MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 74814 bp
Accession: NZ_AP024112 Location: 890881..965694 Organism: Escherichia coli strain ECSC054 Replicon: chromosome
Accession: NZ_AP024112 Location: 890881..965694 Organism: Escherichia coli strain ECSC054 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FE985_RS04185 (887482) | 887482..888630 | - | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
| FE985_RS04190 (888702) | 888702..889685 | - | 984 | WP_001296394.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| FE985_RS04195 (890495) | 890495..890665 | - | 171 | Protein_830 | IS110 family transposase | - |
| FE985_RS04200 (891008) | 891008..891850 | - | 843 | Protein_831 | DUF4942 domain-containing protein | - |
| FE985_RS04205 (891935) | 891935..892129 | - | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| FE985_RS04210 (892208) | 892208..892357 | - | 150 | Protein_833 | DUF5983 family protein | - |
| FE985_RS04215 (892354) | 892354..892731 | - | 378 | WP_001564063.1 | TA system toxin CbtA family protein | Toxin Detail |
| FE985_RS04220 (892821) | 892821..893189 | - | 369 | WP_021553056.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FE985_RS04225 (893352) | 893352..893573 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| FE985_RS04230 (893638) | 893638..894114 | - | 477 | WP_021553055.1 | RadC family protein | - |
| FE985_RS04235 (894130) | 894130..894609 | - | 480 | WP_001564060.1 | antirestriction protein | - |
| FE985_RS04240 (894875) | 894875..895693 | - | 819 | WP_001564059.1 | DUF932 domain-containing protein | - |
| FE985_RS04245 (895783) | 895783..896016 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| FE985_RS04250 (896022) | 896022..896699 | - | 678 | WP_001564058.1 | hypothetical protein | - |
| FE985_RS04255 (896850) | 896850..897530 | - | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| FE985_RS04260 (897733) | 897733..898617 | - | 885 | WP_001564055.1 | YfjP family GTPase | - |
| FE985_RS04265 (898718) | 898718..899941 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| FE985_RS04270 (901104) | 901104..901634 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| FE985_RS04275 (902304) | 902304..903035 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| FE985_RS04280 (903556) | 903556..904008 | + | 453 | WP_000558152.1 | acyltransferase | - |
| FE985_RS04285 (904544) | 904544..905479 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| FE985_RS04290 (905472) | 905472..906407 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| FE985_RS04295 (906491) | 906491..907741 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| FE985_RS04300 (907760) | 907760..908854 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| FE985_RS04305 (910155) | 910155..910721 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| FE985_RS04310 (910979) | 910979..911554 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| FE985_RS04315 (911623) | 911623..911856 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| FE985_RS26000 (911853) | 911853..911978 | + | 126 | WP_001342704.1 | hypothetical protein | - |
| FE985_RS26005 (912107) | 912107..912169 | + | 63 | Protein_856 | IS3 family transposase IS2 | Transposase |
| FE985_RS04325 (912155) | 912155..912421 | - | 267 | Protein_857 | IS3 family transposase IS2 | Transposase |
| FE985_RS04330 (912512) | 912512..913669 | + | 1158 | Protein_858 | Multidrug resistance protein MexB | VF |
| FE985_RS04335 (913769) | 913769..914440 | + | 672 | WP_223350500.1 | TetR/AcrR family transcriptional regulator | - |
| FE985_RS26010 (914571) | 914571..914756 | + | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| FE985_RS04345 (915113) | 915113..915658 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| FE985_RS04350 (915703) | 915703..916854 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| FE985_RS04355 (916983) | 916983..918038 | - | 1056 | WP_001564046.1 | HTH-type transcriptional activator Btr | VF |
| FE985_RS04360 (918055) | 918055..919317 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| FE985_RS04365 (919933) | 919933..920415 | - | 483 | WP_001362989.1 | reverse transcriptase domain-containing protein | - |
| FE985_RS04370 (920482) | 920482..921021 | - | 540 | WP_001564045.1 | hypothetical protein | - |
| FE985_RS04375 (921507) | 921507..922412 | - | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| FE985_RS04380 (922549) | 922549..923466 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| FE985_RS04385 (923778) | 923778..924758 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| FE985_RS04390 (924804) | 924804..927326 | - | 2523 | WP_137445215.1 | glycyl radical diol dehydratase GrpM | - |
| FE985_RS04395 (927375) | 927375..927950 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| FE985_RS04400 (927961) | 927961..928260 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| FE985_RS04405 (928284) | 928284..929801 | - | 1518 | WP_000997839.1 | Aldehyde-alcohol dehydrogenase | VF |
| FE985_RS04410 (929862) | 929862..930647 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| FE985_RS04415 (930669) | 930669..930950 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| FE985_RS04420 (931235) | 931235..932431 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| FE985_RS04425 (932460) | 932460..932957 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| FE985_RS04430 (932985) | 932985..933254 | - | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| FE985_RS04435 (933266) | 933266..933991 | - | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| FE985_RS04440 (933975) | 933975..934733 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| FE985_RS04445 (934788) | 934788..935474 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| FE985_RS04450 (935614) | 935614..936732 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| FE985_RS04455 (937089) | 937089..937589 | + | 501 | Protein_883 | DNA-binding protein | - |
| FE985_RS04460 (937685) | 937685..937918 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| FE985_RS04465 (937971) | 937971..938162 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| FE985_RS04470 (938883) | 938883..939143 | + | 261 | Protein_886 | IS3 family transposase ISLad1 | Transposase |
| FE985_RS04475 (939286) | 939286..941031 | + | 1746 | WP_001564039.1 | NERD domain-containing protein/DEAD/DEAH box helicase | - |
| FE985_RS26015 (941187) | 941187..941373 | + | 187 | Protein_888 | hypothetical protein | - |
| FE985_RS26020 (941425) | 941425..942772 | + | 1348 | Protein_889 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| FE985_RS04490 (942889) | 942889..943533 | + | 645 | WP_024196335.1 | hypothetical protein | - |
| FE985_RS04495 (943674) | 943674..944906 | + | 1233 | WP_001564037.1 | phosphoadenosine phosphosulfate reductase | - |
| FE985_RS04500 (944891) | 944891..945529 | + | 639 | WP_001564035.1 | ParB N-terminal domain-containing protein | - |
| FE985_RS04505 (945608) | 945608..945877 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| FE985_RS04510 (945898) | 945898..946542 | + | 645 | WP_001564034.1 | hypothetical protein | - |
| FE985_RS04515 (946607) | 946607..946930 | + | 324 | WP_001564033.1 | hypothetical protein | - |
| FE985_RS04520 (946978) | 946978..947769 | - | 792 | Protein_896 | ATP-dependent helicase | - |
| FE985_RS04525 (947764) | 947764..948153 | + | 390 | Protein_897 | IS3 family transposase | - |
| FE985_RS26025 (948664) | 948664..948786 | + | 123 | WP_001406634.1 | hypothetical protein | - |
| FE985_RS04530 (948825) | 948825..950333 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| FE985_RS04535 (950417) | 950417..950896 | + | 480 | Protein_900 | IS3 family transposase IS629 | Transposase |
| FE985_RS26030 (950908) | 950908..951081 | + | 174 | Protein_901 | hypothetical protein | - |
| FE985_RS04540 (951094) | 951094..951351 | - | 258 | Protein_902 | IS3 family transposase IS911 | Transposase |
| FE985_RS04545 (951424) | 951424..951768 | - | 345 | Protein_903 | alcohol dehydrogenase catalytic domain-containing protein | - |
| FE985_RS04550 (952387) | 952387..953080 | - | 694 | Protein_904 | IS1 family transposase IS1N | Transposase |
| FE985_RS04555 (953333) | 953333..954802 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| FE985_RS04560 (954907) | 954907..957276 | + | 2370 | WP_000671170.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| FE985_RS04565 (957351) | 957351..958850 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| FE985_RS04570 (958993) | 958993..959690 | + | 698 | WP_224053098.1 | IS1 family transposase IS1S | Transposase |
| FE985_RS04575 (960157) | 960157..960708 | - | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| FE985_RS04580 (960875) | 960875..961666 | - | 792 | Protein_910 | IS3 family transposase | - |
| FE985_RS04590 (962910) | 962910..963953 | - | 1044 | WP_000147018.1 | hypothetical protein | - |
| FE985_RS04595 (964209) | 964209..965474 | - | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| FE985_RS04605 (965853) | 965853..966560 | - | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| FE985_RS04610 (966713) | 966713..966790 | + | 78 | WP_212734103.1 | hypothetical protein | - |
| FE985_RS04615 (966952) | 966952..969087 | + | 2136 | WP_001564026.1 | ornithine decarboxylase | - |
| FE985_RS04620 (969136) | 969136..970392 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|