MGE detailed information
MGE type: Genomic_island MGE length: 21123 bp
Accession: NC_022364 Location: 3957121..3978243 Organism: Escherichia coli LY180 Replicon: chromosome
Accession: NC_022364 Location: 3957121..3978243 Organism: Escherichia coli LY180 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LY180_RS19530 () | 3952861..3955179 | - | 2319 | WP_000702948.1 | alpha-xylosidase | - |
| LY180_RS19535 () | 3955189..3956571 | - | 1383 | WP_000834439.1 | glycoside-pentoside-hexuronide family transporter | - |
| LY180_RS19545 () | 3957121..3958344 | + | 1224 | WP_000779480.1 | Prophage integrase IntS ; Integrase | Integrase |
| LY180_RS19550 () | 3958440..3960065 | - | 1626 | WP_000021860.1 | ATP-dependent helicase | - |
| LY180_RS19555 () | 3960067..3961767 | - | 1701 | WP_000406299.1 | AAA family ATPase | - |
| LY180_RS19560 () | 3962175..3962609 | - | 435 | WP_001350040.1 | hypothetical protein | - |
| LY180_RS19565 () | 3963303..3963803 | - | 501 | Protein_3739 | inovirus-type Gp2 protein | - |
| LY180_RS19570 () | 3963910..3965118 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| LY180_RS19575 () | 3965133..3965672 | - | 540 | Protein_3741 | hypothetical protein | - |
| LY180_RS19580 () | 3966008..3966211 | - | 204 | WP_000103689.1 | AlpA family phage regulatory protein | - |
| LY180_RS19585 () | 3966592..3967740 | + | 1149 | WP_000264726.1 | hypothetical protein | - |
| LY180_RS19590 () | 3968143..3968433 | + | 291 | Protein_3744 | hypothetical protein | - |
| LY180_RS19605 () | 3969858..3970661 | + | 804 | WP_001245321.1 | hypothetical protein | - |
| LY180_RS19610 () | 3970878..3971354 | + | 477 | WP_001254693.1 | hypothetical protein | - |
| LY180_RS19615 () | 3971426..3972247 | + | 822 | WP_000197395.1 | DUF945 domain-containing protein | - |
| LY180_RS19620 () | 3972317..3972787 | + | 471 | WP_000104319.1 | DNA repair protein RadC | - |
| LY180_RS19625 () | 3972796..3973017 | + | 222 | WP_000691985.1 | DUF987 family protein | - |
| LY180_RS19630 () | 3973049..3973414 | + | 366 | WP_001192122.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LY180_RS19635 () | 3973448..3973768 | + | 321 | WP_001095907.1 | TA system toxin CbtA family protein | Toxin Detail |
| LY180_RS19645 () | 3974535..3975719 | + | 1185 | WP_001172876.1 | sugar efflux transporter | - |
| LY180_RS19650 () | 3975830..3976753 | + | 924 | WP_000535960.1 | carboxylate/amino acid/amine transporter | - |
| LY180_RS19655 () | 3976757..3977020 | - | 264 | Protein_3755 | Lipoprotein 28 | VF |
| LY180_RS19660 () | 3977035..3978243 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| LY180_RS19665 () | 3978350..3978913 | - | 564 | Protein_3757 | MetQ/NlpA family lipoprotein | - |
| LY180_RS19675 () | 3979135..3979428 | + | 294 | WP_000805509.1 | hypothetical protein | - |
| LY180_RS19680 () | 3979469..3980659 | - | 1191 | WP_001288549.1 | purine ribonucleoside efflux pump NepI | - |
| LY180_RS19685 () | 3980870..3981322 | - | 453 | WP_001300927.1 | DUF1198 domain-containing protein | - |
| LY180_RS19690 () | 3981375..3982709 | - | 1335 | WP_001349999.1 | adenine permease AdeQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|