645) | 3748645..3749220 | - | 576 | WP_001140187.1 | D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase | VF |
| QUE19_RS18335 (3749408) | 3749408..3750439 | + | 1032 | WP_000594006.1 | Methionine import ATP-binding protein MetN | VF |
| QUE19_RS18340 (3750432) | 3750432..3751085 | + | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| QUE19_RS18345 (3751125) | 3751125..3751940 | + | 816 | WP_000874226.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| QUE19_RS18350 (3752058) | 3752058..3752462 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| QUE19_RS18355 (3752459) | 3752459..3753166 | + | 708 | WP_000094011.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| QUE19_RS18360 (3753278) | 3753278..3754996 | + | 1719 | WP_001260712.1 | proline--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|