MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 121858 bp
Accession: NZ_AP018938 Location: 943478..1065335 Organism: Streptococcus pneumoniae strain ATCC 49619 Replicon: chromosome
Accession: NZ_AP018938 Location: 943478..1065335 Organism: Streptococcus pneumoniae strain ATCC 49619 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL263_RS05035 () | 938495..939571 | + | 1077 | WP_000542473.1 | aspartate-semialdehyde dehydrogenase | - |
| EL263_RS05040 () | 939627..940562 | + | 936 | WP_050104772.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| EL263_RS05045 () | 940609..941982 | - | 1374 | WP_044727673.1 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | - |
| EL263_RS05050 () | 942118..942300 | - | 183 | WP_001117401.1 | 4-oxalocrotonate tautomerase | - |
| EL263_RS05055 () | 942424..943014 | + | 591 | WP_000068152.1 | thymidine kinase | - |
| EL263_RS05060 () | 943011..944090 | + | 1080 | WP_001028801.1 | peptide chain release factor 1 | - |
| EL263_RS05065 () | 944090..944929 | + | 840 | WP_000761917.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| EL263_RS05070 () | 944913..945515 | + | 603 | WP_000969303.1 | threonylcarbamoyl-AMP synthase | - |
| EL263_RS05075 () | 945517..945948 | + | 432 | WP_050085562.1 | GNAT family N-acetyltransferase | - |
| EL263_RS05080 () | 946010..947266 | + | 1257 | WP_016569738.1 | serine hydroxymethyltransferase | - |
| EL263_RS05085 () | 947274..948248 | + | 975 | WP_001812264.1 | nucleoid-associated protein | - |
| EL263_RS05090 () | 948248..948862 | + | 615 | WP_000476387.1 | cell wall hydrolase Pmp23 | - |
| EL263_RS05095 () | 948936..949910 | + | 975 | WP_001227766.1 | DUF1002 domain-containing protein | - |
| EL263_RS05100 () | 949984..951615 | + | 1632 | WP_050205396.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| EL263_RS05105 () | 951829..952107 | + | 279 | WP_050111442.1 | hypothetical protein | - |
| EL263_RS05110 () | 952353..952571 | + | 219 | WP_001207345.1 | helix-turn-helix transcriptional regulator | - |
| EL263_RS05120 () | 952964..953989 | + | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| EL263_RS05125 () | 953979..954986 | + | 1008 | WP_001244692.1 | Vitamin B12 import system permease protein BtuC | VF |
| EL263_RS05130 () | 954986..955993 | + | 1008 | WP_001180357.1 | Ribonuclease PH | VF |
| EL263_RS05135 () | 955993..956787 | + | 795 | WP_000677525.1 | hypothetical protein | VF |
| EL263_RS05140 () | 957175..957564 | + | 390 | WP_074017679.1 | restriction endonuclease subunit S | - |
| EL263_RS11455 () | 957536..957844 | + | 309 | WP_162499171.1 | hypothetical protein | - |
| EL263_RS05150 () | 958528..958689 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| EL263_RS05155 () | 958781..960464 | + | 1684 | Protein_965 | D-ribose pyranase ; Integrase | Integrase |
| EL263_RS05160 () | 960732..961298 | + | 567 | WP_000234988.1 | hypothetical protein | - |
| EL263_RS05165 () | 961623..961811 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| EL263_RS05170 () | 961873..962688 | + | 816 | WP_050221225.1 | ATP-grasp domain-containing protein | - |
| EL263_RS05175 () | 962688..963542 | + | 855 | WP_000900015.1 | ADP-ribosylglycohydrolase family protein | - |
| EL263_RS05180 () | 963654..964538 | + | 885 | WP_050221224.1 | diacylglycerol kinase family lipid kinase | - |
| EL263_RS05185 () | 964700..965404 | + | 705 | WP_001865184.1 | alpha amylase N-terminal ig-like domain-containing protein | - |
| EL263_RS05190 () | 965380..965835 | + | 456 | WP_001865186.1 | hypothetical protein | - |
| EL263_RS05195 () | 966280..966756 | + | 477 | WP_000579612.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| EL263_RS05200 () | 966756..967517 | + | 762 | WP_054387416.1 | zeta toxin family protein | Toxin Detail |
| EL263_RS05205 () | 967545..968321 | + | 777 | Protein_975 | hypothetical protein | - |
| EL263_RS05210 () | 968249..968701 | + | 453 | WP_078375108.1 | hypothetical protein | - |
| EL263_RS05215 () | 969520..969879 | + | 360 | WP_000003750.1 | hypothetical protein | - |
| EL263_RS05220 () | 969889..970254 | + | 366 | WP_000263054.1 | MobC family plasmid mobilization relaxosome protein | - |
| EL263_RS05225 () | 970241..972091 | + | 1851 | WP_054387417.1 | relaxase/mobilization nuclease domain-containing protein | - |
| EL263_RS05230 () | 972347..973782 | + | 1436 | Protein_980 | transposase | - |
| EL263_RS05235 () | 974020..974154 | - | 135 | Protein_981 | transposase family protein | - |
| EL263_RS05240 () | 974475..975428 | - | 954 | WP_001155339.1 | IS30 family transposase ISSpn8 | Transposase |
| EL263_RS05245 () | 975787..976601 | - | 815 | Protein_983 | IS5 family transposase IS1515 | Transposase |
| EL263_RS05255 () | 976640..977398 | + | 759 | Protein_984 | hypothetical protein | - |
| EL263_RS05260 () | 977395..978030 | + | 636 | WP_050221261.1 | chloramphenicol acetyltransferase | - |
| EL263_RS05265 () | 978098..979735 | + | 1638 | WP_000021543.1 | methionine--tRNA ligase | - |
| EL263_RS05270 () | 979836..980603 | + | 768 | WP_001061789.1 | tyrosine-protein phosphatase | - |
| EL263_RS05275 () | 981620..982612 | + | 993 | WP_024266136.1 | putative GTP-binding protein EngB | VF |
| EL263_RS05280 () | 982614..983432 | + | 819 | WP_000164265.1 | ABC-2 family transporter protein | - |
| EL263_RS05285 () | 983434..984219 | + | 786 | WP_000760754.1 | ABC transporter permease | - |
| EL263_RS05290 () | 984598..985793 | - | 1196 | Protein_991 | IS110 family transposase | - |
| EL263_RS05295 () | 986295..986498 | + | 204 | WP_000275922.1 | helix-turn-helix transcriptional regulator | - |
| EL263_RS11460 () | 986629..986781 | + | 153 | WP_001812617.1 | hypothetical protein | - |
| EL263_RS05300 () | 986948..988741 | + | 1794 | WP_054387418.1 | NADH pyrophosphatase ; Integrase | Integrase |
| EL263_RS05305 () | 988846..989433 | + | 588 | WP_001812626.1 | Type 1 glutamine amidotransferase-like domain-containing protein | - |
| EL263_RS05310 () | 989714..989961 | + | 248 | Protein_996 | aminoglycoside phosphotransferase | - |
| EL263_RS05315 () | 990066..990395 | + | 330 | Protein_997 | IS5 family transposase IS1381A | Transposase |
| EL263_RS05320 () | 990523..991752 | + | 1230 | WP_000703353.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| EL263_RS05325 () | 991773..994469 | + | 2697 | WP_000058189.1 | phosphoenolpyruvate carboxylase | - |
| EL263_RS05330 () | 994882..995886 | + | 1005 | WP_000792163.1 | hypothetical protein | VF |
| EL263_RS05335 () | 995955..996821 | + | 867 | WP_000637238.1 | ABC transporter permease | - |
| EL263_RS05340 () | 996818..997576 | + | 759 | WP_000125408.1 | ABC transporter ATP-binding protein | - |
| EL263_RS05345 () | 997666..999426 | + | 1761 | WP_000227891.1 | DNA primase | - |
| EL263_RS05350 () | 999429..1000538 | + | 1110 | WP_000201898.1 | RNA polymerase sigma factor RpoD | - |
| EL263_RS05355 () | 1000552..1000881 | + | 330 | WP_000331928.1 | metal-sulfur cluster assembly factor | - |
| EL263_RS05360 () | 1000996..1002039 | + | 1044 | WP_000412280.1 | alpha-galactosylglucosyldiacylglycerol synthase | - |
| EL263_RS05365 () | 1002055..1003380 | + | 1326 | WP_044792168.1 | glycosyltransferase family 4 protein | - |
| EL263_RS05370 () | 1003411..1003587 | + | 177 | WP_001256250.1 | PspC domain-containing protein | - |
| EL263_RS05375 () | 1003646..1003780 | + | 135 | WP_000863859.1 | DUF4044 domain-containing protein | - |
| EL263_RS05380 () | 1003844..1005154 | + | 1311 | WP_054387419.1 | GTPase ObgE | - |
| EL263_RS05385 () | 1005164..1005322 | + | 159 | WP_001808548.1 | hypothetical protein | - |
| EL263_RS11330 () | 1006341..1006415 | - | 75 | Protein_1012 | UDP-galactopyranose mutase | - |
| EL263_RS05390 () | 1006558..1007817 | + | 1260 | WP_054387420.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| EL263_RS05395 () | 1007833..1008384 | + | 552 | WP_001028736.1 | GNAT family N-acetyltransferase | - |
| EL263_RS05400 () | 1008377..1009654 | + | 1278 | WP_000033830.1 | CBS-HotDog domain-containing transcription factor SpxR | - |
| EL263_RS05405 () | 1009670..1010530 | + | 861 | WP_000631540.1 | methionyl aminopeptidase | - |
| EL263_RS05410 () | 1010753..1010863 | + | 111 | Protein_1017 | IS5 family transposase ISSpn7 | Transposase |
| EL263_RS05415 () | 1010909..1011713 | + | 805 | WP_114880848.1 | IS5 family transposase | - |
| EL263_RS05420 () | 1011905..1014196 | + | 2292 | WP_000992855.1 | DNA helicase PcrA | - |
| EL263_RS05425 () | 1014239..1014919 | + | 681 | WP_000286922.1 | DNA repair protein RadC | - |
| EL263_RS05430 () | 1014916..1015605 | - | 690 | WP_000743330.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| EL263_RS05435 () | 1015623..1016264 | - | 642 | WP_000653403.1 | redox-sensing transcriptional repressor Rex | - |
| EL263_RS05440 () | 1016347..1016562 | - | 216 | WP_000462487.1 | DUF4649 family protein | - |
| EL263_RS05445 () | 1016570..1016917 | - | 348 | WP_000863509.1 | DUF1831 domain-containing protein | - |
| EL263_RS05450 () | 1016922..1018037 | - | 1116 | WP_000639664.1 | cysteine desulfurase | - |
| EL263_RS05455 () | 1018047..1019006 | - | 960 | WP_001283813.1 | ribose-phosphate diphosphokinase | - |
| EL263_RS05460 () | 1019119..1019688 | - | 570 | WP_000681293.1 | CYTH domain-containing protein | - |
| EL263_RS05465 () | 1019816..1020487 | + | 672 | WP_000171676.1 | GTP pyrophosphokinase family protein | - |
| EL263_RS05470 () | 1020471..1021289 | + | 819 | WP_000799053.1 | NAD kinase | - |
| EL263_RS05475 () | 1021286..1022182 | + | 897 | WP_001210004.1 | RluA family pseudouridine synthase | - |
| EL263_RS05480 () | 1022226..1023200 | + | 975 | WP_000451586.1 | phosphate acetyltransferase | - |
| EL263_RS05485 () | 1023462..1024788 | - | 1327 | Protein_1032 | ISL3 family transposase | - |
| EL263_RS05490 () | 1024970..1025269 | - | 300 | WP_000981526.1 | YbaB/EbfC family nucleoid-associated protein | - |
| EL263_RS05495 () | 1025671..1026369 | + | 699 | WP_000509041.1 | DUF1275 domain-containing protein | - |
| EL263_RS05500 () | 1026557..1026871 | + | 315 | WP_000109141.1 | 50S ribosomal protein L21 | - |
| EL263_RS05505 () | 1026887..1027231 | + | 345 | WP_000613699.1 | ribosomal-processing cysteine protease Prp | - |
| EL263_RS05510 () | 1027248..1027541 | + | 294 | WP_000916509.1 | 50S ribosomal protein L27 | - |
| EL263_RS05520 () | 1027852..1028057 | - | 206 | Protein_1038 | ABC transporter substrate-binding protein | - |
| EL263_RS05525 () | 1028495..1029412 | + | 918 | WP_000587443.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| EL263_RS05530 () | 1029505..1030353 | - | 849 | WP_000592059.1 | YitT family protein | - |
| EL263_RS05535 () | 1030495..1031334 | + | 840 | WP_000161392.1 | DegV family protein | - |
| EL263_RS05540 () | 1031441..1031716 | + | 276 | WP_001284639.1 | HU family DNA-binding protein | - |
| EL263_RS05545 () | 1032141..1034042 | + | 1902 | WP_000584868.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| EL263_RS05550 () | 1034045..1034908 | + | 864 | Protein_1044 | XRE/MutR family transcriptional regulator | - |
| EL263_RS05555 () | 1034988..1036166 | + | 1179 | WP_001083024.1 | MFS transporter | - |
| EL263_RS05560 () | 1036259..1038217 | + | 1959 | WP_001042597.1 | NAD-dependent DNA ligase LigA | - |
| EL263_RS05565 () | 1038329..1040608 | + | 2280 | WP_054387423.1 | type I pullulanase | - |
| EL263_RS05570 () | 1041166..1042590 | + | 1425 | WP_000199371.1 | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase | - |
| EL263_RS05575 () | 1042966..1044894 | + | 1929 | WP_000370242.1 | 1,4-alpha-glucan branching protein GlgB | - |
| EL263_RS05580 () | 1044884..1046026 | + | 1143 | WP_000787276.1 | glucose-1-phosphate adenylyltransferase | - |
| EL263_RS05585 () | 1046016..1047155 | + | 1140 | WP_000687070.1 | glucose-1-phosphate adenylyltransferase subunit GlgD | - |
| EL263_RS05590 () | 1047152..1048585 | + | 1434 | WP_054387424.1 | glycogen synthase GlgA | - |
| EL263_RS11465 () | 1048644..1049015 | + | 372 | WP_001808482.1 | Crossover junction endodeoxyribonuclease RuvC | VF |
| EL263_RS11470 () | 1049056..1049289 | + | 234 | WP_161801469.1 | HAD hydrolase family protein | - |
| EL263_RS05600 () | 1049298..1050413 | + | 1116 | WP_000706440.1 | glycerate kinase | - |
| EL263_RS05605 () | 1050410..1050856 | - | 447 | WP_054387425.1 | YueI family protein | - |
| EL263_RS05610 () | 1051020..1052324 | + | 1305 | WP_000022815.1 | phosphopyruvate hydratase | - |
| EL263_RS05615 () | 1052462..1052908 | - | 447 | WP_078162495.1 | tyrosine-type recombinase/integrase | - |
| EL263_RS05620 () | 1052808..1053020 | - | 213 | Protein_1059 | transposase | - |
| EL263_RS05625 () | 1053118..1053636 | - | 519 | Protein_1060 | IS630 family transposase IS630-Spn1 | Transposase |
| EL263_RS05630 () | 1053690..1053865 | + | 176 | Protein_1061 | diacylglycerol kinase family lipid kinase | - |
| EL263_RS05635 () | 1054065..1057340 | + | 3276 | WP_114880830.1 | ATP-dependent nuclease subunit B | - |
| EL263_RS05640 () | 1057337..1060987 | + | 3651 | WP_050104893.1 | helicase-exonuclease AddAB subunit AddA | - |
| EL263_RS11475 () | 1060949..1061116 | - | 168 | WP_001828683.1 | hypothetical protein | - |
| EL263_RS05655 () | 1061247..1062425 | + | 1179 | WP_000174787.1 | hypothetical protein | - |
| EL263_RS05660 () | 1062634..1068525 | + | 5892 | WP_054387427.1 | immunoglobulin A1 protease | - |
| EL263_RS05665 () | 1068577..1068780 | + | 204 | WP_078102781.1 | LPXTG cell wall anchor domain-containing protein | - |
| EL263_RS05670 () | 1068947..1069798 | + | 852 | WP_000201299.1 | ribosome biogenesis GTPase YlqF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|