MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 98309 bp
Accession: NZ_AP023233 Location: 1..98309 Organism: Escherichia coli strain YJ4 Replicon: plasmid pYJ4-b
Accession: NZ_AP023233 Location: 1..98309 Organism: Escherichia coli strain YJ4 Replicon: plasmid pYJ4-b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXS62_RS24265 () | 426..563 | - | 138 | WP_000123562.1 | hypothetical protein | - |
| HXS62_RS24270 () | 1013..1264 | + | 252 | WP_001377386.1 | DNA polymerase III subunit theta | - |
| HXS62_RS24275 () | 1431..2655 | + | 1225 | Protein_3 | ISL3 family transposase | - |
| HXS62_RS24280 () | 2716..3105 | + | 390 | WP_000506726.1 | DNA repair protein | - |
| HXS62_RS24285 () | 3178..3399 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HXS62_RS24290 () | 3399..3779 | + | 381 | WP_001216045.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| HXS62_RS24295 () | 3784..3963 | + | 180 | WP_000113019.1 | hypothetical protein | - |
| HXS62_RS24300 () | 3991..5034 | + | 1044 | WP_000648823.1 | DUF968 domain-containing protein | - |
| HXS62_RS24305 () | 5123..5575 | + | 453 | WP_001369802.1 | hypothetical protein | - |
| HXS62_RS24310 () | 5662..6855 | + | 1194 | WP_000219605.1 | terminase | - |
| HXS62_RS24315 () | 6855..8339 | + | 1485 | WP_000124155.1 | hypothetical protein | - |
| HXS62_RS24320 () | 8364..9215 | - | 852 | WP_000611656.1 | hypothetical protein | - |
| HXS62_RS24325 () | 9326..9535 | - | 210 | WP_000874154.1 | hypothetical protein | - |
| HXS62_RS24330 () | 10139..10360 | + | 222 | WP_000542336.1 | hypothetical protein | - |
| HXS62_RS24335 () | 10368..11399 | + | 1032 | WP_000067534.1 | site-specific integrase | - |
| HXS62_RS24340 () | 11450..11761 | + | 312 | WP_062914755.1 | hypothetical protein | - |
| HXS62_RS24345 () | 12007..12567 | + | 561 | WP_023156637.1 | Ref family protein | - |
| HXS62_RS24350 () | 12756..13397 | + | 642 | WP_023156639.1 | hypothetical protein | - |
| HXS62_RS24355 () | 13454..14761 | + | 1308 | WP_023156640.1 | SIR2 family protein | - |
| HXS62_RS24360 () | 14808..15056 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| HXS62_RS24365 () | 15053..15493 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| HXS62_RS24370 () | 15527..22294 | - | 6768 | WP_176486945.1 | N-6 DNA methylase | - |
| HXS62_RS24375 () | 22370..24079 | + | 1710 | WP_023153801.1 | hypothetical protein | - |
| HXS62_RS24380 () | 24072..25091 | + | 1020 | WP_023352830.1 | hypothetical protein | - |
| HXS62_RS24385 () | 25383..25940 | - | 558 | WP_001345478.1 | lysozyme | - |
| HXS62_RS24390 () | 26109..26597 | + | 489 | WP_023352831.1 | single-stranded DNA-binding protein | - |
| HXS62_RS24395 () | 26800..27588 | + | 789 | WP_023351931.1 | hypothetical protein | - |
| HXS62_RS24400 () | 27581..28675 | + | 1095 | WP_023352832.1 | hypothetical protein | - |
| HXS62_RS24405 () | 28707..29015 | - | 309 | WP_001165936.1 | hypothetical protein | - |
| HXS62_RS24410 () | 29005..31992 | - | 2988 | WP_062914757.1 | hypothetical protein | - |
| HXS62_RS24415 () | 32092..33300 | + | 1209 | WP_048218295.1 | transposase | - |
| HXS62_RS24420 () | 33340..33705 | - | 366 | WP_000175491.1 | hypothetical protein | - |
| HXS62_RS24425 () | 33702..35621 | - | 1920 | WP_048218296.1 | defense against restriction protein A | - |
| HXS62_RS24430 () | 35623..36225 | - | 603 | WP_001345482.1 | hypothetical protein | - |
| HXS62_RS24435 () | 36212..36655 | - | 444 | WP_000580776.1 | hypothetical protein | - |
| HXS62_RS24440 () | 36652..36981 | - | 330 | WP_000887652.1 | holin | - |
| HXS62_RS24445 () | 37056..37319 | - | 264 | WP_048218298.1 | hypothetical protein | - |
| HXS62_RS24450 () | 37755..38327 | - | 573 | WP_023351542.1 | recombinase family protein | - |
| HXS62_RS24455 () | 38358..38846 | + | 489 | WP_048218313.1 | phage tail protein | - |
| HXS62_RS24460 () | 38846..39448 | + | 603 | WP_048218300.1 | tail fiber assembly protein | - |
| HXS62_RS24465 () | 39420..39836 | - | 417 | WP_001032314.1 | tail fiber assembly protein | - |
| HXS62_RS24470 () | 39839..43060 | - | 3222 | WP_077879135.1 | tail fiber protein | - |
| HXS62_RS24475 () | 43072..43506 | - | 435 | WP_001286326.1 | hypothetical protein | - |
| HXS62_RS24480 () | 43585..44421 | - | 837 | WP_048218248.1 | hypothetical protein | - |
| HXS62_RS24485 () | 44421..45854 | - | 1434 | WP_062914759.1 | hypothetical protein | - |
| HXS62_RS24490 () | 45851..46207 | - | 357 | WP_000002800.1 | hypothetical protein | - |
| HXS62_RS24495 () | 46207..49902 | - | 3696 | WP_100183872.1 | transglycosylase SLT domain-containing protein | - |
| HXS62_RS24500 () | 49984..50865 | - | 882 | WP_176486946.1 | morphogenetic protein | - |
| HXS62_RS24505 () | 50880..51491 | - | 612 | WP_000523980.1 | hypothetical protein | - |
| HXS62_RS24510 () | 51502..52068 | - | 567 | WP_023153778.1 | hypothetical protein | - |
| HXS62_RS24515 () | 52299..53192 | + | 894 | WP_032192786.1 | DUF4760 domain-containing protein | - |
| HXS62_RS24520 () | 53244..53720 | - | 477 | WP_001057312.1 | hypothetical protein | - |
| HXS62_RS24525 () | 53743..54093 | - | 351 | WP_000093548.1 | hypothetical protein | - |
| HXS62_RS24530 () | 54452..54571 | + | 120 | WP_001396852.1 | ash family protein | - |
| HXS62_RS24535 () | 54590..54811 | + | 222 | WP_071550046.1 | host cell division inhibitor Icd-like protein | - |
| HXS62_RS24540 () | 54808..55899 | + | 1092 | WP_033560573.1 | phage antirepressor KilAC domain-containing protein | - |
| HXS62_RS24545 () | 56064..56864 | + | 801 | WP_001187875.1 | phage antirepressor KilAC domain-containing protein | - |
| HXS62_RS24550 () | 56894..57739 | + | 846 | WP_062914760.1 | hypothetical protein | - |
| HXS62_RS24555 () | 58004..59059 | + | 1056 | WP_052761440.1 | ParA family protein | - |
| HXS62_RS24560 () | 59129..59416 | - | 288 | WP_001561122.1 | DUF3892 domain-containing protein | - |
| HXS62_RS24565 () | 59706..60302 | - | 597 | WP_053896077.1 | hypothetical protein | - |
| HXS62_RS24570 () | 60474..60983 | - | 510 | WP_000509939.1 | hypothetical protein | - |
| HXS62_RS24575 () | 60995..61576 | - | 582 | WP_000035251.1 | hypothetical protein | - |
| HXS62_RS24580 () | 61612..62427 | - | 816 | WP_062914761.1 | hypothetical protein | - |
| HXS62_RS24585 () | 62437..64026 | - | 1590 | WP_062914762.1 | hypothetical protein | - |
| HXS62_RS24590 () | 64087..65793 | - | 1707 | WP_023153705.1 | hypothetical protein | - |
| HXS62_RS24595 () | 66020..67021 | - | 1002 | WP_053903354.1 | ParB/RepB/Spo0J family partition protein | - |
| HXS62_RS24600 () | 67038..68234 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| HXS62_RS24605 () | 68792..69652 | - | 861 | WP_001076427.1 | replication protein RepA | - |
| HXS62_RS24610 () | 69979..70380 | - | 402 | WP_000458377.1 | hypothetical protein | - |
| HXS62_RS24615 () | 70451..70810 | - | 360 | WP_001281923.1 | hypothetical protein | - |
| HXS62_RS24620 () | 70988..71410 | - | 423 | WP_000007769.1 | hypothetical protein | - |
| HXS62_RS24625 () | 71450..72238 | - | 789 | WP_048218262.1 | hypothetical protein | - |
| HXS62_RS24630 () | 72700..72984 | + | 285 | WP_001177862.1 | hypothetical protein | - |
| HXS62_RS24635 () | 72977..73882 | + | 906 | WP_000472529.1 | recombination-associated protein RdgC | - |
| HXS62_RS24640 () | 73879..76143 | + | 2265 | WP_062914763.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| HXS62_RS24655 () | 78118..78945 | + | 828 | WP_000751808.1 | hypothetical protein | - |
| HXS62_RS24665 () | 79335..80699 | + | 1365 | WP_001276603.1 | replicative DNA helicase | - |
| HXS62_RS24670 () | 80699..81697 | + | 999 | WP_001198652.1 | hypothetical protein | - |
| HXS62_RS24675 () | 81744..82376 | - | 633 | WP_000535208.1 | hypothetical protein | - |
| HXS62_RS24680 () | 82369..83385 | - | 1017 | WP_023153696.1 | hypothetical protein | - |
| HXS62_RS24685 () | 83387..84172 | - | 786 | WP_000602719.1 | hypothetical protein | - |
| HXS62_RS24690 () | 84159..84887 | - | 729 | WP_000896801.1 | hypothetical protein | - |
| HXS62_RS24695 () | 84891..86108 | - | 1218 | WP_001141908.1 | hypothetical protein | - |
| HXS62_RS24700 () | 86118..86495 | - | 378 | WP_000235786.1 | hypothetical protein | - |
| HXS62_RS24705 () | 86642..86887 | + | 246 | WP_000840931.1 | hypothetical protein | - |
| HXS62_RS24710 () | 86890..87468 | + | 579 | WP_000943607.1 | VRR-NUC domain-containing protein | - |
| HXS62_RS24715 () | 87535..87690 | + | 156 | WP_000096174.1 | hypothetical protein | - |
| HXS62_RS24720 () | 88192..88818 | + | 627 | WP_000484110.1 | norphogenetic protein | - |
| HXS62_RS24725 () | 88815..89492 | + | 678 | WP_023352819.1 | metallophosphoesterase | - |
| HXS62_RS24730 () | 89489..90190 | + | 702 | WP_000684868.1 | hypothetical protein | - |
| HXS62_RS24735 () | 90492..91754 | + | 1263 | WP_023153718.1 | hypothetical protein | - |
| HXS62_RS24740 () | 91827..92333 | + | 507 | WP_000021768.1 | hypothetical protein | - |
| HXS62_RS24745 () | 92528..93256 | + | 729 | WP_023153717.1 | hypothetical protein | - |
| HXS62_RS24750 () | 93340..93543 | + | 204 | WP_000158004.1 | hypothetical protein | - |
| HXS62_RS24755 () | 93536..93775 | + | 240 | WP_023352820.1 | hypothetical protein | - |
| HXS62_RS24760 () | 93772..94497 | + | 726 | WP_023154014.1 | ead/Ea22-like family protein | - |
| HXS62_RS24765 () | 94494..94793 | + | 300 | WP_000118152.1 | hypothetical protein | - |
| HXS62_RS24770 () | 94795..95352 | + | 558 | WP_033550033.1 | ead/Ea22-like family protein | - |
| HXS62_RS24775 () | 95354..95617 | + | 264 | WP_000224220.1 | hypothetical protein | - |
| HXS62_RS24780 () | 95628..96227 | + | 600 | WP_053903357.1 | DUF551 domain-containing protein | - |
| HXS62_RS24785 () | 96310..96543 | + | 234 | WP_000516537.1 | hypothetical protein | - |
| HXS62_RS24790 () | 96722..97015 | + | 294 | WP_001677496.1 | hypothetical protein | - |
| HXS62_RS24795 () | 97022..97396 | + | 375 | WP_023154376.1 | hypothetical protein | - |
| HXS62_RS24800 () | 97378..98301 | + | 924 | WP_176486947.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|