MGE detailed information
MGE type: Genomic_island MGE length: 11562 bp
Accession: NC_020163 Location: 4032462..4044023 Organism: Escherichia coli APEC O78 Replicon: chromosome
Accession: NC_020163 Location: 4032462..4044023 Organism: Escherichia coli APEC O78 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APECO78_RS20200 () | 4028787..4029995 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| APECO78_RS20205 () | 4030021..4031352 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| APECO78_RS20210 () | 4031374..4032363 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| APECO78_RS20215 () | 4032462..4033400 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| APECO78_RS27115 () | 4033715..4033933 | + | 219 | WP_212578356.1 | transcriptional activator TdcR | - |
| APECO78_RS20225 () | 4034189..4034728 | + | 540 | WP_000675746.1 | hypothetical protein | - |
| APECO78_RS20230 () | 4034750..4035937 | + | 1188 | WP_000484577.1 | YhaC family protein | - |
| APECO78_RS20235 () | 4036847..4037992 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| APECO78_RS20240 () | 4038089..4038979 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| APECO78_RS20245 () | 4039009..4039779 | - | 771 | WP_001058214.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| APECO78_RS20250 () | 4039795..4041129 | - | 1335 | WP_000599652.1 | galactarate/glucarate/glycerate transporter GarP | - |
| APECO78_RS20255 () | 4041504..4043075 | + | 1572 | WP_001273761.1 | galactarate dehydratase | - |
| APECO78_RS20260 () | 4043224..4043559 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| APECO78_RS20265 () | 4043559..4044023 | + | 465 | WP_000347251.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| APECO78_RS20270 () | 4044078..4044887 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| APECO78_RS20275 () | 4045136..4046416 | + | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| APECO78_RS20280 () | 4046439..4046912 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| APECO78_RS20285 () | 4046923..4047702 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| APECO78_RS20290 () | 4047692..4048570 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| APECO78_RS20295 () | 4048588..4049022 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|