MGE detailed information
MGE type: Genomic_island MGE length: 27640 bp
Accession: NZ_AP018784 Location: 471220..498859 Organism: Escherichia coli strain SK1144 Replicon: chromosome
Accession: NZ_AP018784 Location: 471220..498859 Organism: Escherichia coli strain SK1144 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DAECLI1_RS02175 () | 468068..468787 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| DAECLI1_RS02180 () | 468784..470415 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| DAECLI1_RS02185 () | 470596..470826 | + | 231 | WP_000371715.1 | (4Fe-4S)-binding protein | - |
| DAECLI1_RS02190 () | 470838..471110 | + | 273 | WP_000405645.1 | N-acetyltransferase | - |
| DAECLI1_RS02195 () | 471220..473757 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| DAECLI1_RS02200 () | 473790..474482 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| DAECLI1_RS02205 () | 474547..475071 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| DAECLI1_RS02210 () | 475445..479284 | + | 3840 | WP_001528154.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| DAECLI1_RS02215 () | 480182..481012 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| DAECLI1_RS02225 () | 482168..486097 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| DAECLI1_RS02230 () | 486311..486583 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| DAECLI1_RS02235 () | 486811..487107 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| DAECLI1_RS02240 () | 487135..487308 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| DAECLI1_RS02245 () | 487427..488944 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| DAECLI1_RS02250 () | 489181..490638 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| DAECLI1_RS02255 () | 490697..492844 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| DAECLI1_RS02260 () | 492924..494258 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| DAECLI1_RS02270 () | 494624..496162 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| DAECLI1_RS02275 () | 497045..497371 | - | 327 | WP_000779482.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DAECLI1_RS02280 () | 497368..497631 | - | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| DAECLI1_RS02285 () | 497703..498569 | - | 867 | WP_001290180.1 | DUF4942 domain-containing protein | - |
| DAECLI1_RS02290 () | 498662..498859 | - | 198 | WP_000839238.1 | DUF957 domain-containing protein | - |
| DAECLI1_RS02295 () | 498871..499359 | - | 489 | WP_021535504.1 | hypothetical protein | - |
| DAECLI1_RS02300 () | 499356..499733 | - | 378 | WP_000854720.1 | TA system toxin CbtA family protein | - |
| DAECLI1_RS02305 () | 499823..500191 | - | 369 | WP_001539669.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| DAECLI1_RS02310 () | 500271..500492 | - | 222 | WP_000692349.1 | DUF987 domain-containing protein | - |
| DAECLI1_RS02315 () | 500579..501055 | - | 477 | WP_001186788.1 | RadC family protein | - |
| DAECLI1_RS02320 () | 501071..501556 | - | 486 | WP_000849596.1 | antirestriction protein | - |
| DAECLI1_RS02325 () | 501611..502429 | - | 819 | WP_001234642.1 | DUF945 domain-containing protein | - |
| DAECLI1_RS02335 () | 502529..502762 | - | 234 | WP_001119719.1 | DUF905 family protein | - |
| DAECLI1_RS02340 () | 502848..503252 | + | 405 | WP_001539664.1 | IS66 family insertion sequence hypothetical protein | - |
| DAECLI1_RS02345 () | 503249..503596 | + | 348 | WP_000612617.1 | IS66 family insertion sequence element accessory protein TnpB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|