MGE detailed information
MGE type: Genomic_island MGE length: 15494 bp
Accession: NZ_AP022536 Location: 3962026..3977519 Organism: Escherichia coli strain THO-008 Replicon: chromosome
Accession: NZ_AP022536 Location: 3962026..3977519 Organism: Escherichia coli strain THO-008 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF34_RS18885 () | 3957725..3958015 | + | 291 | WP_000558519.1 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | - |
| JLF34_RS18890 () | 3958026..3958769 | + | 744 | WP_001081495.1 | epimerase | - |
| JLF34_RS18895 () | 3958778..3958846 | + | 69 | Protein_3693 | VOC family protein | - |
| JLF34_RS18900 () | 3959144..3959401 | + | 258 | WP_001333700.1 | YjhX family toxin | - |
| JLF34_RS18905 () | 3959412..3959681 | + | 270 | Protein_3695 | class I SAM-dependent methyltransferase | - |
| JLF34_RS18910 () | 3959765..3961037 | + | 1273 | Protein_3696 | IS21 family transposase | - |
| JLF34_RS18915 () | 3961059..3961625 | + | 567 | Protein_3697 | MFS transporter | - |
| JLF34_RS18920 () | 3962026..3963096 | - | 1071 | WP_000920172.1 | hypothetical protein | - |
| JLF34_RS18925 () | 3963074..3964780 | - | 1707 | WP_000132880.1 | zinc ribbon domain-containing protein | - |
| JLF34_RS18930 () | 3964773..3965981 | - | 1209 | WP_001087767.1 | type I restriction-modification system subunit M | - |
| JLF34_RS18935 () | 3966223..3967431 | - | 1209 | WP_000772656.1 | Prophage integrase IntS ; Integrase | Integrase |
| JLF34_RS18945 () | 3967785..3969038 | - | 1254 | WP_001586696.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JLF34_RS18950 () | 3969050..3970153 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JLF34_RS18955 () | 3970441..3971496 | + | 1056 | WP_023277473.1 | phosphoporin PhoE | - |
| JLF34_RS18960 () | 3971535..3971936 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| JLF34_RS18965 () | 3971994..3973238 | - | 1245 | WP_001586695.1 | esterase FrsA | - |
| - () | 3972654..3972734 | - | 81 | NuclAT_12 | - | - |
| - () | 3972654..3972734 | - | 81 | NuclAT_12 | - | - |
| - () | 3972654..3972734 | - | 81 | NuclAT_12 | - | - |
| - () | 3972654..3972734 | - | 81 | NuclAT_12 | - | - |
| JLF34_RS18970 () | 3973330..3973788 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JLF34_RS18975 () | 3974049..3975506 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| JLF34_RS18980 () | 3975563..3975915 | - | 353 | Protein_3709 | peptide chain release factor H | - |
| JLF34_RS18985 () | 3975911..3976117 | - | 207 | Protein_3710 | RtcB family protein | - |
| JLF34_RS18990 () | 3976363..3976815 | - | 453 | WP_001059899.1 | GNAT family N-acetyltransferase | - |
| JLF34_RS18995 () | 3976825..3977223 | - | 399 | WP_001263485.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JLF34_RS19000 () | 3977226..3977519 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JLF34_RS19005 () | 3977571..3978626 | - | 1056 | WP_001226177.1 | DNA polymerase IV | - |
| JLF34_RS19010 () | 3978697..3979482 | - | 786 | WP_000207554.1 | putative lateral flagellar export/assembly protein LafU | - |
| JLF34_RS19015 () | 3979454..3981166 | + | 1713 | Protein_3716 | flagellar biosynthesis protein FlhA | - |
| JLF34_RS19020 () | 3981706..3982203 | - | 498 | WP_000006263.1 | REP-associated tyrosine transposase RayT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|