MGE detailed information
MGE type: Genomic_island MGE length: 73067 bp
Accession: NZ_AP017620 Location: 4710049..4783115 Organism: Escherichia coli strain MRY15-131 Replicon: chromosome
Accession: NZ_AP017620 Location: 4710049..4783115 Organism: Escherichia coli strain MRY15-131 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPY99_RS23690 () | 4706454..4707173 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| CPY99_RS23695 () | 4707170..4708801 | - | 1632 | WP_061092758.1 | sensor histidine kinase | - |
| CPY99_RS23700 () | 4708982..4709212 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| CPY99_RS23705 () | 4709224..4709496 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CPY99_RS23710 () | 4709725..4710021 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| CPY99_RS23715 () | 4710049..4710222 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| CPY99_RS23720 () | 4710341..4711858 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| CPY99_RS23725 () | 4712095..4713552 | - | 1458 | WP_061092757.1 | dipeptide/tripeptide permease DtpC | - |
| CPY99_RS23730 () | 4713611..4715758 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| CPY99_RS23735 () | 4715838..4717172 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CPY99_RS23745 () | 4717538..4719076 | - | 1539 | WP_061092756.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CPY99_RS23755 () | 4719959..4720285 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CPY99_RS23760 () | 4720282..4720545 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| CPY99_RS23765 () | 4720617..4721483 | - | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| CPY99_RS23770 () | 4721568..4721765 | - | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| CPY99_RS23775 () | 4721777..4722268 | - | 492 | WP_096427331.1 | hypothetical protein | - |
| CPY99_RS23780 () | 4722265..4722642 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| CPY99_RS23785 () | 4722689..4723063 | - | 375 | WP_032153712.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| CPY99_RS23790 () | 4723143..4723364 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| CPY99_RS23795 () | 4723433..4723909 | - | 477 | WP_001186715.1 | RadC family protein | - |
| CPY99_RS23805 () | 4723925..4724410 | - | 486 | WP_032153711.1 | antirestriction protein | - |
| CPY99_RS23810 () | 4724502..4725320 | - | 819 | WP_001234693.1 | DUF945 domain-containing protein | - |
| CPY99_RS23815 () | 4725411..4725620 | - | 210 | WP_023155727.1 | DUF905 family protein | - |
| CPY99_RS23820 () | 4725650..4726327 | - | 678 | WP_023155728.1 | hypothetical protein | - |
| CPY99_RS23825 () | 4726446..4727330 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| CPY99_RS23830 () | 4727437..4728369 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| CPY99_RS23835 () | 4728366..4729175 | - | 810 | WP_032153709.1 | hypothetical protein | - |
| CPY99_RS23850 () | 4730926..4731657 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| CPY99_RS23855 () | 4731751..4732408 | - | 658 | Protein_4394 | transposase | - |
| CPY99_RS23860 () | 4732842..4734446 | + | 1605 | WP_001067608.1 | DUF3987 domain-containing protein | - |
| CPY99_RS23865 () | 4736042..4736608 | + | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| CPY99_RS27245 () | 4736728..4736877 | - | 150 | WP_001421645.1 | hypothetical protein | - |
| CPY99_RS27090 () | 4736892..4737464 | + | 573 | WP_032153703.1 | hypothetical protein | - |
| CPY99_RS23875 () | 4737533..4737769 | + | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| CPY99_RS23880 () | 4738038..4738586 | + | 549 | WP_032153702.1 | hypothetical protein | - |
| CPY99_RS23885 () | 4738605..4738853 | - | 249 | WP_001349534.1 | osmoprotectant transport activator ProQ | - |
| CPY99_RS23890 () | 4738922..4739113 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| CPY99_RS23900 () | 4739516..4740207 | - | 692 | Protein_4403 | IS1 family transposase | - |
| CPY99_RS23905 () | 4740267..4740443 | + | 177 | Protein_4404 | transketolase family protein | - |
| CPY99_RS23910 () | 4740706..4740819 | + | 114 | WP_131501864.1 | transposase | - |
| CPY99_RS23920 () | 4741670..4742236 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| CPY99_RS23930 () | 4742477..4743292 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| CPY99_RS23935 () | 4743353..4744156 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| CPY99_RS23940 () | 4744156..4744992 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| CPY99_RS23950 () | 4745298..4745540 | + | 243 | WP_000844627.1 | transposase | - |
| CPY99_RS23955 () | 4745572..4746222 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CPY99_RS23960 () | 4746328..4747527 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| CPY99_RS23965 () | 4747494..4747682 | - | 189 | Protein_4413 | IS91 family transposase | - |
| CPY99_RS23970 () | 4747794..4748099 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| CPY99_RS23975 () | 4748127..4749362 | - | 1236 | WP_096427332.1 | Bicyclomycin resistance protein | ARG |
| CPY99_RS27320 () | 4749579..4750025 | - | 447 | Protein_4416 | DUF3363 domain-containing protein | - |
| CPY99_RS23985 () | 4750494..4751150 | - | 657 | Protein_4417 | IS91-like element ISVsa3 family transposase | - |
| CPY99_RS23990 () | 4751084..4751362 | - | 279 | WP_001349530.1 | P fimbrial regulatory protein KS71A | VF |
| CPY99_RS24005 () | 4751785..4752099 | + | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| CPY99_RS24010 () | 4752306..4752569 | + | 264 | Protein_4420 | Pap fimbrial major pilin protein | VF |
| CPY99_RS24020 () | 4753020..4754252 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| CPY99_RS24025 () | 4754403..4755564 | - | 1162 | Protein_4422 | IS3 family transposase IS3 | Transposase |
| CPY99_RS24030 () | 4755732..4756712 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| CPY99_RS24035 () | 4756709..4757653 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| CPY99_RS24040 () | 4757656..4758738 | - | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| CPY99_RS24050 () | 4759205..4759471 | + | 267 | WP_032153698.1 | MazG-like family protein | - |
| CPY99_RS24055 () | 4759771..4760285 | - | 515 | Protein_4427 | ISL3 family transposase ISEc38 | Transposase |
| CPY99_RS24060 () | 4760893..4764306 | + | 3414 | WP_096427333.1 | DEAD/DEAH box helicase family protein | - |
| CPY99_RS24065 () | 4764370..4766004 | + | 1635 | WP_000627725.1 | type I restriction-modification system subunit M | - |
| CPY99_RS24070 () | 4766001..4767119 | + | 1119 | WP_000742121.1 | restriction endonuclease subunit S | - |
| CPY99_RS24075 () | 4767244..4768833 | - | 1590 | WP_001009620.1 | SIR2 family protein | - |
| CPY99_RS24080 () | 4769224..4769454 | - | 231 | WP_072141629.1 | integrase | - |
| CPY99_RS24085 () | 4769686..4770054 | + | 369 | WP_001275820.1 | hypothetical protein | - |
| CPY99_RS24090 () | 4770271..4771017 | + | 747 | WP_000755106.1 | porin family protein | - |
| CPY99_RS24095 () | 4771202..4771705 | + | 504 | Protein_4435 | DUF1705 domain-containing protein | - |
| CPY99_RS24100 () | 4771768..4772514 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| CPY99_RS24105 () | 4772529..4774070 | - | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| CPY99_RS24110 () | 4774264..4775301 | + | 1038 | Protein_4438 | IS66 family transposase ISEc8 | Transposase |
| CPY99_RS24115 () | 4775396..4775584 | - | 189 | WP_000654305.1 | FaeA/PapI family transcriptional regulator | - |
| CPY99_RS24120 () | 4776127..4776471 | + | 345 | WP_001323645.1 | Major pilu subunit operon regulatory protein PapB | VF |
| CPY99_RS24125 () | 4776549..4777316 | + | 768 | WP_000702043.1 | Chaperone protein caf1M | VF |
| CPY99_RS24130 () | 4777485..4780073 | + | 2589 | WP_000554932.1 | F1 capsule-anchoring protein | VF |
| CPY99_RS24135 () | 4780089..4780508 | + | 420 | WP_000723766.1 | Protein AfaD | VF |
| CPY99_RS24140 () | 4781043..4781555 | + | 513 | WP_096427334.1 | hypothetical protein | VF |
| CPY99_RS24145 () | 4781853..4783115 | - | 1263 | WP_001218806.1 | Prophage integrase IntS ; Integrase | Integrase |
| CPY99_RS24155 () | 4783495..4784070 | - | 576 | WP_061092755.1 | transcriptional regulator | - |
| CPY99_RS24160 () | 4784107..4785804 | - | 1698 | WP_061092754.1 | protein-disulfide reductase DsbD | - |
| CPY99_RS24165 () | 4785780..4786118 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| CPY99_RS24170 () | 4786234..4787535 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|