MGE detailed information
MGE type: Prophage MGE length: 42355 bp
Accession: NZ_AP018585 Location: 1815630..1857984 Organism: Staphylococcus caprae strain JMUB145 Replicon: chromosome
Accession: NZ_AP018585 Location: 1815630..1857984 Organism: Staphylococcus caprae strain JMUB145 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL290_RS08525 () | 1811174..1811614 | + | 441 | WP_002442405.1 | N-acetyltransferase | - |
| EL290_RS08530 () | 1811849..1812535 | - | 687 | WP_002442403.1 | YjjG family noncanonical pyrimidine nucleotidase | - |
| EL290_RS08535 () | 1812654..1812788 | - | 135 | WP_002442402.1 | beta-class phenol-soluble modulin | - |
| EL290_RS08540 () | 1812837..1812971 | - | 135 | WP_002442400.1 | beta-class phenol-soluble modulin | - |
| EL290_RS08545 () | 1813025..1813159 | - | 135 | WP_002442398.1 | beta-class phenol-soluble modulin | - |
| EL290_RS08550 () | 1813195..1813329 | - | 135 | WP_002442396.1 | beta-class phenol-soluble modulin | - |
| EL290_RS08555 () | 1813367..1813501 | - | 135 | WP_002442394.1 | beta-class phenol-soluble modulin | - |
| EL290_RS08565 () | 1814259..1815431 | + | 1173 | WP_002442393.1 | MFS transporter | - |
| EL290_RS08570 () | 1815630..1817086 | - | 1457 | Protein_1642 | N-acetylmuramoyl-L-alanine amidase | - |
| EL290_RS08575 () | 1817096..1817395 | - | 300 | WP_126493787.1 | phage holin | - |
| EL290_RS08580 () | 1817441..1817587 | - | 147 | WP_126493788.1 | XkdX family protein | - |
| EL290_RS08585 () | 1817580..1817960 | - | 381 | WP_126493789.1 | hypothetical protein | - |
| EL290_RS08590 () | 1817975..1819600 | - | 1626 | WP_126493790.1 | BppU family phage baseplate upper protein | - |
| EL290_RS08595 () | 1819655..1821559 | - | 1905 | WP_126493791.1 | Bifunctional autolysin | VF |
| EL290_RS08600 () | 1821610..1821996 | - | 387 | WP_126493792.1 | hypothetical protein | - |
| EL290_RS08605 () | 1821980..1822399 | - | 420 | WP_070872838.1 | hypothetical protein | - |
| EL290_RS08610 () | 1822415..1823575 | - | 1161 | WP_126493793.1 | BppU family phage baseplate upper protein | - |
| EL290_RS08615 () | 1823589..1825466 | - | 1878 | WP_126493794.1 | DUF2817 domain-containing protein | - |
| EL290_RS08620 () | 1825467..1826726 | - | 1260 | WP_126493795.1 | phage tail protein | - |
| EL290_RS08625 () | 1826737..1827696 | - | 960 | WP_070872845.1 | phage tail family protein | - |
| EL290_RS08630 () | 1827708..1831583 | - | 3876 | WP_126493796.1 | phage tail protein | - |
| EL290_RS08635 () | 1831598..1831942 | - | 345 | WP_126493797.1 | hypothetical protein | - |
| EL290_RS08640 () | 1831987..1832346 | - | 360 | WP_095323405.1 | tail assembly chaperone | - |
| EL290_RS08645 () | 1832407..1832961 | - | 555 | WP_095323406.1 | phage major tail protein, TP901-1 family | - |
| EL290_RS08650 () | 1833007..1833396 | - | 390 | WP_126493798.1 | hypothetical protein | - |
| EL290_RS08655 () | 1833407..1833757 | - | 351 | WP_126493799.1 | HK97 gp10 family phage protein | - |
| EL290_RS08660 () | 1833759..1834061 | - | 303 | WP_126493800.1 | hypothetical protein | - |
| EL290_RS08665 () | 1834058..1834387 | - | 330 | WP_126493801.1 | phage head-tail connector protein | - |
| EL290_RS08670 () | 1834389..1834658 | - | 270 | WP_126493802.1 | hypothetical protein | - |
| EL290_RS08675 () | 1834680..1835606 | - | 927 | WP_126493803.1 | phage major capsid protein | - |
| EL290_RS08680 () | 1835624..1836238 | - | 615 | WP_126493804.1 | DUF4355 domain-containing protein | - |
| EL290_RS12675 () | 1836486..1836638 | - | 153 | WP_170080849.1 | hypothetical protein | - |
| EL290_RS12680 () | 1836625..1836783 | - | 159 | WP_170080850.1 | hypothetical protein | - |
| EL290_RS08685 () | 1836783..1837733 | - | 951 | WP_126493805.1 | minor capsid protein | - |
| EL290_RS08690 () | 1837740..1839275 | - | 1536 | WP_126493806.1 | phage portal protein | - |
| EL290_RS08695 () | 1839287..1840570 | - | 1284 | WP_126493807.1 | PBSX family phage terminase large subunit | - |
| EL290_RS08700 () | 1840573..1840959 | - | 387 | WP_126493808.1 | DNA-binding protein | - |
| EL290_RS08705 () | 1840996..1841196 | - | 201 | WP_126493809.1 | hypothetical protein | - |
| EL290_RS08710 () | 1841416..1841832 | - | 417 | WP_126493810.1 | transcriptional regulator | - |
| EL290_RS08715 () | 1841903..1842073 | - | 171 | WP_126493811.1 | regulator | - |
| EL290_RS08720 () | 1842079..1842219 | - | 141 | WP_126493812.1 | DUF1381 domain-containing protein | - |
| EL290_RS08725 () | 1842256..1842681 | - | 426 | WP_002442331.1 | dUTP diphosphatase | - |
| EL290_RS12685 () | 1842681..1842851 | - | 171 | WP_153227380.1 | hypothetical protein | - |
| EL290_RS08730 () | 1842895..1842987 | - | 93 | WP_126493813.1 | DUF1024 family protein | - |
| EL290_RS12690 () | 1842989..1843165 | - | 177 | WP_002442327.1 | hypothetical protein | - |
| EL290_RS08735 () | 1843152..1843421 | - | 270 | WP_126493814.1 | hypothetical protein | - |
| EL290_RS08740 () | 1843427..1843854 | - | 428 | Protein_1680 | adenine methyltransferase | - |
| EL290_RS12695 () | 1843868..1844026 | - | 159 | WP_002469958.1 | hypothetical protein | - |
| EL290_RS08750 () | 1844328..1844522 | - | 195 | WP_126493816.1 | hypothetical protein | - |
| EL290_RS08755 () | 1844515..1844922 | - | 408 | WP_002442307.1 | DUF1064 domain-containing protein | - |
| EL290_RS08760 () | 1844931..1845176 | - | 246 | WP_126493817.1 | hypothetical protein | - |
| EL290_RS12700 () | 1845179..1845334 | - | 156 | WP_168995397.1 | hypothetical protein | - |
| EL290_RS08765 () | 1845328..1846098 | - | 771 | WP_126493818.1 | ATP-binding protein | - |
| EL290_RS08770 () | 1846109..1846873 | - | 765 | WP_126493819.1 | conserved phage C-terminal domain-containing protein | - |
| EL290_RS08775 () | 1846860..1847540 | - | 681 | WP_126493820.1 | hypothetical protein | - |
| EL290_RS08780 () | 1847541..1848092 | - | 552 | WP_126493821.1 | NUMOD4 motif-containing HNH endonuclease | - |
| EL290_RS08785 () | 1848105..1848524 | - | 420 | WP_126493822.1 | single-stranded DNA-binding protein | - |
| EL290_RS08790 () | 1848521..1849168 | - | 648 | WP_126493823.1 | ERF family protein | - |
| EL290_RS08795 () | 1849161..1849382 | - | 222 | WP_095323496.1 | DUF2483 family protein | - |
| EL290_RS08800 () | 1849382..1849630 | - | 249 | WP_126493824.1 | chordopoxvirus fusion protein | - |
| EL290_RS12705 () | 1849692..1849865 | - | 174 | WP_162837223.1 | hypothetical protein | - |
| EL290_RS08805 () | 1849879..1850088 | - | 210 | WP_002442287.1 | hypothetical protein | - |
| EL290_RS08810 () | 1850176..1850382 | + | 207 | WP_002436523.1 | hypothetical protein | - |
| EL290_RS12710 () | 1850368..1850517 | - | 150 | WP_172595384.1 | hypothetical protein | - |
| EL290_RS08815 () | 1850623..1851384 | - | 762 | WP_126493825.1 | phage regulatory protein/antirepressor Ant | - |
| EL290_RS08820 () | 1851403..1851633 | - | 231 | WP_126493826.1 | helix-turn-helix domain-containing protein | - |
| EL290_RS08825 () | 1851785..1852099 | + | 315 | WP_087671659.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| EL290_RS08830 () | 1852111..1852575 | + | 465 | WP_126493827.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| EL290_RS08835 () | 1852745..1853116 | + | 372 | Protein_1702 | Abi family protein | - |
| EL290_RS08840 () | 1853199..1855106 | + | 1908 | WP_095323322.1 | N-6 DNA methylase | - |
| EL290_RS08845 () | 1855090..1856109 | + | 1020 | WP_095323321.1 | restriction endonuclease subunit S | - |
| EL290_RS08850 () | 1856170..1857216 | + | 1047 | WP_126493828.1 | IS91 family transposase ISCARN110 | Transposase |
| EL290_RS08855 () | 1857475..1857984 | - | 510 | WP_002442266.1 | metallophosphoesterase | - |
| EL290_RS08860 () | 1857977..1858564 | - | 588 | WP_037541367.1 | XTP/dITP diphosphatase | - |
| EL290_RS08865 () | 1858586..1859386 | - | 801 | WP_126493829.1 | glutamate racemase | - |
| EL290_RS08870 () | 1859609..1860445 | - | 837 | WP_002442260.1 | succinate dehydrogenase iron-sulfur subunit | - |
| EL290_RS08875 () | 1860445..1862211 | - | 1767 | WP_002442258.1 | succinate dehydrogenase flavoprotein subunit | - |
| EL290_RS08880 () | 1862269..1862883 | - | 615 | WP_002442256.1 | succinate dehydrogenase cytochrome b558 subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|