MGE detailed information
MGE type: Genomic_island MGE length: 11455 bp
Accession: NZ_AP024518 Location: 3467747..3479201 Organism: Escherichia coli strain E148 Replicon: chromosome
Accession: NZ_AP024518 Location: 3467747..3479201 Organism: Escherichia coli strain E148 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDN98_RS16715 (3464072) | 3464072..3465280 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| LDN98_RS16720 (3465306) | 3465306..3466637 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| LDN98_RS16725 (3466659) | 3466659..3467648 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| LDN98_RS16730 (3467747) | 3467747..3468685 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| LDN98_RS16735 (3469000) | 3469000..3469218 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| LDN98_RS16740 (3469474) | 3469474..3470013 | + | 540 | WP_000675743.1 | protein YhaB | - |
| LDN98_RS16745 (3470035) | 3470035..3471222 | + | 1188 | WP_024166578.1 | YhaC family protein | - |
| LDN98_RS16755 (3472026) | 3472026..3473171 | - | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| LDN98_RS16760 (3473268) | 3473268..3474158 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| LDN98_RS16765 (3474188) | 3474188..3474958 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| LDN98_RS16770 (3474974) | 3474974..3476308 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| LDN98_RS16775 (3476683) | 3476683..3478254 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| LDN98_RS16780 (3478402) | 3478402..3478737 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| LDN98_RS16785 (3478737) | 3478737..3479201 | + | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| LDN98_RS16790 (3479256) | 3479256..3480065 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| LDN98_RS16795 (3480314) | 3480314..3481594 | + | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| LDN98_RS16800 (3481617) | 3481617..3482090 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| LDN98_RS16805 (3482101) | 3482101..3482880 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| LDN98_RS16810 (3482870) | 3482870..3483748 | + | 879 | WP_001298758.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| LDN98_RS16815 (3483766) | 3483766..3484200 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|