MGE detailed information
MGE type: Genomic_island MGE length: 48969 bp
Accession: NZ_AP022525 Location: 3910312..3959280 Organism: Escherichia coli strain THO-003 Replicon: chromosome
Accession: NZ_AP022525 Location: 3910312..3959280 Organism: Escherichia coli strain THO-003 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF28_RS19240 () | 3906513..3907100 | + | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
| JLF28_RS19245 () | 3907114..3908586 | + | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| JLF28_RS19250 () | 3908600..3910270 | + | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| JLF28_RS19255 () | 3911355..3911918 | + | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| JLF28_RS19260 () | 3912248..3913042 | + | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| JLF28_RS19265 () | 3913196..3913957 | + | 762 | WP_001213045.1 | protein HyxA | - |
| JLF28_RS19270 () | 3913999..3915075 | + | 1077 | Protein_3783 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| JLF28_RS19275 () | 3915097..3916290 | + | 1194 | WP_072017408.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| JLF28_RS19280 () | 3916474..3917142 | + | 669 | WP_001005267.1 | membrane protein | - |
| JLF28_RS19285 () | 3917385..3918080 | - | 696 | WP_001295803.1 | lactate utilization protein C | - |
| JLF28_RS19290 () | 3918073..3919500 | - | 1428 | WP_001295802.1 | iron-sulfur cluster-binding protein | - |
| JLF28_RS19295 () | 3919511..3920230 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| JLF28_RS19300 () | 3920756..3921610 | - | 855 | WP_001295801.1 | DNA-binding transcriptional regulator RclR | - |
| JLF28_RS19305 () | 3921837..3923162 | + | 1326 | WP_001046304.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| JLF28_RS19310 () | 3923271..3923507 | + | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| JLF28_RS19315 () | 3923519..3924112 | + | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| JLF28_RS19320 () | 3924272..3925141 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| JLF28_RS19325 () | 3925389..3926246 | + | 858 | WP_000620995.1 | HTH-type transcriptional activator RhaR | VF |
| JLF28_RS19330 () | 3926371..3930618 | - | 4248 | WP_000092552.1 | hypothetical protein | VF |
| JLF28_RS19335 () | 3931184..3932035 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| JLF28_RS19340 () | 3932062..3933051 | + | 990 | WP_001172283.1 | aldo/keto reductase | - |
| JLF28_RS19345 () | 3933082..3933975 | - | 894 | WP_000910713.1 | HTH-type transcriptional regulator ArgP | VF |
| JLF28_RS19350 () | 3934175..3935101 | - | 927 | WP_001524125.1 | HTH-type transcriptional regulator ArgP | VF |
| JLF28_RS19355 () | 3935258..3936178 | + | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| JLF28_RS19360 () | 3936351..3937493 | + | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| JLF28_RS19365 () | 3937966..3938067 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| JLF28_RS19370 () | 3938432..3938695 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| JLF28_RS19375 () | 3938695..3938835 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| JLF28_RS19380 () | 3938905..3939095 | - | 191 | Protein_3805 | hypothetical protein | - |
| JLF28_RS19385 () | 3939919..3940461 | + | 543 | WP_000389022.1 | hypothetical protein | VF |
| JLF28_RS19390 () | 3940536..3941123 | + | 588 | WP_000730982.1 | hypothetical protein | VF |
| JLF28_RS19395 () | 3941180..3941848 | + | 669 | WP_000716404.1 | hypothetical protein | VF |
| JLF28_RS19400 () | 3941874..3944399 | + | 2526 | WP_001131109.1 | hypothetical protein | VF |
| JLF28_RS19405 () | 3944389..3946032 | + | 1644 | WP_001265646.1 | hypothetical protein | VF |
| JLF28_RS19410 () | 3946001..3946711 | + | 711 | WP_001295798.1 | hypothetical protein | VF |
| JLF28_RS19415 () | 3947018..3947347 | + | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| JLF28_RS19420 () | 3947359..3947522 | - | 164 | Protein_3813 | tail fiber assembly protein | - |
| JLF28_RS19425 () | 3947596..3948210 | - | 615 | WP_001019923.1 | YagU family protein | - |
| JLF28_RS19430 () | 3948425..3948610 | - | 186 | WP_000146240.1 | hypothetical protein | - |
| JLF28_RS19435 () | 3948659..3948817 | + | 159 | Protein_3816 | integrase | - |
| JLF28_RS19440 () | 3949044..3949379 | + | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| JLF28_RS19445 () | 3949587..3950363 | + | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| JLF28_RS19450 () | 3950528..3951448 | - | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| JLF28_RS19455 () | 3951435..3952217 | - | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| JLF28_RS19460 () | 3952501..3955599 | + | 3099 | WP_000673070.1 | type I restriction endonuclease subunit R | - |
| JLF28_RS19465 () | 3955593..3957230 | + | 1638 | WP_000229741.1 | type I restriction-modification system subunit M | - |
| JLF28_RS19470 () | 3957220..3958467 | + | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| JLF28_RS19475 () | 3958647..3958832 | + | 186 | WP_101918754.1 | ash family protein | - |
| JLF28_RS19480 () | 3958810..3959280 | + | 471 | WP_000201175.1 | hypothetical protein | - |
| JLF28_RS19485 () | 3959426..3959629 | + | 204 | Protein_3826 | integrase | - |
| JLF28_RS19495 () | 3959834..3961087 | - | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JLF28_RS19500 () | 3961099..3962202 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JLF28_RS19505 () | 3962491..3963546 | + | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| JLF28_RS19510 () | 3963585..3963986 | - | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|