MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 181469 bp
Accession: NZ_AP019689 Location: 1..181469 Organism: Klebsiella quasipneumoniae strain SNI47 Replicon: plasmid pTMSNI47-2
Accession: NZ_AP019689 Location: 1..181469 Organism: Klebsiella quasipneumoniae strain SNI47 Replicon: plasmid pTMSNI47-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TMSI_RS28405 () | 1..1011 | + | 1011 | WP_017900946.1 | RepB family plasmid replication initiator protein | - |
| TMSI_RS28410 () | 1833..2573 | - | 741 | Protein_1 | site-specific integrase | - |
| TMSI_RS28415 () | 2918..3194 | + | 277 | Protein_2 | IS3 family transposase | - |
| TMSI_RS28420 () | 3332..3868 | - | 537 | WP_023288364.1 | hypothetical protein | - |
| TMSI_RS28425 () | 4079..5052 | - | 974 | Protein_4 | IS3 family transposase ISYps8 | Transposase |
| TMSI_RS28430 () | 5119..6134 | + | 1016 | Protein_5 | IS110 family transposase ISSaen1 | Transposase |
| TMSI_RS28435 () | 6360..6473 | - | 114 | Protein_6 | transposase | - |
| TMSI_RS28445 () | 6826..7770 | - | 945 | WP_032413397.1 | ectoine utilization protein EutC | - |
| TMSI_RS28450 () | 7767..8786 | - | 1020 | WP_032731846.1 | pyridoxal-phosphate dependent enzyme | - |
| TMSI_RS28455 () | 8881..9606 | - | 726 | WP_148662571.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| TMSI_RS28460 () | 9711..10493 | - | 783 | WP_032413390.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| TMSI_RS28465 () | 10508..11164 | - | 657 | WP_048281129.1 | ectoine/hydroxyectoine ABC transporter permease subunit EhuD | - |
| TMSI_RS28470 () | 11161..11820 | - | 660 | WP_032413447.1 | ectoine/hydroxyectoine ABC transporter permease subunit EhuC | - |
| TMSI_RS28475 () | 11945..12799 | - | 855 | WP_032413386.1 | ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB | - |
| TMSI_RS28480 () | 12991..14400 | + | 1410 | WP_032413385.1 | PLP-dependent aminotransferase family protein | - |
| TMSI_RS28485 () | 14894..16084 | + | 1191 | WP_032413383.1 | ectoine hydrolase DoeA | - |
| TMSI_RS28490 () | 16097..17095 | + | 999 | WP_032413381.1 | N(2)-acetyl-L-2,4-diaminobutanoate deacetylase DoeB | - |
| TMSI_RS28495 () | 17142..18320 | + | 1179 | WP_032413379.1 | cystathionine gamma-synthase family protein | - |
| TMSI_RS28500 () | 18457..18804 | + | 348 | WP_032413377.1 | hypothetical protein | - |
| TMSI_RS28505 () | 18862..18987 | + | 126 | Protein_19 | IS256 family transposase ISAba42 | Transposase |
| TMSI_RS28510 () | 19121..19345 | - | 225 | Protein_20 | IS5 family transposase ISPan1 | Transposase |
| TMSI_RS28515 () | 19365..19550 | + | 186 | WP_071571073.1 | DUF2188 domain-containing protein | - |
| TMSI_RS28520 () | 19651..20163 | + | 513 | Protein_22 | DUF4113 domain-containing protein | - |
| TMSI_RS28525 () | 20263..20706 | + | 444 | WP_032413443.1 | DUF2384 domain-containing protein | Antitoxin Detail |
| TMSI_RS28530 () | 20703..21173 | + | 471 | WP_032413375.1 | RES family NAD+ phosphorylase | Toxin Detail |
| TMSI_RS28535 () | 21283..21543 | - | 261 | WP_017901409.1 | hypothetical protein | - |
| TMSI_RS28540 () | 22115..22492 | - | 378 | Protein_26 | transposase | - |
| TMSI_RS28550 () | 22626..23594 | + | 969 | WP_100112216.1 | IS5 family transposase IS903 | Transposase |
| TMSI_RS28555 () | 23829..25562 | - | 1734 | WP_004118832.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| TMSI_RS28560 () | 25570..26517 | - | 948 | WP_049013026.1 | acetamidase/formamidase family protein | - |
| TMSI_RS28565 () | 26562..28166 | - | 1605 | WP_004152278.1 | ABC transporter substrate-binding protein | - |
| TMSI_RS28570 () | 28179..29099 | - | 921 | WP_004118227.1 | ABC transporter permease | - |
| TMSI_RS28575 () | 29099..29947 | - | 849 | WP_004118228.1 | ABC transporter permease | - |
| TMSI_RS28580 () | 29944..30537 | - | 594 | WP_049013025.1 | ANTAR domain-containing protein | - |
| TMSI_RS28585 () | 30534..31661 | - | 1128 | WP_004118840.1 | transporter substrate-binding protein | - |
| TMSI_RS28590 () | 32056..33024 | - | 969 | WP_074418888.1 | IS5 family transposase IS903B | Transposase |
| TMSI_RS28595 () | 33042..33179 | - | 138 | WP_064171890.1 | hypothetical protein | - |
| TMSI_RS28605 () | 33683..34541 | + | 859 | Protein_37 | IS3 family transposase ISEc52 | Transposase |
| TMSI_RS28615 () | 34823..35899 | + | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| TMSI_RS28620 () | 35916..36050 | + | 135 | Protein_39 | transposase family protein | - |
| TMSI_RS28625 () | 36086..37054 | + | 969 | WP_004099053.1 | IS5 family transposase IS903B | Transposase |
| TMSI_RS28630 () | 37111..37278 | + | 168 | Protein_41 | IS3 family transposase | - |
| TMSI_RS28635 () | 37749..37868 | - | 120 | Protein_42 | IS3 family transposase ISEhe3 | Transposase |
| TMSI_RS28640 () | 38007..39983 | + | 1977 | WP_064171859.1 | TIR domain-containing protein | - |
| TMSI_RS28645 () | 40087..41943 | + | 1857 | WP_151819942.1 | hypothetical protein | - |
| TMSI_RS28650 () | 42501..42986 | + | 486 | WP_032238615.1 | hypothetical protein | - |
| TMSI_RS28655 () | 42983..43432 | + | 450 | WP_010431201.1 | response regulator | - |
| TMSI_RS28660 () | 43429..44601 | + | 1173 | WP_032238613.1 | response regulator | - |
| TMSI_RS28665 () | 44702..45184 | + | 483 | WP_074188320.1 | DUF4231 domain-containing protein | - |
| TMSI_RS28670 () | 45229..45360 | - | 132 | Protein_49 | IS3 family transposase IS1400 | Transposase |
| TMSI_RS28675 () | 45467..46177 | - | 711 | WP_116397526.1 | IS3 family transposase ISBcen15 | Transposase |
| TMSI_RS28680 () | 46523..48259 | + | 1737 | WP_064171884.1 | AAA family ATPase | - |
| TMSI_RS28685 () | 48249..49667 | + | 1419 | WP_001134628.1 | UvrD-helicase domain-containing protein | - |
| TMSI_RS28695 () | 49916..50884 | - | 969 | WP_167878526.1 | IS5 family transposase IS903B | Transposase |
| TMSI_RS28700 () | 51132..53441 | + | 2310 | WP_049013986.1 | TerB N-terminal domain-containing protein | - |
| TMSI_RS28705 () | 53445..54761 | + | 1317 | WP_049013985.1 | ATP-binding protein | - |
| TMSI_RS28710 () | 54758..56953 | + | 2196 | WP_049013984.1 | DEAD/DEAH box helicase | - |
| TMSI_RS28715 () | 57273..58433 | - | 1161 | WP_064171855.1 | IS30 family transposase ISCfr4 | Transposase |
| TMSI_RS28720 () | 58752..58982 | + | 231 | WP_001261276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| TMSI_RS28725 () | 58979..59395 | + | 417 | WP_049014623.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| TMSI_RS28735 () | 61262..62230 | - | 969 | WP_172969439.1 | IS5 family transposase IS903B | Transposase |
| TMSI_RS28740 () | 62263..62328 | - | 66 | Protein_62 | Tn3 family transposase ISEc63 | Transposase |
| TMSI_RS28745 () | 62492..65488 | + | 2997 | Protein_63 | Tn3 family transposase ISEc63 | Transposase |
| TMSI_RS28750 () | 65535..66023 | - | 489 | Protein_64 | substrate-binding domain-containing protein | - |
| TMSI_RS28755 () | 66586..66786 | - | 201 | WP_022631502.1 | hypothetical protein | - |
| TMSI_RS28760 () | 67087..68055 | - | 969 | WP_013815099.1 | IS5 family transposase IS903B | Transposase |
| TMSI_RS28770 () | 68428..70620 | + | 2193 | WP_004099052.1 | 1,4-alpha-glucan branching enzyme | - |
| TMSI_RS28775 () | 70750..72033 | + | 1284 | WP_004099051.1 | glucose-1-phosphate adenylyltransferase | - |
| TMSI_RS28780 () | 72122..73555 | + | 1434 | WP_009653212.1 | glycogen synthase GlgA | - |
| TMSI_RS28785 () | 73574..76021 | + | 2448 | WP_023157975.1 | glycogen phosphorylase | - |
| TMSI_RS28790 () | 76135..77778 | + | 1644 | WP_004197675.1 | phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) | - |
| TMSI_RS28795 () | 77903..78469 | + | 567 | WP_004197678.1 | LuxR family transcriptional regulator | - |
| TMSI_RS28800 () | 78804..79082 | + | 279 | WP_004197671.1 | hypothetical protein | - |
| TMSI_RS28805 () | 79110..79301 | - | 192 | Protein_74 | hypothetical protein | - |
| TMSI_RS28810 () | 79322..80719 | - | 1398 | WP_009653207.1 | ISNCY family transposase ISKpn21 | Transposase |
| TMSI_RS28815 () | 80816..82348 | - | 1533 | WP_009310015.1 | IS3 family transposase ISKpn38 | Transposase |
| TMSI_RS28820 () | 82510..82905 | - | 396 | WP_004143398.1 | ISNCY family transposase ISKpn21 | Transposase |
| TMSI_RS28825 () | 82954..84300 | - | 1347 | WP_077253535.1 | ISNCY family transposase ISLad2 | Transposase |
| TMSI_RS28830 () | 84526..85158 | + | 633 | WP_001567369.1 | hypothetical protein | - |
| TMSI_RS28835 () | 85187..86590 | - | 1404 | WP_001567368.1 | ISNCY family transposase ISKpn21 | Transposase |
| TMSI_RS28840 () | 86702..88234 | + | 1533 | WP_009310015.1 | IS3 family transposase ISKpn38 | Transposase |
| TMSI_RS28855 () | 88589..89286 | + | 698 | Protein_82 | IS1 family transposase IS1G | Transposase |
| TMSI_RS28860 () | 89355..91220 | - | 1866 | WP_048298735.1 | DUF262 domain-containing protein | - |
| TMSI_RS28870 () | 92253..92717 | + | 465 | WP_064171841.1 | hypothetical protein | - |
| TMSI_RS28875 () | 92717..93505 | + | 789 | WP_048298734.1 | hypothetical protein | - |
| TMSI_RS30795 () | 93519..93695 | + | 177 | WP_162887376.1 | hypothetical protein | - |
| TMSI_RS28880 () | 93767..94798 | - | 1032 | WP_072072824.1 | IS630 family transposase ISEc33 | Transposase |
| TMSI_RS28885 () | 94917..96127 | + | 1211 | WP_093515578.1 | IS3 family transposase ISEc27 | Transposase |
| TMSI_RS28890 () | 96139..96545 | + | 407 | Protein_89 | WYL domain-containing protein | - |
| TMSI_RS28895 () | 96584..97681 | + | 1098 | WP_048298731.1 | hypothetical protein | - |
| TMSI_RS28900 () | 97728..99299 | + | 1572 | WP_048298730.1 | ATP--cob(I)alamin adenosyltransferase | - |
| TMSI_RS28905 () | 99296..99568 | + | 273 | WP_071993384.1 | YkgJ family cysteine cluster protein | - |
| TMSI_RS28910 () | 99800..100105 | + | 306 | Protein_93 | helix-turn-helix domain-containing protein | - |
| TMSI_RS28915 () | 100179..100957 | + | 779 | Protein_94 | IS3 family transposase ISEc52 | Transposase |
| TMSI_RS28920 () | 101037..102172 | + | 1136 | WP_114139113.1 | IS3 family transposase IS1400 | Transposase |
| TMSI_RS28925 () | 102169..102866 | - | 698 | Protein_96 | IS1 family transposase | - |
| TMSI_RS28930 () | 103925..104041 | + | 117 | Protein_97 | transposase | - |
| TMSI_RS28940 () | 104461..104574 | + | 114 | WP_077253754.1 | IS3 family transposase | - |
| TMSI_RS28945 () | 104666..106264 | - | 1599 | WP_077263863.1 | sensor domain-containing diguanylate cyclase | - |
| TMSI_RS28955 () | 106635..107057 | - | 423 | Protein_100 | IS3 family transposase ISEcl1 | Transposase |
| TMSI_RS28960 () | 107102..108068 | + | 967 | Protein_101 | IS5 family transposase | - |
| TMSI_RS28965 () | 108242..108463 | - | 222 | WP_032416992.1 | hypothetical protein | - |
| TMSI_RS28980 () | 109772..110469 | - | 698 | Protein_103 | IS1 family transposase IS1G | Transposase |
| TMSI_RS28985 () | 110730..111698 | - | 969 | WP_172969440.1 | IS5 family transposase IS903B | Transposase |
| TMSI_RS28990 () | 112225..112437 | + | 213 | Protein_105 | IS3 family transposase ISYps8 | Transposase |
| TMSI_RS28995 () | 112482..113447 | - | 966 | Protein_106 | IS5 family transposase IS903 | Transposase |
| TMSI_RS29000 () | 113560..114534 | + | 975 | WP_065884158.1 | sensor domain-containing diguanylate cyclase | - |
| TMSI_RS29005 () | 114890..115240 | + | 351 | WP_004206664.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| TMSI_RS29010 () | 115292..115654 | + | 363 | WP_004206665.1 | arsenite efflux transporter metallochaperone ArsD | - |
| TMSI_RS29015 () | 115672..117423 | + | 1752 | WP_124070637.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| TMSI_RS29020 () | 117471..118760 | + | 1290 | WP_151819944.1 | arsenite efflux transporter membrane subunit ArsB | - |
| TMSI_RS29025 () | 118773..119198 | + | 426 | WP_007779002.1 | glutaredoxin-dependent arsenate reductase | - |
| TMSI_RS29030 () | 119231..119659 | - | 429 | WP_004206671.1 | GNAT family N-acetyltransferase | - |
| TMSI_RS29035 () | 119781..121532 | - | 1752 | WP_165451057.1 | Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein | VF |
| TMSI_RS29040 () | 121557..121919 | - | 363 | WP_016151353.1 | arsenic metallochaperone ArsD family protein | - |
| TMSI_RS29045 () | 121995..122540 | - | 546 | WP_016151352.1 | sigma-70 family RNA polymerase sigma factor | - |
| TMSI_RS29050 () | 122549..123262 | - | 714 | WP_016151351.1 | arsenical resistance protein ArsH | - |
| TMSI_RS29055 () | 123259..123585 | - | 327 | WP_016151350.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| TMSI_RS29060 () | 123917..124414 | + | 498 | WP_007871777.1 | GNAT family N-acetyltransferase | - |
| TMSI_RS29065 () | 124464..124625 | - | 162 | Protein_120 | aquaporin | - |
| TMSI_RS29070 () | 124682..125650 | - | 969 | WP_172969441.1 | IS5 family transposase IS903B | Transposase |
| TMSI_RS29075 () | 125958..127040 | + | 1083 | WP_007851507.1 | DNA-binding transcriptional repressor LacI | - |
| TMSI_RS29080 () | 127162..130236 | + | 3075 | WP_064171843.1 | beta-galactosidase | - |
| TMSI_RS29085 () | 130288..131541 | + | 1254 | WP_003846917.1 | lactose permease | - |
| TMSI_RS29090 () | 131607..131747 | + | 141 | Protein_125 | galactoside O-acetyltransferase | - |
| TMSI_RS29095 () | 131762..132457 | - | 696 | Protein_126 | IS1 family transposase | - |
| TMSI_RS29100 () | 132514..133244 | - | 731 | Protein_127 | IS3 family transposase ISEc52 | Transposase |
| TMSI_RS29105 () | 133668..134273 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| TMSI_RS29110 () | 134368..137265 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| TMSI_RS29115 () | 137342..138244 | - | 903 | WP_004181695.1 | Sugar transporter SemiSWEET | VF |
| TMSI_RS29120 () | 138537..139256 | + | 720 | WP_040217073.1 | SDR family oxidoreductase | - |
| TMSI_RS29125 () | 139323..140645 | - | 1323 | WP_040217071.1 | Acetylornithine/succinyldiaminopimelate aminotransferase | VF |
| TMSI_RS29130 () | 140642..142108 | - | 1467 | WP_049165011.1 | APC family permease | - |
| TMSI_RS29135 () | 142177..143547 | - | 1371 | WP_043875145.1 | glutamine synthetase family protein | - |
| TMSI_RS29140 () | 143719..144570 | + | 852 | WP_043875152.1 | MurR/RpiR family transcriptional regulator | - |
| TMSI_RS29145 () | 144625..145374 | + | 750 | WP_043875144.1 | N-formylglutamate amidohydrolase | - |
| TMSI_RS29150 () | 145378..146025 | + | 648 | WP_023328945.1 | cysteine hydrolase | - |
| TMSI_RS29155 () | 146067..147035 | + | 969 | WP_077263866.1 | IS5 family transposase IS903 | Transposase |
| TMSI_RS29160 () | 147208..147513 | + | 306 | WP_023328947.1 | hypothetical protein | VF |
| TMSI_RS29170 () | 148631..148945 | + | 315 | WP_023288299.1 | hypothetical protein | - |
| TMSI_RS29175 () | 149275..150279 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| TMSI_RS29180 () | 150379..150668 | - | 290 | Protein_142 | Tn3 family transposase | - |
| TMSI_RS29185 () | 150719..151471 | - | 753 | WP_004729622.1 | alpha/beta hydrolase | - |
| TMSI_RS29190 () | 151712..152581 | + | 870 | WP_001567390.1 | DMT family transporter | - |
| TMSI_RS29195 () | 152715..153938 | + | 1224 | WP_023287190.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| TMSI_RS29200 () | 154124..154897 | - | 774 | WP_004729618.1 | SDR family oxidoreductase | - |
| TMSI_RS29205 () | 154963..155664 | - | 702 | WP_001194072.1 | DsbA family oxidoreductase | - |
| TMSI_RS29210 () | 155730..156836 | - | 1107 | WP_023287189.1 | alkene reductase | - |
| TMSI_RS29215 () | 157050..157379 | + | 330 | WP_002431133.1 | thioredoxin family protein | - |
| TMSI_RS29220 () | 157409..157747 | - | 339 | WP_000888080.1 | carboxymuconolactone decarboxylase family protein | - |
| TMSI_RS29225 () | 157752..158333 | - | 582 | WP_000210409.1 | HTH-type transcriptional repressor NemR | VF |
| TMSI_RS29230 () | 158475..159032 | - | 558 | WP_000108589.1 | OsmC family protein | - |
| TMSI_RS29235 () | 159217..159426 | - | 210 | Protein_153 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| TMSI_RS29240 () | 159499..159908 | + | 410 | Protein_154 | Tn3 family transposase | - |
| TMSI_RS29245 () | 159987..160991 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| TMSI_RS29250 () | 161465..161947 | - | 483 | WP_004210306.1 | hypothetical protein | - |
| TMSI_RS29260 () | 164072..164728 | - | 657 | WP_023287188.1 | hypothetical protein | - |
| TMSI_RS29265 () | 165563..166462 | - | 900 | WP_004026560.1 | RepB family plasmid replication initiator protein | - |
| TMSI_RS29270 () | 166783..167844 | - | 1062 | WP_048298749.1 | hypothetical protein | - |
| TMSI_RS29275 () | 167930..168184 | - | 255 | WP_016946352.1 | transcriptional regulator | - |
| TMSI_RS29280 () | 168361..169497 | + | 1137 | WP_014386529.1 | tyrosine-type recombinase/integrase | - |
| TMSI_RS29285 () | 169563..169880 | - | 318 | WP_004026552.1 | hypothetical protein | - |
| TMSI_RS29290 () | 170031..170354 | - | 324 | WP_048298750.1 | hypothetical protein | - |
| TMSI_RS29295 () | 170351..171109 | - | 759 | WP_048298751.1 | hypothetical protein | - |
| TMSI_RS29300 () | 171106..172065 | - | 960 | WP_048298752.1 | DNA replication protein | - |
| TMSI_RS29305 () | 172108..172515 | - | 408 | WP_004186937.1 | hypothetical protein | - |
| TMSI_RS29310 () | 172525..172968 | - | 444 | WP_020477096.1 | hypothetical protein | - |
| TMSI_RS29320 () | 174264..175856 | - | 1593 | WP_048298753.1 | IS66 family transposase ISKox1 | Transposase |
| TMSI_RS29325 () | 175887..176237 | - | 351 | WP_048298754.1 | IS66 family transposase ISKox1 | Transposase |
| TMSI_RS29330 () | 176234..176674 | - | 441 | WP_048298755.1 | IS66 family transposase ISKox1 | Transposase |
| TMSI_RS30800 () | 176759..177052 | + | 294 | Protein_172 | DUF4113 domain-containing protein | - |
| TMSI_RS29340 () | 177131..177359 | + | 229 | Protein_173 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| TMSI_RS29350 () | 178603..179574 | - | 972 | WP_004117790.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| TMSI_RS29355 () | 179574..180740 | - | 1167 | WP_023287153.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|