MGE detailed information
MGE type: Conjugative plasmid MGE length: 94179 bp
Accession: NZ_AP024117 Location: 1..94179 Organism: Escherichia coli strain JML285 Replicon: plasmid JML285_P3
Accession: NZ_AP024117 Location: 1..94179 Organism: Escherichia coli strain JML285 Replicon: plasmid JML285_P3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFF71_RS25135 (HmCmsJML285_4952) | 1..873 | + | 873 | WP_000729440.1 | incFII family plasmid replication initiator RepA | - |
| FFF71_RS25140 (HmCmsJML285_4953) | 1778..2062 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| FFF71_RS25145 (HmCmsJML285_4954) | 2062..2337 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FFF71_RS25150 (HmCmsJML285_4955) | 2387..4000 | - | 1614 | WP_040073582.1 | IS66 family transposase ISEc23 | Transposase |
| FFF71_RS25155 (HmCmsJML285_4956) | 4031..4381 | - | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| FFF71_RS25160 (HmCmsJML285_4957) | 4378..4740 | - | 363 | WP_001438809.1 | IS66 family transposase IS682 | Transposase |
| FFF71_RS25165 (HmCmsJML285_4958) | 4985..5188 | + | 204 | Protein_6 | hypothetical protein | - |
| FFF71_RS25170 (HmCmsJML285_4959) | 5457..5723 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| FFF71_RS25180 (HmCmsJML285_4960) | 5961..6563 | - | 603 | WP_000517694.1 | ProQ/FINO family protein | - |
| FFF71_RS25185 (HmCmsJML285_4961) | 6917..8263 | + | 1347 | WP_001132022.1 | protein YagA | - |
| FFF71_RS25190 (HmCmsJML285_4962) | 8790..9092 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| FFF71_RS25195 (HmCmsJML285_4963) | 9089..9715 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| FFF71_RS25200 (HmCmsJML285_4964) | 9935..11206 | - | 1272 | WP_220571839.1 | Y-family DNA polymerase | - |
| FFF71_RS25205 (HmCmsJML285_4965) | 11206..11643 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FFF71_RS25210 (HmCmsJML285_4966) | 11640..11888 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| FFF71_RS25215 (HmCmsJML285_4967) | 12307..13209 | + | 903 | WP_001420745.1 | DUF1281 domain-containing protein | - |
| FFF71_RS25220 | 13213..13518 | + | 306 | WP_032170510.1 | hypothetical protein | - |
| FFF71_RS25225 (HmCmsJML285_4968) | 13594..14277 | + | 684 | WP_000086137.1 | DNA methylase | - |
| FFF71_RS25230 (HmCmsJML285_4969) | 14278..14499 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| FFF71_RS25235 (HmCmsJML285_4970) | 14429..14947 | + | 519 | WP_223168556.1 | DUF1380 family protein | - |
| FFF71_RS25240 (HmCmsJML285_4971) | 14992..15762 | + | 771 | WP_001006204.1 | hypothetical protein | - |
| FFF71_RS25245 (HmCmsJML285_4973) | 16178..16603 | + | 426 | WP_001198900.1 | antirestriction protein | - |
| FFF71_RS25250 (HmCmsJML285_4974) | 16650..17072 | + | 423 | WP_000271688.1 | DUF1380 family protein | - |
| FFF71_RS25255 (HmCmsJML285_4975) | 17069..17260 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| FFF71_RS25260 | 17398..17679 | + | 282 | WP_154671919.1 | hypothetical protein | - |
| FFF71_RS25265 (HmCmsJML285_4976) | 18032..18559 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| FFF71_RS25270 (HmCmsJML285_4977) | 18617..18850 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| FFF71_RS25275 (HmCmsJML285_4978) | 18909..20867 | + | 1959 | WP_001145476.1 | ParB/RepB/Spo0J family partition protein | - |
| FFF71_RS25280 (HmCmsJML285_4979) | 20922..21356 | + | 435 | WP_000845903.1 | conjugation system SOS inhibitor PsiB | - |
| FFF71_RS25285 (HmCmsJML285_4980) | 21353..22072 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| FFF71_RS25290 (HmCmsJML285_4981) | 22069..22665 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| FFF71_RS25295 (HmCmsJML285_4983) | 23127..23627 | + | 501 | WP_000117631.1 | antirestriction protein ArdA | - |
| FFF71_RS25300 (HmCmsJML285_4984) | 24360..24794 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| FFF71_RS25305 (HmCmsJML285_4985) | 24887..25153 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| FFF71_RS25310 (HmCmsJML285_4986) | 25330..25719 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| FFF71_RS25315 (HmCmsJML285_4987) | 25716..26630 | + | 915 | WP_042089822.1 | hypothetical protein | VF |
| FFF71_RS25320 (HmCmsJML285_4988) | 26630..26875 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| FFF71_RS25325 (HmCmsJML285_4989) | 26906..27157 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| FFF71_RS25335 (HmCmsJML285_4990) | 27737..28585 | + | 849 | WP_001077033.1 | DUF4942 domain-containing protein | - |
| FFF71_RS25340 (HmCmsJML285_4991) | 28671..29006 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| FFF71_RS25345 (HmCmsJML285_4992) | 29239..29571 | + | 333 | WP_021511720.1 | plasmid mobilization protein MobA | - |
| FFF71_RS25350 (HmCmsJML285_4993) | 29583..32303 | + | 2721 | WP_000991407.1 | Protein TraI | Relaxase |
| FFF71_RS25355 (HmCmsJML285_4994) | 32524..34824 | - | 2301 | WP_137515364.1 | F-type conjugative transfer protein TrbC | - |
| FFF71_RS25360 (HmCmsJML285_4995) | 34805..35929 | - | 1125 | WP_032275061.1 | DsbC family protein | - |
| FFF71_RS25365 (HmCmsJML285_4996) | 35926..37188 | - | 1263 | WP_032275059.1 | IncI1-type conjugal transfer protein TrbA | - |
| FFF71_RS25370 (HmCmsJML285_4997) | 38050..39621 | - | 1572 | WP_021572172.1 | IS66 family transposase ISCro1 | Transposase |
| FFF71_RS25375 (HmCmsJML285_4998) | 39641..39988 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| FFF71_RS25380 (HmCmsJML285_4999) | 39988..40665 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| FFF71_RS25385 (HmCmsJML285_5001) | 41020..41211 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| FFF71_RS25390 (HmCmsJML285_5002) | 41221..41586 | - | 366 | WP_052918782.1 | hypothetical protein | - |
| FFF71_RS25395 (HmCmsJML285_5003) | 42230..42715 | - | 486 | WP_001563232.1 | thermonuclease family protein | - |
| FFF71_RS25400 (HmCmsJML285_5004) | 42864..43487 | + | 624 | WP_001158020.1 | hypothetical protein | - |
| FFF71_RS25405 | 43575..44030 | + | 456 | WP_016242775.1 | DUF2569 family protein | - |
| FFF71_RS25410 (HmCmsJML285_5005) | 44230..45765 | + | 1536 | WP_170989067.1 | phosphoethanolamine transferase | - |
| FFF71_RS25415 (HmCmsJML285_5006) | 45858..46100 | - | 243 | WP_001398505.1 | hypothetical protein | - |
| FFF71_RS25420 (HmCmsJML285_5007) | 46433..46585 | + | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| FFF71_RS25430 | 46899..47546 | - | 648 | WP_001563237.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| FFF71_RS25435 (HmCmsJML285_5009) | 47628..49787 | - | 2160 | WP_137515094.1 | DotA/TraY family protein | - |
| FFF71_RS25440 (HmCmsJML285_5010) | 49860..50429 | - | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| FFF71_RS25445 (HmCmsJML285_5011) | 50426..51631 | - | 1206 | WP_170989066.1 | conjugal transfer protein TraW | - |
| FFF71_RS25450 (HmCmsJML285_5012) | 51592..52209 | - | 618 | WP_000286857.1 | hypothetical protein | - |
| FFF71_RS25455 (HmCmsJML285_5013) | 52209..55253 | - | 3045 | WP_001024758.1 | conjugal transfer protein | - |
| FFF71_RS25460 | 55429..55812 | - | 384 | WP_011310086.1 | hypothetical protein | - |
| FFF71_RS25465 (HmCmsJML285_5014) | 55809..56168 | - | 360 | WP_000380400.1 | hypothetical protein | - |
| FFF71_RS25470 (HmCmsJML285_5015) | 56223..57041 | - | 819 | WP_148936877.1 | conjugal transfer protein TraT | - |
| FFF71_RS26045 | 57055..57207 | - | 153 | Protein_65 | TraS | - |
| FFF71_RS25480 (HmCmsJML285_5017) | 57264..57662 | - | 399 | WP_000086067.1 | hypothetical protein | - |
| FFF71_RS25485 (HmCmsJML285_5018) | 57711..58241 | - | 531 | WP_259402004.1 | conjugal transfer protein TraQ | - |
| FFF71_RS25490 (HmCmsJML285_5019) | 58238..58951 | - | 714 | WP_059330934.1 | conjugal transfer protein TraP | - |
| FFF71_RS25495 (HmCmsJML285_5020) | 58948..60279 | - | 1332 | WP_059330933.1 | conjugal transfer protein TraO | - |
| FFF71_RS25500 (HmCmsJML285_5021) | 60283..61257 | - | 975 | WP_059330932.1 | hypothetical protein | VF |
| FFF71_RS25505 (HmCmsJML285_5023) | 61268..61963 | - | 696 | WP_059330931.1 | DotI/IcmL family type IV secretion protein | - |
| FFF71_RS25510 (HmCmsJML285_5024) | 61975..62325 | - | 351 | WP_021532713.1 | hypothetical protein | - |
| FFF71_RS25515 (HmCmsJML285_5025) | 62342..66559 | - | 4218 | WP_059330930.1 | DUF5710 domain-containing protein | - |
| FFF71_RS25520 | 66913..67494 | - | 582 | WP_059330929.1 | hypothetical protein | - |
| FFF71_RS26050 | 67541..67701 | - | 161 | Protein_75 | hypothetical protein | - |
| FFF71_RS25525 (HmCmsJML285_5027) | 67726..68016 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| FFF71_RS25530 (HmCmsJML285_5028) | 68013..69161 | - | 1149 | WP_059330928.1 | putative protein YggR | VF |
| FFF71_RS25535 (HmCmsJML285_5029) | 69145..69981 | - | 837 | WP_059330927.1 | hypothetical protein | VF |
| FFF71_RS25540 (HmCmsJML285_5030) | 69978..70436 | - | 459 | WP_059330926.1 | DotD/TraH family lipoprotein | - |
| FFF71_RS25545 (HmCmsJML285_5031) | 70540..71742 | - | 1203 | WP_059330925.1 | conjugal transfer protein TraF | - |
| FFF71_RS25550 (HmCmsJML285_5032) | 71843..72667 | - | 825 | WP_137515093.1 | conjugal transfer protein TraE | - |
| FFF71_RS25555 (HmCmsJML285_5033) | 72929..73264 | + | 336 | WP_001368489.1 | hypothetical protein | - |
| FFF71_RS25560 (HmCmsJML285_5035) | 73694..73975 | - | 282 | WP_059330923.1 | hypothetical protein | - |
| FFF71_RS25565 (HmCmsJML285_5036) | 73992..75185 | - | 1194 | WP_059330922.1 | site-specific integrase | - |
| FFF71_RS26055 | 75509..75868 | - | 360 | WP_251361287.1 | hypothetical protein | - |
| FFF71_RS26060 | 76123..76671 | + | 549 | WP_244559717.1 | prepilin, shufflon protein A | - |
| FFF71_RS25580 (HmCmsJML285_5040) | 76676..78037 | - | 1362 | WP_059330921.1 | hypothetical protein | VF |
| FFF71_RS25585 (HmCmsJML285_5041) | 78055..78684 | - | 630 | WP_059330920.1 | prepilin peptidase | - |
| FFF71_RS25590 (HmCmsJML285_5042) | 78699..79184 | - | 486 | WP_059330919.1 | hypothetical protein | VF |
| FFF71_RS25595 (HmCmsJML285_5043) | 79229..79765 | - | 537 | WP_059330918.1 | hypothetical protein | VF |
| FFF71_RS25600 (HmCmsJML285_5044) | 79827..80921 | - | 1095 | WP_059330917.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| FFF71_RS25605 (HmCmsJML285_5045) | 80923..82431 | - | 1509 | WP_059330916.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| FFF71_RS25610 (HmCmsJML285_5046) | 82536..82994 | - | 459 | WP_059330915.1 | hypothetical protein | VF |
| FFF71_RS25615 (HmCmsJML285_5047) | 82984..84279 | - | 1296 | WP_059330914.1 | type 4b pilus protein PilO2 | - |
| FFF71_RS25620 (HmCmsJML285_5048) | 84300..85919 | - | 1620 | WP_059330913.1 | Outer membrane lipoprotein BfpB | VF |
| FFF71_RS25625 (HmCmsJML285_5049) | 85951..86388 | - | 438 | WP_059330912.1 | hypothetical protein | VF |
| FFF71_RS25630 (HmCmsJML285_5050) | 86392..87459 | - | 1068 | WP_059330911.1 | hypothetical protein | VF |
| FFF71_RS25635 | 87501..88004 | + | 504 | WP_234695379.1 | hypothetical protein | - |
| FFF71_RS25640 | 87997..88884 | - | 888 | WP_104807812.1 | hypothetical protein | - |
| FFF71_RS25645 (HmCmsJML285_5054) | 89888..90130 | - | 243 | WP_059330908.1 | PilI type IV pilus biogenesis protein | - |
| FFF71_RS25650 (HmCmsJML285_5055) | 90354..90719 | - | 366 | WP_059330907.1 | hypothetical protein | - |
| FFF71_RS25655 (HmCmsJML285_5056) | 90873..91082 | - | 210 | WP_234695377.1 | hypothetical protein | - |
| FFF71_RS25660 (HmCmsJML285_5057) | 91183..91773 | - | 591 | WP_059330906.1 | hypothetical protein | - |
| FFF71_RS25665 (HmCmsJML285_5058) | 92031..92696 | - | 666 | WP_059330905.1 | traC | - |
| FFF71_RS25670 | 92836..93342 | - | 507 | WP_001317510.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|