MGE detailed information
MGE type: Prophage MGE length: 48700 bp
Accession: NZ_AP023226 Location: 4465150..4513849 Organism: Escherichia coli strain YJ3 Replicon: chromosome
Accession: NZ_AP023226 Location: 4465150..4513849 Organism: Escherichia coli strain YJ3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXS63_RS21360 () | 4461001..4462416 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| HXS63_RS21365 () | 4462499..4463482 | + | 984 | WP_000235508.1 | quinone oxidoreductase | - |
| HXS63_RS21370 () | 4463648..4463890 | - | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| HXS63_RS21375 () | 4464024..4465061 | - | 1038 | WP_000543841.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| HXS63_RS21380 () | 4465150..4466247 | + | 1098 | WP_000332259.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HXS63_RS21385 () | 4466308..4466556 | + | 249 | WP_001217553.1 | DinI-like family protein | - |
| HXS63_RS21390 () | 4466779..4467330 | + | 552 | WP_000543834.1 | SLATT domain-containing protein | - |
| HXS63_RS21395 () | 4467308..4468678 | + | 1371 | WP_039268535.1 | reverse transcriptase | - |
| HXS63_RS21400 () | 4468791..4468922 | - | 132 | Protein_4174 | tail fiber assembly protein | - |
| HXS63_RS21405 () | 4468974..4472735 | - | 3762 | WP_077784975.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HXS63_RS21410 () | 4472800..4473399 | - | 600 | WP_039268534.1 | hypothetical protein | VF |
| HXS63_RS21415 () | 4473469..4476966 | - | 3498 | WP_072646383.1 | host specificity protein J | - |
| HXS63_RS21420 () | 4477033..4477371 | - | 339 | WP_153274582.1 | hypothetical protein | - |
| HXS63_RS21425 () | 4477444..4478085 | - | 642 | WP_028127181.1 | tail assembly protein | - |
| HXS63_RS21430 () | 4477983..4478726 | - | 744 | WP_025670561.1 | C40 family peptidase | - |
| HXS63_RS21435 () | 4478731..4479429 | - | 699 | WP_039268532.1 | phage minor tail protein L | - |
| HXS63_RS21440 () | 4479439..4479768 | - | 330 | WP_000447253.1 | phage tail protein | - |
| HXS63_RS21445 () | 4479768..4482842 | - | 3075 | WP_039268531.1 | phage tail tape measure protein | - |
| HXS63_RS21450 () | 4482814..4483143 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| HXS63_RS21455 () | 4483152..4483538 | - | 387 | WP_001297778.1 | phage minor tail protein G | - |
| HXS63_RS21460 () | 4483599..4484342 | - | 744 | WP_000211109.1 | phage tail protein | - |
| HXS63_RS21465 () | 4484354..4484755 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| HXS63_RS21470 () | 4484752..4485330 | - | 579 | WP_000677108.1 | phage tail protein | - |
| HXS63_RS21475 () | 4485342..4485617 | - | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| HXS63_RS21480 () | 4485610..4485933 | - | 324 | WP_001097050.1 | DUF2190 family protein | - |
| HXS63_RS21485 () | 4486020..4488047 | - | 2028 | WP_086714422.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| HXS63_RS21490 () | 4488025..4489500 | - | 1476 | WP_001459763.1 | phage portal protein | - |
| HXS63_RS21495 () | 4489500..4489712 | - | 213 | WP_039268529.1 | hypothetical protein | - |
| HXS63_RS21500 () | 4489709..4491808 | - | 2100 | WP_000507030.1 | phage terminase large subunit family protein | - |
| HXS63_RS21505 () | 4491817..4492356 | - | 540 | WP_077784971.1 | DUF1441 family protein | - |
| HXS63_RS21510 () | 4493030..4493182 | - | 153 | WP_001139675.1 | hypothetical protein | - |
| HXS63_RS21515 () | 4493170..4493637 | - | 468 | WP_001341210.1 | lysis protein | - |
| HXS63_RS21520 () | 4493634..4494131 | - | 498 | WP_001135250.1 | lysozyme RrrD | - |
| HXS63_RS21525 () | 4494131..4494346 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| HXS63_RS21530 () | 4494414..4495466 | - | 1053 | WP_000799656.1 | site-specific DNA-methyltransferase | - |
| HXS63_RS21535 () | 4495617..4495820 | - | 204 | WP_000917724.1 | hypothetical protein | - |
| HXS63_RS21540 () | 4496044..4496469 | - | 426 | WP_000217632.1 | hypothetical protein | - |
| HXS63_RS21545 () | 4496750..4497502 | - | 753 | WP_039268527.1 | antitermination protein | - |
| HXS63_RS21550 () | 4497516..4498505 | - | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| HXS63_RS21555 () | 4498513..4499322 | - | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| HXS63_RS21560 () | 4499342..4499731 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HXS63_RS21565 () | 4499728..4500054 | - | 327 | WP_021518589.1 | LexA repressor | - |
| HXS63_RS21570 () | 4500054..4500548 | - | 495 | WP_001373594.1 | PerC family transcriptional regulator | - |
| HXS63_RS21575 () | 4500545..4501363 | - | 819 | WP_039268525.1 | helix-turn-helix domain-containing protein | - |
| HXS63_RS21580 () | 4501360..4501596 | - | 237 | WP_039268524.1 | hypothetical protein | - |
| HXS63_RS21585 () | 4501589..4502425 | - | 837 | WP_039268523.1 | ash family protein | - |
| HXS63_RS21590 () | 4502422..4502973 | - | 552 | WP_039268521.1 | hypothetical protein | - |
| HXS63_RS21595 () | 4503017..4503217 | - | 201 | WP_000649477.1 | helix-turn-helix domain-containing protein | - |
| HXS63_RS21600 () | 4503308..4503982 | + | 675 | WP_039268519.1 | LexA family transcriptional regulator | - |
| HXS63_RS21605 () | 4504669..4505031 | + | 363 | WP_000135680.1 | hypothetical protein | - |
| HXS63_RS21610 () | 4505097..4505921 | + | 825 | WP_000081311.1 | DUF2303 family protein | - |
| HXS63_RS21615 () | 4506140..4506892 | + | 753 | WP_171547635.1 | hypothetical protein | - |
| HXS63_RS21620 () | 4506929..4507210 | + | 282 | WP_001093916.1 | pyocin activator PrtN family protein | - |
| HXS63_RS21625 () | 4507258..4507431 | - | 174 | WP_000390072.1 | hypothetical protein | - |
| HXS63_RS21630 () | 4507471..4507857 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| HXS63_RS21635 () | 4507887..4508459 | - | 573 | WP_000458583.1 | SocA family protein | Antitoxin Detail |
| HXS63_RS21640 () | 4508695..4508817 | - | 123 | WP_001300034.1 | hypothetical protein | - |
| HXS63_RS21645 () | 4509180..4510165 | - | 986 | Protein_4223 | DUF2713 domain-containing protein | - |
| HXS63_RS21650 () | 4510483..4510998 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| HXS63_RS21655 () | 4511040..4511249 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| HXS63_RS21660 () | 4511365..4512690 | - | 1326 | WP_001326646.1 | MATE family efflux transporter DinF | - |
| HXS63_RS21665 () | 4512763..4513371 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| HXS63_RS21670 () | 4513481..4513849 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| HXS63_RS21675 () | 4514020..4516443 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| HXS63_RS21680 () | 4516598..4517470 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| HXS63_RS21685 () | 4517483..4517980 | - | 498 | WP_001326644.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|