MGE detailed information
MGE type: Conjugative plasmid MGE length: 146978 bp
Accession: NZ_AP022487 Location: 1..146978 Organism: Citrobacter portucalensis strain STN0717-27 Replicon: plasmid pSTN0717-27-1
Accession: NZ_AP022487 Location: 1..146978 Organism: Citrobacter portucalensis strain STN0717-27 Replicon: plasmid pSTN0717-27-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF36_RS23745 () | 102..536 | - | 435 | WP_004201092.1 | hypothetical protein | - |
| JLF36_RS23750 () | 554..1669 | - | 1116 | WP_000946104.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| JLF36_RS23755 () | 1937..2545 | + | 609 | WP_000849069.1 | hypothetical protein | - |
| JLF36_RS23760 () | 2550..3071 | + | 522 | WP_000393783.1 | hypothetical protein | - |
| JLF36_RS23765 () | 3074..3595 | + | 522 | WP_000648873.1 | hypothetical protein | - |
| JLF36_RS23770 () | 3692..4165 | + | 474 | WP_000057876.1 | hypothetical protein | - |
| JLF36_RS23775 () | 4176..4469 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| JLF36_RS23780 () | 4474..5328 | + | 855 | WP_000539391.1 | hypothetical protein | - |
| JLF36_RS23785 () | 5328..6287 | + | 960 | WP_000829617.1 | S49 family peptidase | - |
| JLF36_RS23790 () | 6303..7163 | + | 861 | WP_000139696.1 | DsbA family protein | - |
| JLF36_RS23795 () | 7197..7625 | + | 429 | WP_200921650.1 | hypothetical protein | - |
| JLF36_RS23800 () | 7683..8042 | + | 360 | WP_000422769.1 | hypothetical protein | - |
| JLF36_RS23805 () | 8042..8488 | + | 447 | WP_000919343.1 | hypothetical protein | - |
| JLF36_RS23810 () | 8485..9003 | + | 519 | WP_000210757.1 | nitrite reductase | - |
| JLF36_RS23815 () | 9003..9233 | + | 231 | WP_000972665.1 | hypothetical protein | - |
| JLF36_RS23820 () | 9220..10077 | + | 858 | Protein_15 | hypothetical protein | - |
| JLF36_RS23825 () | 9989..10294 | + | 306 | WP_171820680.1 | hypothetical protein | - |
| JLF36_RS23830 () | 10297..10824 | + | 528 | WP_004201083.1 | thermonuclease family protein | - |
| JLF36_RS23835 () | 10882..11154 | + | 273 | WP_001043046.1 | HU family DNA-binding protein | - |
| JLF36_RS23840 () | 11243..11536 | + | 294 | WP_001239998.1 | hypothetical protein | - |
| JLF36_RS23845 () | 11563..11865 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| JLF36_RS23850 () | 11870..12220 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JLF36_RS23855 () | 12383..12931 | + | 549 | WP_001061573.1 | hypothetical protein | - |
| JLF36_RS23860 () | 13272..13466 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| JLF36_RS23865 () | 13477..13848 | + | 372 | WP_000516918.1 | hypothetical protein | - |
| JLF36_RS23870 () | 13841..14311 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| JLF36_RS23875 () | 14326..14661 | - | 336 | WP_000683477.1 | hypothetical protein | - |
| JLF36_RS23880 () | 14758..15246 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| JLF36_RS23885 () | 15249..15746 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| JLF36_RS23890 () | 16308..17240 | + | 933 | WP_000434070.1 | hypothetical protein | - |
| JLF36_RS23895 () | 17314..18777 | + | 1464 | WP_001280522.1 | AAA family ATPase | - |
| JLF36_RS23900 () | 18839..19231 | + | 393 | WP_000018404.1 | hypothetical protein | - |
| JLF36_RS23905 () | 19280..19474 | + | 195 | WP_000757530.1 | DUF2997 domain-containing protein | - |
| JLF36_RS23910 () | 19468..20652 | + | 1185 | WP_000245300.1 | hypothetical protein | - |
| JLF36_RS23915 () | 20664..21011 | + | 348 | WP_000039129.1 | hypothetical protein | - |
| JLF36_RS23920 () | 21008..21436 | + | 429 | WP_000988988.1 | hypothetical protein | - |
| JLF36_RS23925 () | 21429..21992 | + | 564 | WP_000004671.1 | hypothetical protein | - |
| JLF36_RS23930 () | 22004..22573 | + | 570 | WP_001256126.1 | hypothetical protein | - |
| JLF36_RS23935 () | 22576..23121 | + | 546 | WP_000435225.1 | hypothetical protein | - |
| JLF36_RS23940 () | 23238..24176 | + | 939 | WP_000268394.1 | chromosome partitioning protein ParB | - |
| JLF36_RS23945 () | 24176..24373 | + | 198 | WP_000532167.1 | hypothetical protein | - |
| JLF36_RS23950 () | 24611..24853 | + | 243 | WP_001096360.1 | hypothetical protein | - |
| JLF36_RS23955 () | 24856..25218 | + | 363 | WP_001258026.1 | hypothetical protein | - |
| JLF36_RS23960 () | 25211..26455 | + | 1245 | WP_000098294.1 | site-specific DNA-methyltransferase | - |
| JLF36_RS23965 () | 26469..26918 | + | 450 | WP_001053910.1 | hypothetical protein | - |
| JLF36_RS23970 () | 26900..27211 | + | 312 | WP_000380893.1 | hypothetical protein | - |
| JLF36_RS23975 () | 27385..28170 | + | 786 | WP_001151305.1 | Sporulation initiation inhibitor protein Soj | VF |
| JLF36_RS23980 () | 28174..29355 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| JLF36_RS23985 () | 29404..29676 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| JLF36_RS23990 () | 29729..30364 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| JLF36_RS23995 () | 30456..30599 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| JLF36_RS24000 () | 30926..31303 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| JLF36_RS24005 () | 31296..31577 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| JLF36_RS24010 () | 31552..32226 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| JLF36_RS24015 () | 32294..32725 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| JLF36_RS24020 () | 32731..33042 | + | 312 | WP_002210541.1 | hypothetical protein | - |
| JLF36_RS24025 () | 33051..33551 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| JLF36_RS24030 () | 33555..34982 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| JLF36_RS24035 () | 34982..35638 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| JLF36_RS24040 () | 35694..36311 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| JLF36_RS24045 () | 36523..36822 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| JLF36_RS24050 () | 36913..37401 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| JLF36_RS24055 () | 37416..39608 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| JLF36_RS24060 () | 39608..39841 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| JLF36_RS24065 () | 39823..40440 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| JLF36_RS24070 () | 40608..43580 | + | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
| JLF36_RS24075 () | 43577..45442 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| JLF36_RS24080 () | 45453..46037 | + | 585 | WP_000332868.1 | hypothetical protein | - |
| JLF36_RS24085 () | 45994..46623 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| JLF36_RS24090 () | 46633..47079 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| JLF36_RS24095 () | 47089..47466 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| JLF36_RS24100 () | 47466..48128 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| JLF36_RS24105 () | 48309..48452 | + | 144 | WP_001275801.1 | hypothetical protein | - |
| JLF36_RS24110 () | 48452..48829 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| JLF36_RS24115 () | 48974..49255 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| JLF36_RS24120 () | 49252..49878 | + | 627 | WP_001049717.1 | hypothetical protein | - |
| JLF36_RS24125 () | 49862..50779 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| JLF36_RS24130 () | 50779..52092 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| JLF36_RS24135 () | 52089..52667 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JLF36_RS24140 () | 52671..53063 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| JLF36_RS24145 () | 53264..54688 | + | 1425 | Protein_80 | DUF4165 domain-containing protein | - |
| JLF36_RS24150 () | 54752..55899 | + | 1148 | WP_096755719.1 | IS3 family transposase ISEhe3 | Transposase |
| JLF36_RS24155 () | 55915..59982 | + | 4068 | Protein_82 | hypothetical protein | - |
| JLF36_RS24160 () | 60131..60838 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| JLF36_RS24165 () | 60835..63282 | + | 2448 | WP_200921652.1 | type IV secretion system protein TraC | - |
| JLF36_RS24170 () | 63297..63614 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| JLF36_RS24175 () | 63611..64141 | + | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| JLF36_RS24180 () | 64104..65369 | + | 1266 | WP_001447719.1 | conjugal transfer protein TraW | - |
| JLF36_RS24185 () | 65366..66037 | + | 672 | WP_000575345.1 | EAL domain-containing protein | - |
| JLF36_RS24190 () | 66034..67041 | + | 1008 | WP_000983282.1 | TraU family protein | - |
| JLF36_RS24195 () | 67145..69952 | + | 2808 | WP_001447718.1 | conjugal transfer mating pair stabilization protein TraN | - |
| JLF36_RS24200 () | 69991..70851 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| JLF36_RS24205 () | 70974..71615 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| JLF36_RS24210 () | 71910..72230 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| JLF36_RS24215 () | 72534..72719 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| JLF36_RS24220 () | 72939..73907 | + | 969 | WP_000085160.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| JLF36_RS24225 () | 73918..74826 | + | 909 | WP_000739139.1 | hypothetical protein | - |
| JLF36_RS24230 () | 74887..75417 | + | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| JLF36_RS24235 () | 75512..76501 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| JLF36_RS24240 () | 76564..77574 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| JLF36_RS24245 () | 77774..77992 | + | 219 | Protein_100 | DUF3150 domain-containing protein | - |
| JLF36_RS24250 () | 78061..79229 | + | 1169 | WP_100216202.1 | IS3 family transposase ISLad1 | Transposase |
| JLF36_RS24255 () | 79239..80303 | + | 1065 | Protein_102 | DUF3150 domain-containing protein | - |
| JLF36_RS24260 () | 80388..82184 | + | 1797 | WP_000039319.1 | VWA domain-containing protein | - |
| JLF36_RS24265 () | 82246..82581 | + | 336 | WP_001447572.1 | hypothetical protein | - |
| JLF36_RS24270 () | 82846..83385 | + | 540 | WP_000018872.1 | hypothetical protein | - |
| JLF36_RS24275 () | 83476..83976 | + | 501 | WP_000793769.1 | hypothetical protein | - |
| JLF36_RS24280 () | 84050..84934 | + | 885 | WP_000477209.1 | hypothetical protein | - |
| JLF36_RS24285 () | 85000..85224 | + | 225 | WP_001102700.1 | 2Fe-2S ferredoxin-like protein | - |
| JLF36_RS24290 () | 85286..85675 | + | 390 | WP_200921641.1 | hypothetical protein | - |
| JLF36_RS24295 () | 85665..86117 | + | 453 | WP_001176699.1 | hypothetical protein | - |
| JLF36_RS24300 () | 86195..86437 | - | 243 | WP_002210529.1 | hypothetical protein | - |
| JLF36_RS24305 () | 86455..86646 | + | 192 | WP_000651508.1 | hypothetical protein | - |
| JLF36_RS24310 () | 86691..87068 | + | 378 | WP_001337696.1 | hypothetical protein | - |
| JLF36_RS24315 () | 87260..87604 | + | 345 | WP_000209093.1 | hypothetical protein | - |
| JLF36_RS24320 () | 87682..87984 | + | 303 | WP_000410925.1 | hypothetical protein | - |
| JLF36_RS24325 () | 88062..89687 | + | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| JLF36_RS24330 () | 89748..90179 | + | 432 | WP_000687894.1 | hypothetical protein | - |
| JLF36_RS24335 () | 90253..90807 | + | 555 | WP_001093867.1 | hypothetical protein | - |
| JLF36_RS24340 () | 91040..91426 | + | 387 | WP_000042274.1 | hypothetical protein | - |
| JLF36_RS24345 () | 91514..93967 | + | 2454 | WP_001187969.1 | phosphoadenosine phosphosulfate reductase | - |
| JLF36_RS24350 () | 94169..94372 | + | 204 | WP_000050847.1 | hypothetical protein | - |
| JLF36_RS24355 () | 94444..95049 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| JLF36_RS24360 () | 95042..95311 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| JLF36_RS24365 () | 95325..95543 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| JLF36_RS24370 () | 95617..96174 | + | 558 | WP_000064432.1 | hypothetical protein | - |
| JLF36_RS24375 () | 96249..97100 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| JLF36_RS24380 () | 97559..97945 | + | 387 | WP_001077336.1 | hypothetical protein | - |
| JLF36_RS24385 () | 98123..99850 | + | 1728 | WP_000122922.1 | toprim domain-containing protein | - |
| JLF36_RS24390 () | 99837..100115 | + | 279 | WP_000268337.1 | hypothetical protein | - |
| JLF36_RS24395 () | 100188..100409 | + | 222 | WP_000714163.1 | hypothetical protein | - |
| JLF36_RS24400 () | 100591..101595 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| JLF36_RS24405 () | 101674..101913 | - | 240 | Protein_132 | Tn3 family transposase | - |
| JLF36_RS24410 () | 102057..102707 | - | 651 | Protein_133 | Tn3 family transposase TnpA_IS1071 | Transposase |
| JLF36_RS24415 () | 102717..104051 | - | 1335 | WP_200921643.1 | IS4 family transposase ISAzo5 | Transposase |
| JLF36_RS24420 () | 104123..104725 | - | 603 | Protein_135 | Tn3 family transposase TnpA_IS1071 | Transposase |
| JLF36_RS24425 () | 104612..105187 | + | 576 | WP_156356240.1 | ECF transporter S component | - |
| JLF36_RS24430 () | 105371..105910 | - | 540 | WP_070085966.1 | GNAT family N-acetyltransferase | - |
| JLF36_RS24435 () | 106052..106888 | - | 837 | WP_000480959.1 | hypothetical protein | ARG |
| JLF36_RS24440 () | 106888..107691 | - | 804 | WP_025464697.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| JLF36_RS24445 () | 107721..108512 | - | 792 | WP_200921654.1 | Streptomycin 3''-adenylyltransferase | ARG |
| JLF36_RS24450 () | 108658..109671 | + | 1014 | WP_000845054.1 | IS91 family transposase ISAzo26 | Transposase |
| JLF36_RS24455 () | 109977..110534 | + | 558 | WP_001162012.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| JLF36_RS24460 () | 110537..113509 | + | 2973 | WP_001138073.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| JLF36_RS24465 () | 113588..114592 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| JLF36_RS24470 () | 114869..114988 | + | 120 | Protein_145 | permease | - |
| JLF36_RS24475 () | 114998..115114 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| JLF36_RS24480 () | 115235..115609 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| JLF36_RS24485 () | 115723..116448 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| JLF36_RS24490 () | 116689..120834 | + | 4146 | WP_200921656.1 | RHS domain-containing protein | - |
| JLF36_RS24495 () | 120806..121246 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| JLF36_RS24500 () | 121417..121869 | + | 453 | WP_000791469.1 | hypothetical protein | - |
| JLF36_RS24505 () | 121885..122487 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| JLF36_RS24510 () | 122749..123030 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| JLF36_RS24515 () | 123329..123865 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| JLF36_RS24520 () | 123868..124878 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| JLF36_RS24525 () | 124883..125752 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| JLF36_RS24530 () | 125749..126240 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| JLF36_RS24535 () | 126557..127432 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| JLF36_RS24540 () | 127585..128625 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| JLF36_RS24545 () | 128912..130423 | + | 1512 | WP_000811656.1 | ATP-dependent helicase | - |
| JLF36_RS24550 () | 130534..131574 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| JLF36_RS24555 () | 131576..133009 | + | 1434 | WP_200921644.1 | conjugal transfer protein TraH | - |
| JLF36_RS24560 () | 133022..136636 | + | 3615 | WP_200921646.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| JLF36_RS24565 () | 136674..137036 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| JLF36_RS24570 () | 137752..138024 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| JLF36_RS24575 () | 138024..138272 | + | 249 | Protein_166 | hypothetical protein | VF |
| JLF36_RS24580 () | 138375..139547 | + | 1173 | WP_048213832.1 | IS21 family transposase IS21 | Transposase |
| JLF36_RS24585 () | 139547..140344 | + | 798 | WP_048213831.1 | IS21 family transposase IS21 | Transposase |
| JLF36_RS24590 () | 140400..140687 | + | 288 | Protein_169 | transglycosylase SLT domain-containing protein | - |
| JLF36_RS24595 () | 140698..141306 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| JLF36_RS24600 () | 141303..141854 | + | 552 | WP_001020646.1 | hypothetical protein | - |
| JLF36_RS24605 () | 141914..142333 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| JLF36_RS24610 () | 142335..142628 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| JLF36_RS24615 () | 142645..143628 | - | 984 | WP_000077457.1 | ParM/StbA family protein | - |
| JLF36_RS24620 () | 144127..144666 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| JLF36_RS24625 () | 144671..144958 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| JLF36_RS24630 () | 144943..146043 | + | 1101 | WP_001348532.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|