MGE detailed information
MGE type: Genomic_island MGE length: 9948 bp
Accession: NC_022364 Location: 3394395..3404342 Organism: Escherichia coli LY180 Replicon: chromosome
Accession: NC_022364 Location: 3394395..3404342 Organism: Escherichia coli LY180 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LY180_RS16720 () | 3390227..3391558 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| LY180_RS16725 () | 3391580..3392569 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| LY180_RS16730 () | 3392668..3393606 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| LY180_RS26800 () | 3393921..3394139 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| LY180_RS16740 () | 3394395..3394934 | + | 540 | WP_000675753.1 | hypothetical protein | - |
| LY180_RS16745 () | 3394956..3396143 | + | 1188 | WP_000484577.1 | YhaC family protein | - |
| LY180_RS16750 () | 3397166..3398311 | - | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| LY180_RS16755 () | 3398408..3399298 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| LY180_RS16760 () | 3399328..3400098 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| LY180_RS16765 () | 3400114..3401448 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| LY180_RS16775 () | 3401823..3403394 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| LY180_RS16780 () | 3403543..3403878 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| LY180_RS16785 () | 3403878..3404342 | + | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| LY180_RS16790 () | 3404397..3405206 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| LY180_RS16795 () | 3405455..3406735 | + | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| LY180_RS16800 () | 3406758..3407231 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| LY180_RS16805 () | 3407242..3408021 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| LY180_RS16810 () | 3408011..3408889 | + | 879 | WP_001298758.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| LY180_RS16815 () | 3408907..3409341 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|