MGE detailed information
MGE type: Genomic_island MGE length: 11455 bp
Accession: NZ_AP024521 Location: 3467810..3479264 Organism: Escherichia coli strain E189 Replicon: chromosome
Accession: NZ_AP024521 Location: 3467810..3479264 Organism: Escherichia coli strain E189 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO00_RS16700 (3464135) | 3464135..3465343 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| LDO00_RS16705 (3465369) | 3465369..3466700 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| LDO00_RS16710 (3466722) | 3466722..3467711 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| LDO00_RS16715 (3467810) | 3467810..3468748 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| LDO00_RS16720 (3469063) | 3469063..3469281 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| LDO00_RS16725 (3469537) | 3469537..3470076 | + | 540 | WP_000675743.1 | protein YhaB | - |
| LDO00_RS16730 (3470098) | 3470098..3471285 | + | 1188 | WP_024166578.1 | YhaC family protein | - |
| LDO00_RS16740 (3472089) | 3472089..3473234 | - | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| LDO00_RS16745 (3473331) | 3473331..3474221 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| LDO00_RS16750 (3474251) | 3474251..3475021 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| LDO00_RS16755 (3475037) | 3475037..3476371 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| LDO00_RS16760 (3476746) | 3476746..3478317 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| LDO00_RS16765 (3478465) | 3478465..3478800 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| LDO00_RS16770 (3478800) | 3478800..3479264 | + | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| LDO00_RS16775 (3479319) | 3479319..3480128 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| LDO00_RS16780 (3480377) | 3480377..3481657 | + | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| LDO00_RS16785 (3481680) | 3481680..3482153 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| LDO00_RS16790 (3482164) | 3482164..3482943 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| LDO00_RS16795 (3482933) | 3482933..3483811 | + | 879 | WP_001298758.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| LDO00_RS16800 (3483829) | 3483829..3484263 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|