MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39206 bp
Accession: NZ_AP020328 Location: 1..39206 Organism: Mycobacterium avium subsp. hominissuis strain JP-H-1 Replicon: plasmid p2-JPH1
Accession: NZ_AP020328 Location: 1..39206 Organism: Mycobacterium avium subsp. hominissuis strain JP-H-1 Replicon: plasmid p2-JPH1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JPH1_RS26905 () | 797..2020 | - | 1224 | WP_042909842.1 | site-specific integrase | - |
| JPH1_RS26910 () | 2096..2791 | - | 696 | Protein_2 | IS21 family transposase ISLxx3 | Transposase |
| JPH1_RS26915 () | 3046..4344 | + | 1299 | WP_054585739.1 | glycosyltransferase | - |
| JPH1_RS26920 () | 4324..5310 | - | 987 | WP_082385904.1 | fatty acid desaturase | - |
| JPH1_RS27535 () | 5526..6278 | - | 753 | WP_172975585.1 | 1-aminocyclopropane-1-carboxylate synthase | - |
| JPH1_RS26930 () | 6736..7317 | + | 582 | WP_069953652.1 | helix-turn-helix domain-containing protein | - |
| JPH1_RS26940 () | 7798..8121 | - | 324 | WP_082385901.1 | helix-turn-helix domain-containing protein | - |
| JPH1_RS26945 () | 8121..8459 | - | 339 | WP_054585720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JPH1_RS26950 () | 9164..11992 | - | 2829 | WP_151834971.1 | Multifunctional conjugation protein TraI | Relaxase |
| JPH1_RS26955 () | 12152..12382 | + | 231 | WP_075630288.1 | antitoxin VbhA family protein | - |
| JPH1_RS26960 () | 12515..13521 | - | 1007 | Protein_11 | helix-turn-helix domain-containing protein | - |
| JPH1_RS26965 () | 13974..14171 | - | 198 | WP_074021511.1 | hypothetical protein | - |
| JPH1_RS26970 () | 14293..14520 | + | 228 | WP_054585716.1 | glycerol-3-phosphate dehydrogenase/oxidase | - |
| JPH1_RS27540 () | 14780..14932 | - | 153 | WP_162558790.1 | hypothetical protein | - |
| JPH1_RS26980 () | 15186..15545 | - | 360 | WP_157739682.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| JPH1_RS26985 () | 15600..15860 | - | 261 | WP_054585724.1 | hypothetical protein | - |
| JPH1_RS26990 () | 15949..16557 | + | 609 | WP_151834972.1 | ParA family protein | - |
| JPH1_RS26995 () | 16554..17003 | + | 450 | WP_054585713.1 | hypothetical protein | - |
| JPH1_RS27000 () | 17119..17865 | - | 747 | WP_082385902.1 | Crp/Fnr family transcriptional regulator | - |
| JPH1_RS27005 () | 18156..18419 | - | 264 | WP_139315510.1 | hypothetical protein | - |
| JPH1_RS27010 () | 18518..19921 | - | 1404 | WP_054585723.1 | DUF2156 domain-containing protein | - |
| JPH1_RS27015 () | 20140..20718 | - | 579 | WP_054585722.1 | Tn3 family transposase TnBth3 | Transposase |
| JPH1_RS27020 () | 20968..21366 | - | 399 | WP_054585721.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| JPH1_RS27025 () | 21359..21595 | - | 237 | WP_054585712.1 | antitoxin | Antitoxin Detail |
| JPH1_RS27030 () | 21725..23209 | - | 1485 | WP_054585711.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| JPH1_RS27040 () | 24014..34291 | + | 10278 | WP_054585710.1 | Linear gramicidin synthase subunit D | VF |
| JPH1_RS27045 () | 34479..35477 | + | 999 | WP_007170747.1 | Lsr2 family protein | - |
| JPH1_RS27050 () | 35515..36294 | - | 780 | WP_007170748.1 | IS21 family transposase ISLxx3 | Transposase |
| JPH1_RS27055 () | 36291..37229 | - | 939 | Protein_29 | IS21 family transposase ISLxx3 | Transposase |
| JPH1_RS27060 () | 37283..37570 | - | 288 | WP_042909843.1 | DUF1330 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|