MGE detailed information
MGE type: Prophage MGE length: 45913 bp
Accession: NZ_AM412059 Location: 1025976..1071888 Organism: Mycobacterium tuberculosis variant bovis BCG str. Moreau RDJ isolate SL21 FAP RJ Passage B8S2 vaccine culture Replicon: chromosome
Accession: NZ_AM412059 Location: 1025976..1071888 Organism: Mycobacterium tuberculosis variant bovis BCG str. Moreau RDJ isolate SL21 FAP RJ Passage B8S2 vaccine culture Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H056_RS04825 () | 1022169..1023440 | - | 1272 | WP_003404747.1 | PPE family protein | - |
| H056_RS04830 () | 1023455..1023754 | - | 300 | WP_003404748.1 | PE family protein | - |
| H056_RS04835 () | 1024198..1025979 | + | 1782 | WP_003404749.1 | BCCT family transporter | - |
| H056_RS04840 () | 1025976..1026233 | + | 258 | WP_003404750.1 | hypothetical protein | - |
| H056_RS04845 () | 1026322..1026798 | + | 477 | WP_003404754.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| H056_RS04850 () | 1026795..1027295 | + | 501 | WP_003404756.1 | GNAT family N-acetyltransferase | Toxin Detail |
| H056_RS04860 () | 1027608..1028927 | - | 1320 | WP_010950468.1 | IS256-like element IS1554 family transposase | - |
| H056_RS04865 () | 1029215..1029796 | + | 582 | WP_003404760.1 | IS607-like element IS1535 family transposase | - |
| H056_RS04870 () | 1029796..1031448 | + | 1653 | WP_003404761.1 | IS607 family element transposase accessory protein TnpB | - |
| H056_RS04875 () | 1031624..1032688 | - | 1065 | WP_003898648.1 | poly-gamma-glutamate hydrolase family protein | - |
| H056_RS04880 () | 1032689..1033975 | - | 1287 | WP_011799140.1 | Nramp family divalent metal transporter | - |
| H056_RS04885 () | 1034007..1034744 | - | 738 | WP_003404764.1 | flavodoxin family protein | - |
| H056_RS04890 () | 1034821..1035897 | - | 1077 | WP_003404767.1 | hypothetical protein | - |
| H056_RS04895 () | 1035951..1036742 | - | 792 | WP_003404769.1 | SDR family oxidoreductase | - |
| H056_RS04900 () | 1037014..1038126 | + | 1113 | WP_003404775.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| H056_RS04905 () | 1038139..1039113 | + | 975 | WP_003404779.1 | phosphate ABC transporter permease subunit PstC | - |
| H056_RS04910 () | 1039110..1040024 | + | 915 | WP_003898651.1 | phosphate ABC transporter permease PstA | - |
| H056_RS21910 () | 1040031..1042026 | - | 1996 | Protein_963 | serine/threonine protein kinase PknD | - |
| H056_RS04920 () | 1042048..1043160 | - | 1113 | WP_003404784.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| H056_RS04930 () | 1043376..1044207 | + | 832 | Protein_965 | phosphate ABC transporter ATP-binding protein | - |
| H056_RS04935 () | 1044228..1045352 | + | 1125 | WP_003404786.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| H056_RS04940 () | 1045412..1046428 | + | 1017 | WP_003404792.1 | phosphate ABC transporter permease subunit PstC | - |
| H056_RS04945 () | 1046430..1047335 | + | 906 | WP_003404794.1 | phosphate ABC transporter permease PstA | - |
| H056_RS04950 () | 1047312..1048133 | - | 822 | WP_003404795.1 | Ku protein | - |
| H056_RS04955 () | 1048249..1050528 | + | 2280 | WP_003898655.1 | ATP-dependent DNA ligase | - |
| H056_RS04960 () | 1050525..1052459 | + | 1935 | WP_003404801.1 | fumarylacetoacetate hydrolase family protein | - |
| H056_RS04965 () | 1052706..1053572 | - | 867 | WP_003404819.1 | TIGR03619 family F420-dependent LLM class oxidoreductase | - |
| H056_RS04970 () | 1053657..1054430 | - | 774 | WP_003404823.1 | STAS domain-containing protein | - |
| H056_RS04975 () | 1054473..1054751 | + | 279 | WP_003901948.1 | hypothetical protein | - |
| H056_RS04980 () | 1054809..1055849 | - | 1041 | WP_003898656.1 | DUF4873 domain-containing protein | - |
| H056_RS04985 () | 1055878..1056354 | + | 477 | WP_003404828.1 | Fpg/Nei family DNA glycosylase | - |
| H056_RS04990 () | 1056372..1057121 | + | 750 | WP_003918158.1 | SDR family oxidoreductase | - |
| H056_RS04995 () | 1057137..1058798 | - | 1662 | WP_003404830.1 | glucose-6-phosphate isomerase | - |
| H056_RS20505 () | 1059560..1059754 | + | 195 | WP_003404835.1 | hypothetical protein | - |
| H056_RS05005 () | 1059759..1060076 | - | 318 | WP_003404838.1 | chorismate mutase | - |
| H056_RS05010 () | 1060373..1062688 | + | 2316 | WP_003404859.1 | DNA helicase PcrA | - |
| H056_RS05015 () | 1062769..1063767 | - | 999 | WP_003404862.1 | M23 family metallopeptidase | - |
| H056_RS05020 () | 1064077..1065240 | + | 1164 | WP_003404866.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| H056_RS05025 () | 1065262..1066164 | + | 903 | WP_003404870.1 | succinate--CoA ligase subunit alpha | - |
| H056_RS05030 () | 1066226..1067074 | - | 849 | WP_011799141.1 | LLM class F420-dependent oxidoreductase | - |
| H056_RS05035 () | 1067239..1068150 | + | 912 | WP_003404875.1 | DUF5336 domain-containing protein | - |
| H056_RS05040 () | 1068190..1069557 | + | 1368 | WP_003901049.1 | hypothetical protein | - |
| H056_RS05045 () | 1069673..1070320 | + | 648 | WP_003898661.1 | phosphoribosylglycinamide formyltransferase | - |
| H056_RS05050 () | 1070317..1071888 | + | 1572 | WP_003404890.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| H056_RS05055 () | 1071995..1073374 | + | 1380 | WP_003404892.1 | sigma 54-interacting transcriptional regulator | - |
| H056_RS05060 () | 1073367..1075385 | + | 2019 | WP_003404895.1 | VWA domain-containing protein | - |
| H056_RS05065 () | 1075439..1075660 | + | 222 | WP_003404898.1 | antitoxin VapB9 | - |
| H056_RS05070 () | 1075657..1076040 | + | 384 | WP_003404903.1 | PIN domain-containing protein | - |
| H056_RS05075 () | 1076186..1076533 | + | 348 | WP_003404907.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|