MGE detailed information
MGE type: Genomic_island MGE length: 77392 bp
Accession: NZ_AP017617 Location: 4779025..4856416 Organism: Escherichia coli strain MRY15-117 Replicon: chromosome
Accession: NZ_AP017617 Location: 4779025..4856416 Organism: Escherichia coli strain MRY15-117 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ03_RS24040 () | 4775430..4776149 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| CPZ03_RS24045 () | 4776146..4777777 | - | 1632 | WP_061092758.1 | sensor histidine kinase | - |
| CPZ03_RS24050 () | 4777958..4778188 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| CPZ03_RS24055 () | 4778200..4778472 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CPZ03_RS24060 () | 4778701..4778997 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| CPZ03_RS24065 () | 4779025..4779198 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| CPZ03_RS24070 () | 4779317..4780834 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| CPZ03_RS24075 () | 4781071..4782528 | - | 1458 | WP_061092757.1 | dipeptide/tripeptide permease DtpC | - |
| CPZ03_RS24080 () | 4782587..4784734 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| CPZ03_RS24085 () | 4784814..4786148 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CPZ03_RS24095 () | 4786514..4788052 | - | 1539 | WP_061092756.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CPZ03_RS24105 () | 4788935..4789261 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CPZ03_RS24110 () | 4789258..4789521 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| CPZ03_RS24115 () | 4789593..4790459 | - | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| CPZ03_RS24120 () | 4790544..4790741 | - | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| CPZ03_RS24125 () | 4790753..4791244 | - | 492 | WP_096427331.1 | hypothetical protein | - |
| CPZ03_RS24130 () | 4791241..4791618 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| CPZ03_RS24135 () | 4791665..4792039 | - | 375 | WP_032153712.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| CPZ03_RS24140 () | 4792119..4792340 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| CPZ03_RS24145 () | 4792409..4792885 | - | 477 | WP_001186715.1 | RadC family protein | - |
| CPZ03_RS24155 () | 4792901..4793386 | - | 486 | WP_032153711.1 | antirestriction protein | - |
| CPZ03_RS24160 () | 4793478..4794296 | - | 819 | WP_001234693.1 | DUF945 domain-containing protein | - |
| CPZ03_RS24165 () | 4794387..4794596 | - | 210 | WP_023155727.1 | DUF905 family protein | - |
| CPZ03_RS24170 () | 4794626..4795303 | - | 678 | WP_023155728.1 | hypothetical protein | - |
| CPZ03_RS24175 () | 4795422..4796306 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| CPZ03_RS24180 () | 4796413..4797345 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| CPZ03_RS24185 () | 4797342..4798151 | - | 810 | WP_032153709.1 | hypothetical protein | - |
| CPZ03_RS24200 () | 4799902..4800633 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| CPZ03_RS24205 () | 4800727..4801384 | - | 658 | Protein_4462 | transposase | - |
| CPZ03_RS24210 () | 4801818..4803422 | + | 1605 | WP_001067608.1 | DUF3987 domain-containing protein | - |
| CPZ03_RS24215 () | 4805019..4805585 | + | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| CPZ03_RS27650 () | 4805705..4805854 | - | 150 | WP_001421645.1 | hypothetical protein | - |
| CPZ03_RS27485 () | 4805869..4806441 | + | 573 | WP_032153703.1 | hypothetical protein | - |
| CPZ03_RS24225 () | 4806510..4806746 | + | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| CPZ03_RS24230 () | 4807015..4807563 | + | 549 | WP_032153702.1 | hypothetical protein | - |
| CPZ03_RS24235 () | 4807582..4807830 | - | 249 | WP_001349534.1 | osmoprotectant transport activator ProQ | - |
| CPZ03_RS24240 () | 4807899..4808090 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| CPZ03_RS24250 () | 4808493..4809184 | - | 692 | Protein_4471 | IS1 family transposase | - |
| CPZ03_RS24255 () | 4809244..4809420 | + | 177 | Protein_4472 | transketolase family protein | - |
| CPZ03_RS24260 () | 4809683..4809796 | + | 114 | WP_131501864.1 | transposase | - |
| CPZ03_RS24270 () | 4810647..4811213 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| CPZ03_RS24280 () | 4811454..4812269 | + | 816 | WP_001043260.1 | hypothetical protein | ARG |
| CPZ03_RS24285 () | 4812330..4813133 | + | 804 | WP_001082319.1 | hypothetical protein | ARG |
| CPZ03_RS24290 () | 4813133..4813969 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| CPZ03_RS24300 () | 4814275..4814517 | + | 243 | WP_000844627.1 | transposase | - |
| CPZ03_RS24305 () | 4814549..4815199 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CPZ03_RS24310 () | 4815305..4816504 | + | 1200 | WP_032153701.1 | Multidrug resistance protein MdtG | ARG |
| CPZ03_RS24315 () | 4816471..4816659 | - | 189 | Protein_4481 | IS91 family transposase | - |
| CPZ03_RS24320 () | 4816771..4817076 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| CPZ03_RS24325 () | 4817104..4818318 | - | 1215 | WP_023300759.1 | Multidrug resistance protein MdtL | ARG |
| CPZ03_RS27740 () | 4818535..4818981 | - | 447 | Protein_4484 | DUF3363 domain-containing protein | - |
| CPZ03_RS24335 () | 4819450..4820106 | - | 657 | Protein_4485 | IS91-like element ISVsa3 family transposase | - |
| CPZ03_RS24340 () | 4820040..4820318 | - | 279 | WP_001349530.1 | hypothetical protein | VF |
| CPZ03_RS24355 () | 4820741..4821055 | + | 315 | WP_000930062.1 | hypothetical protein | VF |
| CPZ03_RS24360 () | 4821262..4821525 | + | 264 | Protein_4488 | hypothetical protein | VF |
| CPZ03_RS24370 () | 4821976..4823208 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| CPZ03_RS24375 () | 4823359..4824520 | - | 1162 | Protein_4490 | IS3 family transposase IS3 | Transposase |
| CPZ03_RS24380 () | 4824688..4825668 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| CPZ03_RS24385 () | 4825665..4826609 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| CPZ03_RS24390 () | 4826612..4827694 | - | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| CPZ03_RS24400 () | 4828161..4828427 | + | 267 | WP_032153698.1 | MazG-like family protein | - |
| CPZ03_RS24405 () | 4828727..4829241 | - | 515 | Protein_4495 | ISL3 family transposase ISEc38 | Transposase |
| CPZ03_RS24410 () | 4829849..4833262 | + | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| CPZ03_RS24415 () | 4833326..4834960 | + | 1635 | WP_000627728.1 | type I restriction-modification system subunit M | - |
| CPZ03_RS24420 () | 4834957..4836099 | + | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| CPZ03_RS24425 () | 4836108..4837730 | + | 1623 | WP_000778955.1 | AAA family ATPase | - |
| CPZ03_RS24430 () | 4837730..4838626 | + | 897 | WP_000499115.1 | hypothetical protein | - |
| CPZ03_RS24435 () | 4838849..4839078 | - | 230 | Protein_4501 | integrase | - |
| CPZ03_RS24440 () | 4839257..4839994 | + | 738 | WP_001398114.1 | porin family protein | - |
| CPZ03_RS24445 () | 4840414..4841310 | + | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| CPZ03_RS24450 () | 4841359..4842438 | + | 1080 | WP_001207396.1 | hypothetical protein | - |
| CPZ03_RS24455 () | 4842485..4844056 | + | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| CPZ03_RS24460 () | 4844053..4844319 | + | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| CPZ03_RS24465 () | 4844459..4844656 | + | 198 | WP_001238004.1 | hypothetical protein | - |
| CPZ03_RS24475 () | 4844709..4846382 | + | 1674 | WP_025492097.1 | phosphoethanolamine transferase | - |
| CPZ03_RS24480 () | 4846526..4847560 | - | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| CPZ03_RS24490 () | 4847610..4847971 | + | 362 | Protein_4510 | IS1 family transposase IS1A | Transposase |
| CPZ03_RS27655 () | 4847960..4848247 | + | 288 | Protein_4511 | integrase core domain-containing protein | - |
| CPZ03_RS24500 () | 4848825..4850219 | - | 1395 | WP_001037798.1 | carbohydrate porin | - |
| CPZ03_RS24505 () | 4850414..4851847 | - | 1434 | WP_024144973.1 | glycoside hydrolase family 32 protein | - |
| CPZ03_RS24510 () | 4851844..4853121 | - | 1278 | WP_001083368.1 | MFS transporter | - |
| CPZ03_RS24515 () | 4853184..4855310 | - | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| CPZ03_RS24520 () | 4855406..4856416 | - | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| CPZ03_RS24525 () | 4856566..4857750 | - | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| CPZ03_RS24535 () | 4858109..4858684 | - | 576 | WP_061092755.1 | transcriptional regulator | - |
| CPZ03_RS24540 () | 4858721..4860418 | - | 1698 | WP_061092754.1 | protein-disulfide reductase DsbD | - |
| CPZ03_RS24545 () | 4860394..4860732 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|