MGE detailed information
MGE type: Genomic_island MGE length: 40127 bp
Accession: NZ_AP025220 Location: 3715787..3755913 Organism: Escherichia coli strain 2017.11.01CC Replicon: chromosome
Accession: NZ_AP025220 Location: 3715787..3755913 Organism: Escherichia coli strain 2017.11.01CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH31_RS18055 (3713558) | 3713558..3714271 | - | 714 | WP_000119302.1 | hypothetical protein | - |
| LPH31_RS18060 (3714258) | 3714258..3715325 | - | 1068 | WP_001037132.1 | inovirus-type Gp2 protein | - |
| LPH31_RS18065 (3715447) | 3715447..3715665 | - | 219 | WP_000434497.1 | AlpA family phage regulatory protein | - |
| LPH31_RS18070 (3715787) | 3715787..3716644 | - | 858 | WP_000523418.1 | hypothetical protein | - |
| LPH31_RS18080 (3717061) | 3717061..3718314 | - | 1254 | WP_000893277.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LPH31_RS18085 (3718326) | 3718326..3719429 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LPH31_RS18090 (3719717) | 3719717..3720772 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| LPH31_RS18095 (3720811) | 3720811..3721212 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3721930) | 3721930..3722010 | - | 81 | NuclAT_13 | - | - |
| - (3721930) | 3721930..3722010 | - | 81 | NuclAT_13 | - | - |
| - (3721930) | 3721930..3722010 | - | 81 | NuclAT_13 | - | - |
| - (3721930) | 3721930..3722010 | - | 81 | NuclAT_13 | - | - |
| LPH31_RS18100 (3721270) | 3721270..3722514 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| LPH31_RS18105 (3722606) | 3722606..3723064 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LPH31_RS18110 (3723325) | 3723325..3724782 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| LPH31_RS18115 (3724839) | 3724839..3725360 | - | 522 | Protein_3558 | peptide chain release factor H | - |
| LPH31_RS18120 (3725359) | 3725359..3725562 | - | 204 | Protein_3559 | RNA ligase RtcB family protein | - |
| LPH31_RS18125 (3725808) | 3725808..3726260 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| LPH31_RS18130 (3726270) | 3726270..3726668 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LPH31_RS18135 (3726671) | 3726671..3726964 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LPH31_RS18140 (3727016) | 3727016..3728071 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| LPH31_RS18145 (3728142) | 3728142..3728927 | - | 786 | WP_000207564.1 | Chemotaxis protein LafU | VF |
| LPH31_RS18150 (3728899) | 3728899..3730611 | + | 1713 | Protein_3565 | Flagellar biosynthesis protein FlhA | VF |
| LPH31_RS18155 (3730835) | 3730835..3731332 | - | 498 | WP_072778518.1 | REP-associated tyrosine transposase RayT | - |
| LPH31_RS18160 (3731508) | 3731508..3732281 | - | 774 | WP_124848757.1 | Murein DD-endopeptidase MepH | VF |
| LPH31_RS18165 (3732467) | 3732467..3732727 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| LPH31_RS18170 (3732730) | 3732730..3732999 | + | 270 | Protein_3569 | type II toxin-antitoxin system YafQ family toxin | - |
| LPH31_RS18175 (3733155) | 3733155..3733895 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| LPH31_RS18180 (3733866) | 3733866..3734633 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| LPH31_RS18185 (3734839) | 3734839..3735417 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| LPH31_RS18190 (3735657) | 3735657..3738101 | + | 2445 | WP_088550566.1 | Acyl-coenzyme A dehydrogenase | VF |
| LPH31_RS18195 (3738144) | 3738144..3738590 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| LPH31_RS18200 (3738771) | 3738771..3739541 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| LPH31_RS18205 (3739582) | 3739582..3740718 | - | 1137 | WP_000420721.1 | ISAs1 family transposase ISEc1 | Transposase |
| LPH31_RS18210 (3741187) | 3741187..3741564 | - | 378 | WP_001077738.1 | hypothetical protein | - |
| LPH31_RS18215 (3741564) | 3741564..3743282 | - | 1719 | Protein_3578 | Protein RhsD | VF |
| LPH31_RS18220 (3743248) | 3743248..3743406 | + | 159 | Protein_3579 | Protein RhsD | VF |
| LPH31_RS18225 (3743411) | 3743411..3744823 | + | 1413 | WP_001240525.1 | hypothetical protein | VF |
| LPH31_RS18230 (3744932) | 3744932..3748366 | + | 3435 | WP_124848777.1 | hypothetical protein | VF |
| LPH31_RS18235 (3748377) | 3748377..3749826 | + | 1450 | Protein_3582 | hypothetical protein | VF |
| LPH31_RS18240 (3749753) | 3749753..3750235 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| LPH31_RS18245 (3750279) | 3750279..3751194 | + | 916 | Protein_3584 | hypothetical protein | - |
| LPH31_RS18250 (3751204) | 3751204..3751683 | + | 480 | WP_072778509.1 | protein YkfM | - |
| LPH31_RS18255 (3751820) | 3751820..3752605 | - | 786 | WP_001086141.1 | lipoprotein | - |
| LPH31_RS18265 (3753142) | 3753142..3753873 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| LPH31_RS18270 (3753938) | 3753938..3754405 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| LPH31_RS18275 (3754402) | 3754402..3755124 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| LPH31_RS18280 (3755158) | 3755158..3755913 | + | 756 | WP_001052709.1 | hydroxyacylglutathione hydrolase | - |
| LPH31_RS18285 (3755985) | 3755985..3757343 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| LPH31_RS18290 (3757391) | 3757391..3757987 | - | 597 | Protein_3592 | methyltransferase domain-containing protein | - |
| LPH31_RS18295 (3758018) | 3758018..3758818 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| LPH31_RS18300 (3759059) | 3759059..3759973 | + | 915 | WP_229430198.1 | DNA-binding transcriptional regulator YafC | - |
| LPH31_RS18305 (3759970) | 3759970..3760773 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|