MGE detailed information
MGE type: Prophage MGE length: 29141 bp
Accession: NC_022886 Location: 350485..379625 Organism: Helicobacter pylori BM012A Replicon: chromosome
Accession: NC_022886 Location: 350485..379625 Organism: Helicobacter pylori BM012A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U063_RS01835 () | 345573..348116 | + | 2544 | WP_023591726.1 | alanine--tRNA ligase | - |
| U063_RS01840 () | 348118..348681 | + | 564 | WP_023591727.1 | septum formation inhibitor Maf | - |
| U063_RS08755 () | 348805..349061 | + | 257 | Protein_342 | hypothetical protein | - |
| U063_RS01850 () | 349139..350143 | - | 1005 | WP_000534786.1 | formamidase | - |
| U063_RS08630 () | 350485..350685 | + | 201 | Protein_344 | DNA cytosine methyltransferase | - |
| U063_RS01860 () | 350764..351462 | - | 699 | Protein_345 | prephenate dehydrogenase | - |
| U063_RS08635 () | 351446..351619 | - | 174 | WP_023591729.1 | site-specific DNA-methyltransferase | - |
| U063_RS01865 () | 351616..352296 | - | 681 | Protein_347 | DNA cytosine methyltransferase | - |
| U063_RS08640 () | 352449..353177 | - | 729 | Protein_348 | site-specific DNA-methyltransferase | - |
| U063_RS01875 () | 353230..354489 | - | 1260 | WP_023591540.1 | IS607 family transposase IS607 | Transposase |
| U063_RS01880 () | 354464..355117 | - | 654 | WP_023591539.1 | IS607 family transposase IS607 | Transposase |
| U063_RS01885 () | 355198..355911 | - | 714 | Protein_351 | competence protein | - |
| U063_RS01890 () | 355954..356424 | - | 471 | Protein_352 | hypothetical protein | - |
| U063_RS01895 () | 356517..357224 | + | 708 | WP_023591733.1 | hypothetical protein | - |
| U063_RS01900 () | 357229..357600 | + | 372 | WP_038419701.1 | hypothetical protein | - |
| U063_RS08320 () | 357697..359079 | + | 1383 | Protein_355 | Protein VirD4 | VF |
| U063_RS01910 () | 359344..359625 | - | 282 | WP_000921941.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| U063_RS01915 () | 359618..359932 | - | 315 | WP_023591735.1 | hypothetical protein | Antitoxin Detail |
| U063_RS01920 () | 360270..362180 | + | 1911 | WP_038420352.1 | relaxase/mobilization nuclease domain-containing protein | - |
| U063_RS01925 () | 362205..363389 | - | 1185 | WP_023591737.1 | hypothetical protein | - |
| U063_RS01930 () | 363433..363717 | - | 285 | WP_000394639.1 | hypothetical protein ; Integrase | Integrase |
| U063_RS01935 () | 363798..364454 | - | 657 | WP_023591738.1 | ParA family protein | - |
| U063_RS01940 () | 364721..373147 | - | 8427 | WP_023591739.1 | DEAD/DEAH box helicase family protein | - |
| U063_RS01945 () | 373302..374021 | + | 720 | Protein_363 | hypothetical protein | - |
| U063_RS01950 () | 374068..375327 | - | 1260 | WP_023591540.1 | IS607 family transposase IS607 | Transposase |
| U063_RS01955 () | 375302..375955 | - | 654 | WP_023591539.1 | IS607 family transposase IS607 | Transposase |
| U063_RS01965 () | 376375..377037 | + | 663 | WP_023591742.1 | hypothetical protein ; Integrase | Integrase |
| U063_RS01970 () | 377440..377649 | + | 210 | Protein_367 | hypothetical protein | - |
| U063_RS01975 () | 377738..378391 | + | 654 | WP_023591539.1 | IS607 family transposase IS607 | Transposase |
| U063_RS01980 () | 378366..379625 | + | 1260 | WP_023591540.1 | IS607 family transposase IS607 | Transposase |
| U063_RS01985 () | 379658..379918 | - | 261 | WP_023591744.1 | hypothetical protein | - |
| U063_RS08720 () | 379905..380138 | - | 234 | WP_038419705.1 | hypothetical protein | - |
| U063_RS08325 () | 380140..380368 | - | 229 | Protein_372 | restriction endonuclease | - |
| U063_RS01995 () | 380637..380780 | - | 144 | WP_000898400.1 | DNA cytosine methyltransferase | - |
| U063_RS02000 () | 380821..382311 | - | 1491 | WP_023591745.1 | sodium/proline symporter PutP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|