MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 52561 bp
Accession: NZ_AP017649 Location: 1190790..1243350 Organism: Dehalococcoides mccartyi strain UCH-ATV1 Replicon: chromosome
Accession: NZ_AP017649 Location: 1190790..1243350 Organism: Dehalococcoides mccartyi strain UCH-ATV1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DEHALATV1_RS06295 () | 1186807..1187517 | + | 711 | WP_096476941.1 | TIGR01906 family membrane protein | - |
| DEHALATV1_RS06300 () | 1187548..1187961 | - | 414 | WP_041343117.1 | hypothetical protein | - |
| DEHALATV1_RS06305 () | 1188282..1188497 | - | 216 | WP_041343120.1 | zinc ribbon domain-containing protein | - |
| DEHALATV1_RS06325 () | 1189723..1191180 | + | 1458 | WP_096476942.1 | anthranilate synthase component I | - |
| DEHALATV1_RS06330 () | 1191164..1191766 | + | 603 | WP_023652758.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| DEHALATV1_RS06335 () | 1191759..1192784 | + | 1026 | WP_096476943.1 | anthranilate phosphoribosyltransferase | - |
| DEHALATV1_RS06340 () | 1192789..1193568 | + | 780 | WP_096476944.1 | indole-3-glycerol phosphate synthase TrpC | - |
| DEHALATV1_RS06345 () | 1193565..1194224 | + | 660 | WP_096476945.1 | phosphoribosylanthranilate isomerase | - |
| DEHALATV1_RS06350 () | 1194218..1195240 | + | 1023 | WP_096476946.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| DEHALATV1_RS06355 () | 1195228..1196427 | + | 1200 | WP_096476947.1 | tryptophan synthase subunit beta | - |
| DEHALATV1_RS06360 () | 1196424..1197191 | + | 768 | WP_096476948.1 | tryptophan synthase subunit alpha | - |
| DEHALATV1_RS06365 () | 1197438..1198025 | + | 588 | WP_096476949.1 | FAD-dependent thymidylate synthase | - |
| DEHALATV1_RS06370 () | 1198266..1199087 | - | 822 | WP_096476950.1 | Ubiquinone biosynthesis O-methyltransferase | VF |
| DEHALATV1_RS06375 () | 1199362..1199808 | + | 447 | WP_041343679.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| DEHALATV1_RS06380 () | 1200160..1200546 | + | 387 | WP_096476951.1 | fluoride efflux transporter CrcB | - |
| DEHALATV1_RS06385 () | 1200548..1200898 | + | 351 | WP_041343155.1 | DUF190 domain-containing protein | - |
| DEHALATV1_RS06390 () | 1200982..1201758 | - | 777 | WP_096476952.1 | winged helix-turn-helix transcriptional regulator | - |
| DEHALATV1_RS06395 () | 1201881..1202399 | + | 519 | WP_096476953.1 | GyrI-like domain-containing protein | - |
| DEHALATV1_RS06400 () | 1202454..1203851 | - | 1398 | WP_041343164.1 | MFS transporter | - |
| DEHALATV1_RS06405 () | 1203911..1205641 | - | 1731 | WP_096476954.1 | ferrous iron transporter B | - |
| DEHALATV1_RS06410 () | 1205638..1205883 | - | 246 | WP_023652781.1 | ferrous iron transport protein A | - |
| DEHALATV1_RS06415 () | 1205924..1206349 | - | 426 | WP_041343170.1 | transcriptional repressor | - |
| DEHALATV1_RS06420 () | 1206477..1206941 | + | 465 | WP_052470950.1 | SsrA-binding protein SmpB | - |
| DEHALATV1_RS06435 () | 1207286..1208893 | - | 1608 | Protein_1237 | hypothetical protein ; Integrase | Integrase |
| DEHALATV1_RS06440 () | 1208886..1209065 | - | 180 | WP_012984501.1 | hypothetical protein | - |
| DEHALATV1_RS06445 () | 1209067..1209684 | - | 618 | WP_012984502.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| DEHALATV1_RS06450 () | 1209684..1210133 | - | 450 | WP_046961367.1 | hypothetical protein | - |
| DEHALATV1_RS06455 () | 1210188..1210379 | - | 192 | WP_012984504.1 | hypothetical protein | - |
| DEHALATV1_RS06460 () | 1210376..1211011 | - | 636 | WP_012882539.1 | ParB N-terminal domain-containing protein | - |
| DEHALATV1_RS06465 () | 1211008..1211649 | - | 642 | Protein_1243 | DNA methyltransferase | - |
| DEHALATV1_RS06470 () | 1211697..1213895 | - | 2199 | WP_046961368.1 | DUF3631 domain-containing protein | - |
| DEHALATV1_RS06475 () | 1213973..1214728 | - | 756 | WP_012882542.1 | hypothetical protein | - |
| DEHALATV1_RS06480 () | 1214855..1215883 | - | 1029 | WP_012882543.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| DEHALATV1_RS06485 () | 1215880..1216533 | - | 654 | WP_012882544.1 | hypothetical protein | - |
| DEHALATV1_RS06490 () | 1216562..1217353 | - | 792 | WP_012984506.1 | hypothetical protein | - |
| DEHALATV1_RS06495 () | 1217393..1218649 | - | 1257 | WP_012882546.1 | DNA methyltransferase | - |
| DEHALATV1_RS06500 () | 1218771..1219487 | - | 717 | WP_012882547.1 | hypothetical protein | - |
| DEHALATV1_RS06505 () | 1219730..1222219 | + | 2490 | WP_046961369.1 | DEAD/DEAH box helicase family protein | - |
| DEHALATV1_RS06510 () | 1222287..1223084 | + | 798 | WP_012882549.1 | hypothetical protein | - |
| DEHALATV1_RS06515 () | 1223140..1224804 | - | 1665 | WP_096477078.1 | hypothetical protein ; Integrase | Integrase |
| DEHALATV1_RS06520 () | 1224794..1224973 | - | 180 | WP_012984511.1 | hypothetical protein | - |
| DEHALATV1_RS06525 () | 1224977..1225579 | - | 603 | WP_012882527.1 | IS607 family transposase ISCbt3 | Transposase |
| DEHALATV1_RS06530 () | 1225576..1226031 | - | 456 | WP_012882528.1 | hypothetical protein | - |
| DEHALATV1_RS06540 () | 1226291..1226926 | - | 636 | WP_012882529.1 | ParB/RepB/Spo0J family partition protein | - |
| DEHALATV1_RS06545 () | 1226927..1227658 | - | 732 | WP_012882530.1 | hypothetical protein | - |
| DEHALATV1_RS06550 () | 1227646..1229751 | - | 2106 | WP_012882531.1 | DUF3631 domain-containing protein | - |
| DEHALATV1_RS07590 () | 1229770..1230636 | + | 867 | WP_012882532.1 | rubredoxin | - |
| DEHALATV1_RS06560 () | 1230998..1232167 | - | 1170 | WP_012882533.1 | 4Fe-4S binding protein | - |
| DEHALATV1_RS06565 () | 1232340..1232621 | - | 282 | WP_012882534.1 | hypothetical protein | - |
| DEHALATV1_RS06570 () | 1232662..1234221 | - | 1560 | WP_061977500.1 | reductive dehalogenase | - |
| DEHALATV1_RS06575 () | 1234494..1236146 | - | 1653 | WP_096476955.1 | hypothetical protein ; Integrase | Integrase |
| DEHALATV1_RS06580 () | 1236133..1236360 | - | 228 | WP_096476956.1 | hypothetical protein | - |
| DEHALATV1_RS06585 () | 1236378..1236572 | - | 195 | WP_023652786.1 | hypothetical protein | - |
| DEHALATV1_RS06590 () | 1236577..1237200 | - | 624 | WP_096476957.1 | ParB N-terminal domain-containing protein | - |
| DEHALATV1_RS06595 () | 1237187..1237900 | - | 714 | WP_023652788.1 | hypothetical protein | - |
| DEHALATV1_RS07560 () | 1237960..1238127 | - | 168 | WP_155760401.1 | hypothetical protein | - |
| DEHALATV1_RS06600 () | 1238217..1238678 | + | 462 | WP_096476958.1 | hypothetical protein | - |
| DEHALATV1_RS06605 () | 1238762..1239214 | + | 453 | WP_146048216.1 | hypothetical protein | - |
| DEHALATV1_RS06610 () | 1239293..1239637 | - | 345 | WP_096476960.1 | endoribonuclease MazF | Toxin Detail |
| DEHALATV1_RS06615 () | 1239631..1239873 | - | 243 | WP_096476961.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| DEHALATV1_RS06620 () | 1240166..1241152 | + | 987 | Protein_1274 | precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE | - |
| DEHALATV1_RS06625 () | 1241263..1241673 | - | 411 | Protein_1275 | recombinase family protein | - |
| DEHALATV1_RS06630 () | 1241896..1242390 | - | 495 | WP_096476962.1 | hypothetical protein | - |
| DEHALATV1_RS06640 () | 1243057..1243560 | + | 504 | WP_096476964.1 | NUDIX domain-containing protein | - |
| DEHALATV1_RS06645 () | 1243655..1243933 | - | 279 | Protein_1278 | recombinase family protein | - |
| DEHALATV1_RS06650 () | 1244106..1244576 | + | 471 | WP_096476966.1 | zinc ribbon domain-containing protein | - |
| DEHALATV1_RS06655 () | 1244762..1246195 | + | 1434 | WP_096477079.1 | DUF2779 domain-containing protein | - |
| DEHALATV1_RS06660 () | 1246245..1246871 | + | 627 | WP_096476967.1 | hypothetical protein | - |
| DEHALATV1_RS07565 () | 1246942..1247241 | + | 300 | Protein_1282 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|