NZ_AP0254781..237546

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 237546 bp
Accession: NZ_AP025478        Location: 1..237546         Organism: Vibrio crassostreae strain LMG 22240       Replicon: plasmid p1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OC193_RS24335 1..846 + 846 WP_048659318.1 hypothetical protein -
OC193_RS24340 1805..2083 + 279 WP_048659319.1 type II toxin-antitoxin system RelE/ParE family toxin -
OC193_RS24345 2083..2385 + 303 WP_048659320.1 HigA family addiction module antitoxin -
OC193_RS24350 2756..3310 + 555 WP_048666176.1 Tn3 family transposase TnpR_Tn3 Transposase
OC193_RS24355 3495..3764 + 270 WP_048666177.1 hypothetical protein -
OC193_RS24360 3897..4550 - 654 WP_048666178.1 class I SAM-dependent methyltransferase -
OC193_RS24365 5665..6234 + 570 WP_132957383.1 hypothetical protein -
OC193_RS24370 7107..7298 + 192 WP_048666181.1 DUF2158 domain-containing protein -
OC193_RS24375 7861..8250 + 390 Protein_8 IS6 family transposase ISSpu17 Transposase
OC193_RS24380 8298..9205 - 908 Protein_9 IS5 family transposase ISVa1 Transposase
OC193_RS24385 9282..9593 + 312 Protein_10 IS6 family transposase ISSba18 Transposase
OC193_RS24390 10527..10958 + 432 WP_048666184.1 hypothetical protein -
OC193_RS24395 11010..11495 + 486 WP_048666185.1 DNA repair protein RadC -
OC193_RS24400 11599..11928 + 330 WP_048666186.1 hypothetical protein -
OC193_RS24405 12629..12985 + 357 WP_048666187.1 hypothetical protein -
OC193_RS24410 13023..13409 + 387 WP_017100396.1 hypothetical protein -
OC193_RS24415 13488..13823 + 336 WP_048666188.1 hypothetical protein -
OC193_RS24420 13878..14321 + 444 WP_048666189.1 hypothetical protein VF
OC193_RS24425 14671..15804 + 1134 WP_230853856.1 site-specific integrase -
OC193_RS24430 15801..17096 + 1296 WP_048666191.1 tyrosine-type recombinase/integrase -
OC193_RS24435 17338..17802 - 465 WP_048666192.1 hypothetical protein -
OC193_RS24440 17795..18328 - 534 WP_048666193.1 type II toxin-antitoxin system MqsA family antitoxin -
OC193_RS24445 18339..18767 - 429 WP_048666194.1 hypothetical protein -
OC193_RS24450 18910..19506 - 597 WP_048666195.1 tyrosine-type recombinase/integrase -
OC193_RS24455 19617..21320 + 1704 WP_048666196.1 class I SAM-dependent DNA methyltransferase -
OC193_RS24460 21310..22557 + 1248 WP_080968097.1 restriction endonuclease subunit S -
OC193_RS24465 22550..23824 + 1275 WP_048666197.1 hypothetical protein -
OC193_RS24470 23910..25058 + 1149 WP_048666198.1 DUF4268 domain-containing protein -
OC193_RS24475 25055..28282 + 3228 WP_048666199.1 type I restriction endonuclease subunit R -
OC193_RS24480 28500..28905 - 406 Protein_29 transposase -
OC193_RS24485 29134..29301 + 168 WP_155411105.1 darobactin family peptide antibiotic -
OC193_RS24490 29530..31836 + 2307 WP_048666200.1 darobactin export ABC transporter permease subunit -
OC193_RS24495 31839..33077 + 1239 WP_048666201.1 efflux RND transporter periplasmic adaptor subunit -
OC193_RS24500 33079..33744 + 666 WP_017100164.1 putative ABC transporter ATP-binding protein VF
OC193_RS24505 33754..35046 + 1293 WP_048666202.1 darobactin maturation radical SAM/SPASM protein DarE -
OC193_RS24510 35056..36777 + 1722 WP_048666203.1 ABC transporter ATP-binding protein -
OC193_RS24515 36949..38135 - 1187 Protein_36 IS1634 family transposase -
OC193_RS24520 38864..39223 + 360 WP_048666204.1 hypothetical protein -
OC193_RS24525 39241..45018 - 5778 WP_048666205.1 Multifunctional conjugation protein TraI Relaxase
OC193_RS24530 45799..46320 + 522 WP_048667455.1 hypothetical protein -
OC193_RS24535 46339..46782 + 444 WP_048666207.1 type II toxin-antitoxin system YafO family toxin -
OC193_RS24540 46989..49088 - 2100 WP_048666208.1 type IV conjugative transfer system coupling protein TraD -
OC193_RS24545 49805..50830 - 1026 WP_048666209.1 hypothetical protein -
OC193_RS24550 51300..51830 - 531 WP_048666210.1 hypothetical protein -
OC193_RS24555 51914..54727 - 2814 WP_048666211.1 conjugal transfer mating-pair stabilization protein TraG -
OC193_RS24560 54731..56137 - 1407 WP_048666212.1 conjugal transfer protein TraH -
OC193_RS24565 56134..56547 - 414 WP_048666213.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
OC193_RS24570 56722..57507 - 786 WP_080968098.1 type-F conjugative transfer system pilin assembly protein TraF -
OC193_RS24575 57531..59258 - 1728 WP_132957380.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
OC193_RS24580 59296..60009 - 714 WP_132970467.1 type-F conjugative transfer system pilin assembly protein TrbC -
OC193_RS24585 60263..61273 - 1011 WP_207895005.1 conjugal transfer pilus assembly protein TraU -
OC193_RS24590 61432..62163 - 732 WP_048660715.1 type-F conjugative transfer system protein TraW -
OC193_RS24595 62114..64663 - 2550 WP_132957374.1 type IV secretion system protein TraC -
OC193_RS24600 64814..65209 - 396 WP_017104313.1 type IV conjugative transfer system lipoprotein TraV -
OC193_RS24605 65206..66750 - 1545 WP_048666133.1 TrbI/VirB10 family protein -
OC193_RS24610 66740..67525 - 786 WP_017096434.1 type-F conjugative transfer system secretin TraK -
OC193_RS24615 67512..68087 - 576 WP_048666134.1 type IV conjugative transfer system protein TraE -
OC193_RS24620 68102..68404 - 303 WP_048666135.1 type IV conjugative transfer system protein TraL -
OC193_RS24625 68414..68701 - 288 WP_016800088.1 type IV conjugative transfer system pilin TraA -
OC193_RS24630 68877..69245 - 369 WP_048660709.1 hypothetical protein -
OC193_RS24635 69589..69714 - 126 WP_244155004.1 TraY domain-containing protein -
OC193_RS24640 70583..71416 + 834 WP_048666136.1 hypothetical protein -
OC193_RS24645 72139..73089 + 951 WP_207895004.1 hypothetical protein -
OC193_RS24650 73344..75140 + 1797 WP_048660704.1 FAD/NAD(P)-binding protein -
OC193_RS24655 75163..76341 + 1179 WP_048660703.1 YbfB/YjiJ family MFS transporter -
OC193_RS24660 76446..80726 - 4281 WP_162200895.1 beta-prism lectin domain-containing protein -
OC193_RS24665 81812..83314 + 1503 WP_182796496.1 EAL domain-containing protein -
OC193_RS24670 84288..85076 + 789 WP_048660699.1 hypothetical protein -
OC193_RS24675 85794..87086 + 1293 WP_048666138.1 hypothetical protein -
OC193_RS24680 87755..88324 + 570 WP_048666139.1 DUF2913 family protein -
OC193_RS24685 88617..89741 + 1125 WP_048666140.1 ABC transporter substrate-binding protein -
OC193_RS24690 89734..90798 + 1065 WP_048666141.1 putative ABC transporter permease protein VF
OC193_RS24695 90798..91565 + 768 WP_048660693.1 Hemin import ATP-binding protein HmuV VF
OC193_RS24700 91574..92353 + 780 WP_080967720.1 nicotianamine synthase family protein -
OC193_RS24705 92350..93624 + 1275 WP_048660692.1 opine metallophore biosynthesis dehydrogenase -
OC193_RS24710 93636..94481 + 846 WP_048666142.1 DMT family transporter -
OC193_RS24715 95068..99555 + 4488 WP_261978811.1 Ig-like domain-containing protein -
OC193_RS24720 100024..100680 - 657 WP_048660688.1 hypothetical protein -
OC193_RS24725 100755..102485 - 1731 WP_132957368.1 hypothetical protein -
OC193_RS24730 102988..103380 + 393 WP_048613761.1 Rid family detoxifying hydrolase -
OC193_RS24735 103678..104103 + 426 WP_230682289.1 hypothetical protein -
OC193_RS24740 104186..104275 + 90 Protein_81 type II toxin-antitoxin system RelE/ParE family toxin -
OC193_RS24745 104393..105673 - 1281 WP_048663234.1 aromatic amino acid transporter -
OC193_RS24750 105894..106532 - 639 WP_048613766.1 ParB/RepB/Spo0J family partition protein -
OC193_RS24755 106522..107763 - 1242 WP_048613768.1 DUF3440 domain-containing protein -
OC193_RS24760 107928..109058 - 1131 WP_048660684.1 carbohydrate porin -
OC193_RS24765 109287..110486 + 1200 WP_048613773.1 Plasmid partition protein A VF
OC193_RS24770 110486..111559 + 1074 WP_048613775.1 ParB family protein -
OC193_RS24775 111861..112493 - 633 WP_048613777.1 LysE family translocator -
OC193_RS24780 113220..113861 + 642 WP_048660682.1 winged helix-turn-helix domain-containing protein -
OC193_RS24785 113913..115361 - 1449 WP_261978812.1 tryptophanase -
OC193_RS24790 116112..116540 + 429 WP_048613782.1 GNAT family N-acetyltransferase -
OC193_RS24795 116684..117490 - 807 Protein_92 integrase core domain-containing protein -
OC193_RS24800 117779..118707 + 929 Protein_93 IS110 family transposase ISVisp6 Transposase
OC193_RS24805 119004..119236 - 233 Protein_94 hypothetical protein -
OC193_RS24810 119650..119772 - 123 WP_259739813.1 hypothetical protein -
OC193_RS24815 121481..122506 + 1026 WP_048660681.1 hypothetical protein -
OC193_RS24820 122503..123417 + 915 WP_048660680.1 AAA family ATPase -
OC193_RS24825 123599..124072 + 474 WP_230690977.1 recombinase family protein -
OC193_RS24830 124076..124378 - 303 WP_017061973.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
OC193_RS24835 124378..124638 - 261 WP_017061972.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
OC193_RS24840 124854..125411 + 558 WP_048659321.1 Tn3 family transposase TnpR_Tn3 Transposase
OC193_RS24845 125583..125903 + 321 WP_080967496.1 type II toxin-antitoxin system RelE/ParE family toxin -
OC193_RS24850 125993..126292 + 300 WP_048659322.1 HigA family addiction module antitoxin -
OC193_RS24855 126461..127147 + 687 WP_048659323.1 IS6 family transposase ISSba18 Transposase
OC193_RS24860 127722..128069 - 348 WP_230682258.1 hypothetical protein -
OC193_RS24865 128069..128257 - 189 WP_048659324.1 hypothetical protein -
OC193_RS24870 128374..128610 + 237 WP_048659326.1 hypothetical protein -
OC193_RS24875 128621..128794 + 174 WP_162200897.1 hypothetical protein -
OC193_RS24880 129031..130008 + 978 WP_048659328.1 IS481 family transposase ISVch1 Transposase
OC193_RS24885 130174..130755 - 582 WP_048659329.1 DUF2913 family protein -
OC193_RS24890 131018..131815 + 798 WP_048659330.1 ParA family protein -
OC193_RS24895 131812..132786 + 975 WP_048659331.1 ParB/RepB/Spo0J family partition protein -
OC193_RS24900 132950..133180 + 231 WP_230682259.1 hypothetical protein -
OC193_RS24905 133360..133731 + 372 WP_048659333.1 hypothetical protein -
OC193_RS24910 133754..133906 + 153 WP_155407273.1 hypothetical protein -
OC193_RS24915 134089..134856 + 768 Protein_116 IS481 family transposase ISVch1 Transposase
OC193_RS24920 134939..136474 - 1536 Protein_117 IS3 family transposase -
OC193_RS24925 136562..136777 + 216 Protein_118 integrase core domain-containing protein -
OC193_RS24930 136705..137175 + 471 WP_053083642.1 hypothetical protein -
OC193_RS24935 137854..138330 + 477 WP_048659354.1 hypothetical protein -
OC193_RS24940 138345..138794 + 450 WP_048659355.1 hypothetical protein -
OC193_RS24945 138807..139103 + 297 WP_048659356.1 hypothetical protein -
OC193_RS24950 139139..139816 + 678 WP_230682262.1 DGQHR domain-containing protein -
OC193_RS24955 139782..140159 + 378 WP_230682263.1 hypothetical protein -
OC193_RS24960 140484..140876 + 393 WP_261978813.1 DNA repair protein RadC -
OC193_RS24965 141363..141650 + 288 WP_048659360.1 IS66 family transposase ISNpe25 Transposase
OC193_RS24970 141779..142018 + 240 Protein_127 hypothetical protein -
OC193_RS24975 142567..142689 + 123 WP_261978808.1 hypothetical protein -
OC193_RS24980 142731..143117 + 387 WP_048659361.1 hypothetical protein -
OC193_RS24985 143194..143529 + 336 WP_048659362.1 hypothetical protein -
OC193_RS24990 143585..144028 + 444 Protein_131 hypothetical protein VF
OC193_RS24995 144617..144976 + 360 WP_016790675.1 hypothetical protein -
OC193_RS25000 144995..150766 - 5772 WP_261978809.1 Multifunctional conjugation protein TraI Relaxase
OC193_RS25005 150860..152383 - 1524 WP_132785204.1 hypothetical protein -
OC193_RS25010 153001..155106 - 2106 WP_237300801.1 type IV conjugative transfer system coupling protein TraD -
OC193_RS25015 155588..155860 + 273 WP_048657775.1 helix-turn-helix domain-containing protein -
OC193_RS25020 156175..156762 + 588 WP_237300800.1 hypothetical protein -
OC193_RS25025 156937..158172 - 1236 WP_048657858.1 type II toxin-antitoxin system HipA family toxin -
OC193_RS25030 158165..158440 - 276 WP_048657864.1 helix-turn-helix transcriptional regulator -
OC193_RS25035 159104..159610 + 507 WP_048657859.1 AAA family ATPase -
OC193_RS25040 159934..160341 - 408 WP_132785188.1 hypothetical protein -
OC193_RS25045 160605..160769 - 165 WP_155407271.1 hypothetical protein -
OC193_RS25050 160826..161380 - 555 WP_048657861.1 hypothetical protein -
OC193_RS25055 161790..162275 - 486 WP_048657862.1 GrpB family protein -
OC193_RS25060 162516..162825 + 310 Protein_145 regulator -
OC193_RS25065 162987..163256 - 270 WP_048657863.1 hypothetical protein -
OC193_RS25070 163632..164168 - 537 WP_048666366.1 hypothetical protein -
OC193_RS25075 164252..167059 - 2808 WP_237300799.1 conjugal transfer mating-pair stabilization protein TraG -
OC193_RS25080 167063..168469 - 1407 WP_048661582.1 conjugal transfer protein TraH -
OC193_RS25085 168466..168879 - 414 WP_048661583.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
OC193_RS25090 168955..169740 - 786 WP_132974765.1 type-F conjugative transfer system pilin assembly protein TraF -
OC193_RS25095 169764..171491 - 1728 WP_237300798.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
OC193_RS25100 171528..172241 - 714 WP_171762886.1 type-F conjugative transfer system pilin assembly protein TrbC -
OC193_RS25105 172495..173505 - 1011 WP_048661614.1 conjugal transfer pilus assembly protein TraU -
OC193_RS25110 173665..174396 - 732 WP_080967333.1 type-F conjugative transfer system protein TraW -
OC193_RS25115 174347..176896 - 2550 WP_048669621.1 type IV secretion system protein TraC -
OC193_RS25120 177048..177443 - 396 WP_048657845.1 type IV conjugative transfer system lipoprotein TraV -
OC193_RS25125 177446..178984 - 1539 WP_048669620.1 TrbI/VirB10 family protein -
OC193_RS25130 178974..179759 - 786 WP_080967332.1 type-F conjugative transfer system secretin TraK -
OC193_RS25135 179746..180321 - 576 WP_048662546.1 type IV conjugative transfer system protein TraE -
OC193_RS25140 180336..180638 - 303 WP_048661540.1 type IV conjugative transfer system protein TraL -
OC193_RS25145 180648..180935 - 288 WP_048661539.1 type IV conjugative transfer system pilin TraA -
OC193_RS25150 181014..181379 - 366 WP_048661538.1 hypothetical protein -
OC193_RS25155 181724..181903 - 180 WP_048661537.1 TraY domain-containing protein -
OC193_RS25160 182700..183533 + 834 WP_048661255.1 hypothetical protein -
OC193_RS25165 184261..184812 + 552 WP_230682313.1 IS110 family transposase ISSpe4 Transposase
OC193_RS25170 185053..185226 - 174 Protein_167 group II intron reverse transcriptase/maturase -
OC193_RS25175 185225..185888 + 664 Protein_168 IS21 family transposase ISEc12 Transposase
OC193_RS25180 186034..189282 - 3249 WP_048666368.1 Ig-like domain-containing protein -
OC193_RS25185 189526..189815 + 290 Protein_170 transposase zinc-binding domain-containing protein -
OC193_RS25190 189832..190446 - 615 Protein_171 IS630 family transposase ISShfr2 Transposase
OC193_RS25195 190526..191446 + 921 WP_048661579.1 IS5 family transposase ISVba2 Transposase
OC193_RS25200 191659..191931 - 273 WP_230682325.1 IS630 family transposase ISSod10 Transposase
OC193_RS25205 191975..192788 + 814 Protein_174 transposase -
OC193_RS25210 192784..193732 - 949 Protein_175 IS481 family transposase ISVch1 Transposase
OC193_RS25215 193821..210383 - 16563 WP_261978810.1 Serralysin C VF
OC193_RS25220 210775..211148 - 374 Protein_177 IS1 family transposase -
OC193_RS25225 211231..211515 + 285 Protein_178 IS110 family transposase ISSod21 Transposase
OC193_RS25230 211596..212624 + 1029 WP_080967695.1 IS110 family transposase ISCARN80 Transposase
OC193_RS25235 212894..213790 - 897 Protein_180 IS5 family transposase -
OC193_RS25240 213871..214182 - 312 Protein_181 IS5 family transposase ISVa1 Transposase
OC193_RS25245 214444..216636 + 2193 WP_048659831.1 ATP-binding cassette domain-containing protein -
OC193_RS25250 216636..217940 + 1305 WP_048659830.1 HlyD family type I secretion periplasmic adaptor subunit -
OC193_RS25255 217979..219349 + 1371 WP_048659829.1 TolC family outer membrane protein -
OC193_RS25260 219346..219945 + 600 WP_048659828.1 Outer membrane porin F VF
OC193_RS25265 219996..222092 + 2097 WP_048659827.1 Autoinducer 2 sensor kinase/phosphatase LuxQ VF
OC193_RS25270 222154..222851 - 698 Protein_187 IS630 family transposase ISVa15 Transposase
OC193_RS25275 222930..224465 - 1536 Protein_188 IS3 family transposase -
OC193_RS25280 224576..224680 - 105 Protein_189 IS630 family transposase -
OC193_RS25285 224719..225753 - 1035 WP_261978814.1 IS66 family transposase ISAs21 Transposase
OC193_RS25290 225861..226781 - 921 WP_048661579.1 IS5 family transposase ISVba2 Transposase
OC193_RS25295 226907..228151 - 1245 WP_048659316.1 Phytochrome-like protein cph2 VF
OC193_RS25300 228132..232409 - 4278 WP_230682257.1 CHASE domain-containing protein -
OC193_RS25305 232750..234013 - 1264 Protein_194 IS4 family transposase -
OC193_RS25310 234204..235165 + 962 Protein_195 IS110 family transposase ISShwo3 Transposase
OC193_RS25315 235463..236288 - 826 Protein_196 IS5 family transposase -
OC193_RS25320 236396..236662 + 267 WP_162200896.1 transposase -
OC193_RS25325 236565..236918 + 354 WP_053083648.1 IS110 family transposase ISAve1 Transposase
OC193_RS25330 237040..237162 + 123 WP_080967499.1 DUF4113 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance