MGE detailed information
MGE type: Prophage MGE length: 64089 bp
Accession: NZ_AP022399 Location: 2152095..2216183 Organism: Citrobacter portucalensis strain STW0522-30 Replicon: chromosome
Accession: NZ_AP022399 Location: 2152095..2216183 Organism: Citrobacter portucalensis strain STW0522-30 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF43_RS10210 () | 2148493..2149134 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JLF43_RS10215 () | 2149202..2150380 | - | 1179 | WP_126957910.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JLF43_RS10220 () | 2150513..2150803 | + | 291 | WP_003833810.1 | DNA damage-inducible protein YebG | - |
| JLF43_RS10225 () | 2150925..2151278 | + | 354 | WP_126957912.1 | hypothetical protein | - |
| JLF43_RS10230 () | 2151373..2152032 | + | 660 | WP_003833804.1 | tellurite resistance TerB family protein | - |
| JLF43_RS10235 () | 2152119..2154173 | + | 2055 | WP_186336565.1 | oligopeptidase B | - |
| JLF43_RS10240 () | 2154164..2154826 | - | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| JLF43_RS10245 () | 2154850..2155506 | - | 657 | WP_003833801.1 | carbon-nitrogen hydrolase family protein | - |
| JLF43_RS10250 () | 2155613..2155843 | - | 231 | WP_003833800.1 | DNA polymerase III subunit theta | - |
| JLF43_RS10255 () | 2155987..2156361 | + | 375 | WP_003833799.1 | CopC domain-containing protein YobA | - |
| JLF43_RS10260 () | 2156365..2157237 | + | 873 | WP_003833795.1 | copper homeostasis membrane protein CopD | - |
| JLF43_RS10265 () | 2157258..2157596 | + | 339 | WP_003833793.1 | YebY family protein | - |
| - () | 2157717..2157860 | - | 144 | - | - | Antitoxin Detail |
| - () | 2157752..2157855 | + | 104 | - | - | Toxin Detail |
| JLF43_RS10270 () | 2157933..2159018 | - | 1086 | WP_153752806.1 | hypothetical protein ; Integrase | Integrase |
| JLF43_RS10275 () | 2158987..2159259 | - | 273 | WP_016156226.1 | hypothetical protein | - |
| JLF43_RS10280 () | 2159324..2159566 | - | 243 | WP_003841647.1 | DUF4060 family protein | - |
| JLF43_RS10285 () | 2159749..2160093 | - | 345 | WP_054528498.1 | hypothetical protein | - |
| JLF43_RS10290 () | 2160128..2161213 | - | 1086 | WP_200921465.1 | recombinase RecT | - |
| JLF43_RS10295 () | 2161225..2164080 | - | 2856 | WP_200921466.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| JLF43_RS10300 () | 2164221..2164382 | - | 162 | WP_200921467.1 | hypothetical protein | - |
| JLF43_RS10305 () | 2164394..2164600 | - | 207 | WP_016156718.1 | hypothetical protein | - |
| JLF43_RS10310 () | 2164983..2165177 | + | 195 | WP_071667478.1 | hypothetical protein | - |
| JLF43_RS10315 () | 2165283..2165480 | + | 198 | WP_128612435.1 | hypothetical protein | - |
| JLF43_RS10320 () | 2165756..2166736 | + | 981 | WP_000082736.1 | IS5 family transposase ISEc68 | Transposase |
| JLF43_RS10325 () | 2166847..2166993 | - | 147 | WP_200927078.1 | hypothetical protein | - |
| JLF43_RS10330 () | 2166999..2167463 | - | 465 | WP_071667480.1 | hypothetical protein | - |
| JLF43_RS10335 () | 2167507..2167902 | - | 396 | WP_071667481.1 | helix-turn-helix domain-containing protein | - |
| JLF43_RS10340 () | 2168006..2168239 | + | 234 | WP_124021115.1 | helix-turn-helix domain-containing protein | - |
| JLF43_RS10345 () | 2168242..2168781 | + | 540 | WP_200921468.1 | toxin YdaT domain-containing protein | - |
| JLF43_RS10350 () | 2168949..2169896 | + | 948 | WP_200927079.1 | hypothetical protein | - |
| JLF43_RS10355 () | 2169899..2170648 | + | 750 | WP_200921469.1 | IS21 family transposase ISRel5 | Transposase |
| JLF43_RS10360 () | 2170667..2170978 | + | 312 | WP_200921470.1 | hypothetical protein | - |
| JLF43_RS10365 () | 2170975..2171463 | + | 489 | WP_200921633.1 | hypothetical protein | - |
| JLF43_RS10370 () | 2171460..2171648 | + | 189 | WP_163199177.1 | hypothetical protein | - |
| JLF43_RS10375 () | 2171645..2172061 | + | 417 | WP_200921471.1 | hypothetical protein | - |
| JLF43_RS10380 () | 2172066..2172266 | + | 201 | WP_142972720.1 | hypothetical protein | - |
| JLF43_RS10385 () | 2172579..2173118 | + | 540 | WP_171859136.1 | DUF551 domain-containing protein | - |
| JLF43_RS10390 () | 2173347..2173604 | + | 258 | WP_016156704.1 | hypothetical protein | - |
| JLF43_RS10395 () | 2173595..2175634 | + | 2040 | WP_200921594.1 | DNA cytosine methyltransferase | - |
| JLF43_RS10400 () | 2175780..2176013 | + | 234 | WP_137366714.1 | DinI-like family protein | - |
| JLF43_RS10405 () | 2176131..2176379 | + | 249 | WP_075862010.1 | hypothetical protein | - |
| JLF43_RS10410 () | 2176414..2177013 | + | 600 | WP_200921472.1 | DUF1367 family protein | - |
| JLF43_RS10415 () | 2177013..2177219 | + | 207 | WP_024166998.1 | hypothetical protein | - |
| JLF43_RS10420 () | 2177222..2177833 | + | 612 | WP_200921473.1 | recombination protein NinG | - |
| JLF43_RS10425 () | 2177830..2177970 | + | 141 | WP_200921474.1 | YlcG family protein | - |
| JLF43_RS10430 () | 2177967..2178788 | + | 822 | WP_200921475.1 | antitermination protein | - |
| JLF43_RS10435 () | 2179043..2179321 | + | 279 | WP_127674224.1 | holin | - |
| JLF43_RS10440 () | 2179293..2179841 | + | 549 | WP_200921476.1 | lysozyme | - |
| JLF43_RS10445 () | 2179838..2180368 | + | 531 | WP_200923015.1 | hypothetical protein | - |
| JLF43_RS10450 () | 2180380..2180973 | - | 594 | WP_127674227.1 | hypothetical protein | - |
| JLF43_RS10455 () | 2181097..2182083 | + | 987 | WP_200921477.1 | terminase small subunit | - |
| JLF43_RS10460 () | 2182061..2183365 | + | 1305 | WP_200921478.1 | terminase family protein | - |
| JLF43_RS10465 () | 2183370..2184773 | + | 1404 | WP_200921479.1 | DUF4055 domain-containing protein | - |
| JLF43_RS10470 () | 2184775..2185881 | + | 1107 | WP_200921480.1 | hypothetical protein | - |
| JLF43_RS10475 () | 2186202..2186954 | + | 753 | WP_016156687.1 | hypothetical protein | - |
| JLF43_RS10480 () | 2186972..2188111 | + | 1140 | WP_200921481.1 | P22 coat - protein 5 family protein | - |
| JLF43_RS10485 () | 2188151..2188402 | + | 252 | WP_200927080.1 | hypothetical protein | - |
| JLF43_RS10490 () | 2188405..2188887 | + | 483 | WP_200921483.1 | hypothetical protein | - |
| JLF43_RS10495 () | 2188889..2189242 | + | 354 | WP_200921484.1 | hypothetical protein | - |
| JLF43_RS10500 () | 2189245..2189844 | + | 600 | WP_047416527.1 | hypothetical protein | - |
| JLF43_RS10505 () | 2189834..2190280 | + | 447 | WP_047416529.1 | DUF4128 domain-containing protein | - |
| JLF43_RS10510 () | 2190326..2191258 | + | 933 | WP_200921485.1 | immunoglobulin domain-containing protein | - |
| JLF43_RS10515 () | 2191300..2191638 | + | 339 | WP_137366709.1 | hypothetical protein | - |
| JLF43_RS10520 () | 2191656..2191943 | + | 288 | WP_200921486.1 | DUF1799 domain-containing protein | - |
| JLF43_RS10525 () | 2191943..2195521 | + | 3579 | WP_200921487.1 | phage tail tape measure protein | - |
| JLF43_RS10530 () | 2195521..2195745 | + | 225 | WP_049041295.1 | hypothetical protein | - |
| JLF43_RS10535 () | 2195808..2196218 | + | 411 | WP_175330120.1 | hypothetical protein | - |
| JLF43_RS10540 () | 2196394..2197008 | + | 615 | WP_121581564.1 | hypothetical protein | - |
| JLF43_RS10545 () | 2197005..2197379 | + | 375 | WP_121581562.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| JLF43_RS10550 () | 2197443..2197793 | + | 351 | WP_175330124.1 | phage tail protein | - |
| JLF43_RS10555 () | 2197802..2198575 | + | 774 | WP_200921488.1 | phage minor tail protein L | - |
| JLF43_RS10560 () | 2198588..2199319 | + | 732 | WP_121581556.1 | C40 family peptidase | - |
| JLF43_RS10565 () | 2199307..2199900 | + | 594 | WP_019076579.1 | tail assembly protein | - |
| JLF43_RS10570 () | 2199956..2203156 | + | 3201 | WP_200921489.1 | DUF1983 domain-containing protein | - |
| JLF43_RS10575 () | 2203149..2203469 | + | 321 | WP_200921490.1 | hypothetical protein | - |
| JLF43_RS10580 () | 2203469..2204149 | + | 681 | WP_200923016.1 | hypothetical protein | - |
| JLF43_RS10585 () | 2204208..2205569 | + | 1362 | WP_200921436.1 | phage tail protein | - |
| JLF43_RS10590 () | 2205704..2205946 | - | 243 | WP_200921493.1 | DinI family protein | - |
| JLF43_RS10595 () | 2206366..2207853 | + | 1488 | WP_161952885.1 | Group II intron-encoded protein LtrA | VF |
| JLF43_RS10600 () | 2207933..2208352 | + | 420 | WP_200921437.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JLF43_RS10605 () | 2208355..2209623 | + | 1269 | WP_200921438.1 | Y-family DNA polymerase | - |
| JLF43_RS10610 () | 2209616..2210287 | - | 672 | WP_200921494.1 | SOS response-associated peptidase | - |
| JLF43_RS10615 () | 2210773..2211414 | + | 642 | WP_200921495.1 | protein-serine/threonine phosphatase | - |
| JLF43_RS10620 () | 2211415..2211606 | - | 192 | WP_003833789.1 | YebW family protein | - |
| JLF43_RS10625 () | 2211709..2211945 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| JLF43_RS10630 () | 2212046..2213434 | - | 1389 | WP_200921595.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JLF43_RS10635 () | 2213550..2216183 | - | 2634 | WP_063940870.1 | hypothetical protein | VF |
| JLF43_RS10640 () | 2216152..2217435 | - | 1284 | WP_003833783.1 | membrane integrity lipid transport subunit YebS | - |
| JLF43_RS10645 () | 2217564..2218061 | + | 498 | WP_003833782.1 | GAF domain-containing protein | - |
| JLF43_RS10650 () | 2218158..2218844 | + | 687 | WP_003833781.1 | RNA chaperone ProQ | - |
| JLF43_RS10655 () | 2218864..2220912 | + | 2049 | WP_048235216.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|