MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 64118 bp
Accession: NC_020797 Location: 1..64118 Organism: Xanthomonas axonopodis Xac29-1 Replicon: plasmid pXAC64
Accession: NC_020797 Location: 1..64118 Organism: Xanthomonas axonopodis Xac29-1 Replicon: plasmid pXAC64
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XAC29_RS44810 () | 3..185 | + | 183 | Protein_0 | helix-turn-helix domain-containing protein | - |
| XAC29_RS47600 () | 316..732 | - | 417 | WP_087962480.1 | transposase | - |
| XAC29_RS48225 () | 786..992 | - | 207 | WP_011052961.1 | hypothetical protein | - |
| XAC29_RS44820 () | 1042..1371 | - | 330 | WP_005918642.1 | hypothetical protein | - |
| XAC29_RS44825 () | 1518..2117 | + | 600 | WP_015462601.1 | hypothetical protein | - |
| XAC29_RS44830 () | 2444..2893 | + | 450 | WP_015462602.1 | hypothetical protein | - |
| XAC29_RS44835 () | 2890..3495 | + | 606 | WP_011052963.1 | M48 family metalloprotease | - |
| XAC29_RS44840 () | 3492..4034 | + | 543 | WP_011052965.1 | hypothetical protein | - |
| XAC29_RS47605 () | 4114..4458 | - | 345 | WP_075150220.1 | hypothetical protein | - |
| XAC29_RS44845 () | 4501..5778 | - | 1278 | WP_011052966.1 | lytic murein transglycosylase | - |
| XAC29_RS44850 () | 5911..8901 | - | 2991 | WP_011052967.1 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| XAC29_RS44855 () | 8909..10183 | - | 1275 | WP_011052968.1 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| XAC29_RS44860 () | 10375..11430 | + | 1056 | WP_015462603.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| XAC29_RS44865 () | 11563..12630 | + | 1068 | WP_041471075.1 | hypothetical protein | - |
| XAC29_RS47620 () | 13996..17589 | + | 3594 | WP_080629825.1 | TAL effector repeat-containing protein | - |
| XAC29_RS44875 () | 17955..19175 | - | 1221 | WP_011052942.1 | replication initiation protein | - |
| XAC29_RS44880 () | 19423..19737 | - | 315 | WP_005918227.1 | hypothetical protein | - |
| XAC29_RS44885 () | 19882..20205 | - | 324 | WP_005918229.1 | hypothetical protein | - |
| XAC29_RS44890 () | 20202..20828 | - | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| XAC29_RS44895 () | 21284..21592 | + | 309 | WP_015462607.1 | hypothetical protein | - |
| XAC29_RS47625 () | 21589..21798 | + | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| XAC29_RS44905 () | 22193..22546 | - | 354 | WP_015462609.1 | hypothetical protein | - |
| XAC29_RS44910 () | 22595..23302 | - | 708 | WP_015462610.1 | hypothetical protein | - |
| XAC29_RS44915 () | 23299..23745 | - | 447 | WP_011052937.1 | hypothetical protein | - |
| XAC29_RS44920 () | 24093..24488 | + | 396 | WP_015462611.1 | hypothetical protein | - |
| XAC29_RS48605 () | 24488..24661 | + | 174 | WP_011052974.1 | hypothetical protein | - |
| XAC29_RS47630 () | 24803..25075 | - | 273 | WP_005934628.1 | hypothetical protein | - |
| XAC29_RS44925 () | 25366..25716 | + | 351 | WP_015462612.1 | hypothetical protein | - |
| XAC29_RS48760 () | 25915..26256 | + | 342 | WP_031425612.1 | hypothetical protein | - |
| XAC29_RS44935 () | 26515..28089 | + | 1575 | WP_011052977.1 | type IV secretion system DNA-binding domain-containing protein | - |
| XAC29_RS44940 () | 28103..31078 | + | 2976 | WP_011052978.1 | Multifunctional conjugation protein TraI | Relaxase |
| XAC29_RS44945 () | 31132..31458 | - | 327 | WP_015462614.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| XAC29_RS44950 () | 31455..31673 | - | 219 | WP_003491150.1 | antitoxin MazE family protein | Antitoxin Detail |
| XAC29_RS44955 () | 31810..32196 | - | 387 | WP_003491149.1 | hypothetical protein | - |
| XAC29_RS44960 () | 32273..32692 | - | 420 | WP_011052981.1 | hypothetical protein | - |
| XAC29_RS44965 () | 32818..33696 | - | 879 | WP_011052982.1 | Type IV secretion system protein virB1 | VF |
| XAC29_RS44970 () | 33707..34729 | - | 1023 | WP_011052983.1 | Type IV secretion system protein VirB11 | VF |
| XAC29_RS44975 () | 34740..35960 | - | 1221 | WP_011052984.1 | Type IV secretion system protein virB10 | VF |
| XAC29_RS44980 () | 35962..36744 | - | 783 | WP_011052985.1 | Type IV secretion system protein virB9 | VF |
| XAC29_RS44985 () | 36769..37443 | - | 675 | WP_011052986.1 | type IV secretion system protein | - |
| XAC29_RS44990 () | 37440..38306 | - | 867 | WP_011052987.1 | type IV secretion system protein | - |
| XAC29_RS44995 () | 38308..38688 | - | 381 | WP_015462616.1 | hypothetical protein | - |
| XAC29_RS45000 () | 38681..38893 | - | 213 | WP_015462617.1 | hypothetical protein | - |
| XAC29_RS45005 () | 38941..39609 | - | 669 | WP_015462618.1 | VirB5 protein | - |
| XAC29_RS45010 () | 39606..42239 | - | 2634 | WP_011052991.1 | Type IV secretion system protein virB4 | VF |
| XAC29_RS45015 () | 42262..42561 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| XAC29_RS45020 () | 42558..42935 | - | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| XAC29_RS45025 () | 42956..43216 | - | 261 | WP_041471079.1 | hypothetical protein | - |
| XAC29_RS45030 () | 43225..44311 | - | 1087 | Protein_48 | IS3 family transposase ISXac2 | Transposase |
| XAC29_RS45040 () | 44426..44662 | - | 237 | WP_015462622.1 | Wgr family protein | - |
| XAC29_RS45045 () | 44666..44995 | - | 330 | WP_011052996.1 | partition gene repressor | - |
| XAC29_RS45050 () | 45047..46078 | - | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| XAC29_RS45055 () | 46092..46859 | - | 768 | WP_011052998.1 | ParA family protein | - |
| XAC29_RS45060 () | 47664..48890 | - | 1227 | WP_015472949.1 | plasmid replication initiator protein | - |
| XAC29_RS45065 () | 49170..50357 | - | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| XAC29_RS45070 () | 50364..50627 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| XAC29_RS45075 () | 50652..51053 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XAC29_RS45080 () | 51050..51310 | - | 261 | WP_011053003.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| XAC29_RS47650 () | 51501..52073 | + | 573 | WP_011053004.1 | Tn3 family transposase ISPsy42 | Transposase |
| XAC29_RS45090 () | 52087..52638 | - | 552 | Protein_59 | IS3 family transposase ISXac3 | Transposase |
| XAC29_RS45095 () | 54192..58295 | + | 4104 | WP_041471072.1 | TAL effector repeat-containing protein | - |
| XAC29_RS47670 () | 58394..58540 | - | 147 | Protein_61 | transposase | - |
| XAC29_RS45100 () | 58585..59283 | - | 699 | WP_015462628.1 | UPF0149 family protein | - |
| XAC29_RS45105 () | 59302..62277 | - | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| XAC29_RS45110 () | 62282..62701 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| XAC29_RS45115 () | 62701..62940 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| XAC29_RS45120 () | 63154..64077 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|