MGE detailed information
MGE type: Genomic_island MGE length: 24904 bp
Accession: NZ_AP021892 Location: 2430644..2455547 Organism: Escherichia coli strain 2018-01-1CC Replicon: chromosome
Accession: NZ_AP021892 Location: 2430644..2455547 Organism: Escherichia coli strain 2018-01-1CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRR21_RS11700 () | 2426332..2426688 | - | 357 | WP_032165636.1 | Arm DNA-binding domain-containing protein | - |
| HRR21_RS11705 () | 2426738..2428651 | - | 1914 | WP_032319213.1 | DUF927 domain-containing protein | - |
| HRR21_RS11710 () | 2428737..2430044 | - | 1308 | WP_049004880.1 | tyrosine-type recombinase/integrase | - |
| HRR21_RS11715 () | 2430644..2430997 | + | 354 | WP_058657721.1 | hypothetical protein | - |
| HRR21_RS11720 () | 2430990..2431421 | + | 432 | WP_017382949.1 | hypothetical protein | - |
| HRR21_RS11725 () | 2431469..2431897 | + | 429 | WP_026080582.1 | DUF2787 family protein | - |
| HRR21_RS11730 () | 2431956..2432420 | + | 465 | WP_023892867.1 | lecithin retinol acyltransferase family protein | - |
| HRR21_RS11735 () | 2432399..2432638 | + | 240 | WP_000113424.1 | DeoR family transcriptional regulator | - |
| HRR21_RS11740 () | 2432716..2433099 | + | 384 | WP_017382952.1 | hypothetical protein | - |
| HRR21_RS11745 () | 2433242..2433991 | + | 750 | WP_029403631.1 | DUF3944 domain-containing protein | - |
| HRR21_RS11750 () | 2434094..2434807 | + | 714 | WP_023205801.1 | WYL domain-containing protein | - |
| HRR21_RS11755 () | 2434866..2435177 | + | 312 | WP_023337782.1 | hypothetical protein | - |
| HRR21_RS11760 () | 2435251..2437116 | + | 1866 | WP_063080998.1 | DUF262 domain-containing protein | - |
| HRR21_RS11765 () | 2437319..2438875 | + | 1557 | WP_063080997.1 | type I restriction-modification system subunit M | - |
| HRR21_RS11770 () | 2438872..2440149 | + | 1278 | WP_063080996.1 | restriction endonuclease subunit S | - |
| HRR21_RS11775 () | 2440265..2443381 | + | 3117 | WP_063080995.1 | HsdR family type I site-specific deoxyribonuclease | - |
| HRR21_RS11780 () | 2443406..2444572 | + | 1167 | WP_063080994.1 | hypothetical protein | - |
| HRR21_RS11785 () | 2445141..2445838 | - | 698 | Protein_2306 | IS1 family transposase | - |
| HRR21_RS11790 () | 2446196..2447734 | + | 1539 | WP_024218489.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HRR21_RS11795 () | 2448100..2449434 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HRR21_RS11800 () | 2449514..2451661 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| HRR21_RS11805 () | 2451720..2453177 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| HRR21_RS11810 () | 2453414..2454931 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| HRR21_RS11815 () | 2455050..2455223 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HRR21_RS11820 () | 2455251..2455547 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HRR21_RS11825 () | 2455774..2456046 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| HRR21_RS11830 () | 2456058..2456288 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| HRR21_RS11835 () | 2456469..2458100 | + | 1632 | WP_001565376.1 | sensor histidine kinase | - |
| HRR21_RS11840 () | 2458097..2458816 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|