MGE detailed information
MGE type: Genomic_island MGE length: 24102 bp
Accession: NZ_AP024114 Location: 4236882..4260983 Organism: Escherichia coli strain JML285 Replicon: chromosome
Accession: NZ_AP024114 Location: 4236882..4260983 Organism: Escherichia coli strain JML285 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFF71_RS20325 (4234467) | 4234467..4235192 | - | 726 | WP_137515169.1 | type 1 fimbria chaperone FimC | - |
| FFF71_RS20330 (4235229) | 4235229..4235768 | - | 540 | WP_000824105.1 | fimbrial protein | - |
| FFF71_RS20335 (4235833) | 4235833..4236381 | - | 549 | WP_000695546.1 | type 1 fimbrial major subunit FimA | - |
| FFF71_RS20340 (4236882) | 4236882..4237478 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| FFF71_RS20345 (4237955) | 4237955..4238557 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| FFF71_RS20350 (4240013) | 4240013..4240729 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| FFF71_RS20355 (4240749) | 4240749..4241855 | + | 1107 | WP_039264345.1 | N-acetylneuraminate epimerase | - |
| FFF71_RS20360 (4241920) | 4241920..4242900 | + | 981 | WP_097412531.1 | sialate O-acetylesterase | - |
| FFF71_RS20365 (4242908) | 4242908..4243012 | - | 105 | Protein_3991 | HNH endonuclease | - |
| FFF71_RS20370 (4243112) | 4243112..4243984 | + | 873 | WP_024166640.1 | HNH endonuclease | - |
| FFF71_RS20375 (4244095) | 4244095..4245093 | - | 999 | WP_023155797.1 | hypothetical protein | - |
| FFF71_RS20380 (4245220) | 4245220..4246263 | - | 1044 | WP_023155796.1 | DUF2220 family protein | - |
| FFF71_RS20385 (4246288) | 4246288..4250724 | - | 4437 | WP_039264343.1 | hypothetical protein | - |
| FFF71_RS20390 (4250727) | 4250727..4251623 | - | 897 | WP_032214561.1 | hypothetical protein | - |
| FFF71_RS20395 (4251626) | 4251626..4252873 | - | 1248 | WP_259401999.1 | hypothetical protein | - |
| FFF71_RS20400 (4252988) | 4252988..4254010 | + | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| FFF71_RS20405 (4254007) | 4254007..4254789 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| FFF71_RS20410 (4254840) | 4254840..4255052 | - | 213 | WP_259402000.1 | hypothetical protein | - |
| FFF71_RS20415 (4255228) | 4255228..4256121 | + | 894 | WP_032214559.1 | WYL domain-containing protein | - |
| FFF71_RS20420 (4256319) | 4256319..4256517 | - | 199 | Protein_4002 | transposase | - |
| FFF71_RS20425 (4256640) | 4256640..4257419 | - | 780 | Protein_4003 | Prophage integrase IntA ; Integrase | Integrase |
| FFF71_RS20430 (4257886) | 4257886..4258035 | - | 150 | Protein_4004 | hypothetical protein | - |
| FFF71_RS20435 (4258120) | 4258120..4258317 | - | 198 | WP_000839235.1 | DUF957 domain-containing protein | - |
| FFF71_RS20440 (4258329) | 4258329..4258820 | - | 492 | WP_122986272.1 | DUF5983 family protein | - |
| FFF71_RS20445 (4258817) | 4258817..4259191 | - | 375 | WP_000854683.1 | TA system toxin CbtA family protein | Toxin Detail |
| FFF71_RS20450 (4259281) | 4259281..4259643 | - | 363 | WP_024186744.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FFF71_RS20455 (4259722) | 4259722..4259943 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| FFF71_RS20460 (4260006) | 4260006..4260482 | - | 477 | WP_001186710.1 | RadC family protein | - |
| FFF71_RS20465 (4260498) | 4260498..4260983 | - | 486 | WP_000206667.1 | antirestriction protein | - |
| FFF71_RS20470 (4261075) | 4261075..4261905 | - | 831 | WP_137515365.1 | DUF932 domain-containing protein | - |
| FFF71_RS20475 (4261920) | 4261920..4263491 | - | 1572 | WP_021572172.1 | IS66-like element ISCro1 family transposase | - |
| FFF71_RS20480 (4263511) | 4263511..4263858 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| FFF71_RS20485 (4263858) | 4263858..4264535 | - | 678 | WP_001339397.1 | IS66-like element accessory protein TnpA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|