MGE detailed information
MGE type: Prophage MGE length: 91981 bp
Accession: NC_019842 Location: 1258184..1350164 Organism: Bacillus amyloliquefaciens subsp. plantarum AS43.3 Replicon: chromosome
Accession: NC_019842 Location: 1258184..1350164 Organism: Bacillus amyloliquefaciens subsp. plantarum AS43.3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B938_RS06525 () | 1254140..1255138 | + | 999 | WP_007407297.1 | LacI family transcriptional regulator | - |
| B938_RS06530 () | 1255214..1256660 | + | 1447 | Protein_1230 | tagaturonate reductase | - |
| B938_RS06535 () | 1256657..1258150 | + | 1494 | WP_015239669.1 | altronate dehydratase family protein | - |
| B938_RS06540 () | 1258184..1258948 | - | 765 | WP_007610763.1 | sulfite exporter TauE/SafE family protein | - |
| B938_RS06545 () | 1259097..1259564 | - | 468 | WP_015239670.1 | DinB family protein | - |
| B938_RS06550 () | 1259770..1260906 | + | 1137 | WP_087920760.1 | tetratricopeptide repeat protein | - |
| B938_RS19975 () | 1260896..1261030 | + | 135 | WP_003154881.1 | PhrA family phosphatase inhibitor | - |
| B938_RS06560 () | 1261173..1262126 | + | 954 | WP_003154880.1 | N-acetylmuramoyl-L-alanine amidase CwlA | VF |
| B938_RS06565 () | 1262164..1262541 | - | 378 | WP_007610770.1 | PH domain-containing protein | - |
| B938_RS06570 () | 1262653..1263258 | + | 606 | WP_015239671.1 | poly-gamma-glutamate hydrolase family protein | - |
| B938_RS06575 () | 1263397..1263987 | - | 591 | WP_007610775.1 | ImmA/IrrE family metallo-endopeptidase | - |
| B938_RS06580 () | 1264136..1264474 | - | 339 | WP_015239672.1 | helix-turn-helix domain-containing protein | - |
| B938_RS06585 () | 1264665..1264844 | + | 180 | WP_007407285.1 | hypothetical protein | - |
| B938_RS06590 () | 1264834..1265661 | + | 828 | WP_015239673.1 | hypothetical protein | - |
| B938_RS06595 () | 1265561..1266361 | + | 801 | WP_015239674.1 | IS21 family transposase ISPa36 | Transposase |
| B938_RS20225 () | 1266361..1266528 | + | 168 | WP_015239675.1 | hypothetical protein | - |
| B938_RS06600 () | 1266626..1266967 | + | 342 | WP_015239676.1 | hypothetical protein | - |
| B938_RS06605 () | 1266957..1267160 | + | 204 | WP_007407280.1 | XtrA/YqaO family protein | - |
| B938_RS06610 () | 1267274..1267786 | + | 513 | WP_007407279.1 | sigma-70 family RNA polymerase sigma factor | - |
| B938_RS06615 () | 1267899..1268696 | + | 798 | WP_007407278.1 | terminase small subunit | - |
| B938_RS06620 () | 1268693..1269991 | + | 1299 | WP_015239677.1 | PBSX family phage terminase large subunit | - |
| B938_RS06625 () | 1270040..1271431 | + | 1392 | WP_094031916.1 | phage portal protein | - |
| B938_RS06630 () | 1271451..1272296 | + | 846 | WP_015239679.1 | hypothetical protein | - |
| B938_RS06635 () | 1272323..1273258 | + | 936 | WP_007407274.1 | phage major capsid protein | - |
| B938_RS06640 () | 1273275..1273658 | + | 384 | WP_015239680.1 | DUF3199 family protein | - |
| B938_RS06645 () | 1273655..1274011 | + | 357 | WP_007407272.1 | DUF3599 family protein | - |
| B938_RS06650 () | 1274008..1274511 | + | 504 | WP_015239681.1 | HK97 gp10 family phage protein | - |
| B938_RS06655 () | 1274508..1274954 | + | 447 | WP_015239682.1 | hypothetical protein | - |
| B938_RS06660 () | 1274951..1275160 | + | 210 | WP_007610809.1 | hypothetical protein | - |
| B938_RS06665 () | 1275160..1276557 | + | 1398 | WP_015239683.1 | phage tail sheath family protein | - |
| B938_RS06670 () | 1276559..1277002 | + | 444 | WP_003154837.1 | phage tail tube protein | - |
| B938_RS06675 () | 1277079..1277525 | + | 447 | WP_003154836.1 | phage portal protein | - |
| B938_RS19985 () | 1277567..1277719 | + | 153 | WP_015239684.1 | hypothetical protein | - |
| B938_RS06680 () | 1277707..1282833 | + | 5127 | WP_015239685.1 | transglycosylase SLT domain-containing protein | - |
| B938_RS06685 () | 1282826..1283485 | + | 660 | WP_015239686.1 | LysM peptidoglycan-binding domain-containing protein | - |
| B938_RS06690 () | 1283499..1284476 | + | 978 | WP_015239687.1 | hypothetical protein | - |
| B938_RS06695 () | 1284476..1284742 | + | 267 | WP_007610818.1 | DUF2577 family protein | - |
| B938_RS06700 () | 1284846..1285271 | + | 426 | WP_003154825.1 | DUF2634 domain-containing protein | - |
| B938_RS06705 () | 1285264..1286310 | + | 1047 | WP_015239688.1 | baseplate J/gp47 family protein | - |
| B938_RS06710 () | 1286294..1286872 | + | 579 | WP_015239689.1 | YmfQ family protein | - |
| B938_RS06715 () | 1286869..1287141 | + | 273 | WP_015239690.1 | hypothetical protein | - |
| B938_RS06720 () | 1287144..1288733 | + | 1590 | WP_015239691.1 | hypothetical protein | - |
| B938_RS06725 () | 1288740..1289171 | + | 432 | WP_041482010.1 | hypothetical protein | - |
| B938_RS06730 () | 1289176..1289373 | + | 198 | WP_007610833.1 | XkdX family protein | - |
| B938_RS06735 () | 1289430..1290191 | + | 762 | WP_015239693.1 | hypothetical protein | - |
| B938_RS06740 () | 1290243..1290506 | + | 264 | WP_003154815.1 | hemolysin XhlA family protein | - |
| B938_RS06745 () | 1290520..1290783 | + | 264 | WP_003154813.1 | phage holin | - |
| B938_RS06750 () | 1290797..1291675 | + | 879 | WP_007407257.1 | N-acetylmuramoyl-L-alanine amidase XlyA | VF |
| B938_RS06755 () | 1291932..1292102 | - | 171 | WP_003154807.1 | type II toxin-antitoxin system SpoIISB family antitoxin | Antitoxin Detail |
| B938_RS06760 () | 1292103..1292849 | - | 747 | WP_015239694.1 | type II toxin-antitoxin system SpoIISA family toxin | Toxin Detail |
| B938_RS06765 () | 1292957..1293955 | - | 999 | WP_007407255.1 | inorganic phosphate transporter | - |
| B938_RS06770 () | 1293968..1294585 | - | 618 | WP_003154804.1 | DUF47 domain-containing protein | - |
| B938_RS06775 () | 1294872..1296188 | - | 1317 | WP_015239695.1 | amino acid permease | - |
| B938_RS06780 () | 1296511..1297461 | + | 951 | WP_012117369.1 | ring-cleaving dioxygenase | - |
| B938_RS06785 () | 1297644..1299791 | + | 2148 | WP_015239696.1 | glycosyltransferase family 39 protein | - |
| B938_RS06790 () | 1299803..1300774 | + | 972 | WP_015239697.1 | putative glycosyltransferase | VF |
| B938_RS20230 () | 1300863..1301039 | - | 177 | WP_015239698.1 | hypothetical protein | - |
| B938_RS06795 () | 1301137..1302486 | - | 1350 | WP_015239699.1 | Serine protease Do-like HtrA | VF |
| B938_RS06800 () | 1302774..1304333 | + | 1560 | WP_015239700.1 | MFS transporter | - |
| B938_RS06805 () | 1304489..1305313 | + | 825 | WP_015239701.1 | M55 family metallopeptidase | - |
| B938_RS06810 () | 1305328..1306254 | + | 927 | WP_015239702.1 | ABC transporter permease | - |
| B938_RS06815 () | 1306260..1307207 | + | 948 | WP_003154782.1 | ABC transporter permease | - |
| B938_RS06820 () | 1307213..1308241 | + | 1029 | WP_012117374.1 | Oligopeptide transport ATP-binding protein OppD | VF |
| B938_RS06825 () | 1308238..1309857 | + | 1620 | WP_012117375.1 | peptide ABC transporter substrate-binding protein | - |
| B938_RS06830 () | 1309933..1310880 | + | 948 | WP_161808530.1 | LD-carboxypeptidase | - |
| B938_RS06835 () | 1310887..1311984 | + | 1098 | WP_015239703.1 | dipeptide epimerase | - |
| B938_RS06840 () | 1311981..1312880 | + | 900 | WP_015239704.1 | Gamma-D-glutamyl-L-lysine dipeptidyl-peptidase | VF |
| B938_RS06845 () | 1312884..1313855 | + | 972 | WP_015239705.1 | ATP-binding cassette domain-containing protein | - |
| B938_RS06850 () | 1313883..1314932 | - | 1050 | WP_015239706.1 | lactonase family protein | - |
| B938_RS06855 () | 1315003..1315863 | - | 861 | WP_015239707.1 | dimethylarginine dimethylaminohydrolase family protein | - |
| B938_RS06860 () | 1316053..1316571 | + | 519 | WP_015239708.1 | acyl-CoA thioesterase | - |
| B938_RS06865 () | 1316671..1317216 | + | 546 | WP_007407237.1 | GNAT family N-acetyltransferase | - |
| B938_RS06870 () | 1317404..1317742 | + | 339 | WP_015239709.1 | multidrug efflux SMR transporter | - |
| B938_RS06875 () | 1317742..1318056 | + | 315 | WP_007407235.1 | multidrug efflux SMR transporter | - |
| B938_RS06880 () | 1318131..1319033 | + | 903 | WP_007407234.1 | formyltetrahydrofolate deformylase | - |
| B938_RS06885 () | 1319403..1320515 | + | 1113 | WP_015239710.1 | glutamate 5-kinase | - |
| B938_RS06890 () | 1320512..1321759 | + | 1248 | WP_015239711.1 | glutamate-5-semialdehyde dehydrogenase | - |
| B938_RS06895 () | 1321873..1322298 | + | 426 | WP_007407231.1 | organic hydroperoxide resistance protein | - |
| B938_RS06900 () | 1322326..1322772 | - | 447 | WP_007407230.1 | MarR family transcriptional regulator | - |
| B938_RS06905 () | 1322909..1323319 | + | 411 | WP_003154758.1 | organic hydroperoxide resistance protein | - |
| B938_RS20235 () | 1323597..1323881 | - | 285 | WP_082186551.1 | hypothetical protein | VF |
| B938_RS06915 () | 1324012..1324473 | + | 462 | WP_012117388.1 | hypothetical protein | - |
| B938_RS06920 () | 1324478..1325605 | + | 1128 | WP_015239713.1 | glycosyltransferase | - |
| B938_RS06925 () | 1325626..1326762 | - | 1137 | WP_015239714.1 | hypothetical protein | - |
| B938_RS06930 () | 1327034..1328217 | - | 1184 | Protein_1313 | MFS transporter | - |
| B938_RS06935 () | 1328299..1328970 | + | 672 | Protein_1314 | transcriptional regulator YeiL | - |
| B938_RS06940 () | 1329019..1331307 | - | 2289 | WP_015239716.1 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase | - |
| B938_RS06945 () | 1331685..1332644 | - | 960 | WP_015239717.1 | S8 family peptidase | - |
| B938_RS06950 () | 1332864..1333697 | + | 834 | WP_015239718.1 | STAS domain-containing protein | - |
| B938_RS06955 () | 1333743..1334504 | - | 762 | WP_015239719.1 | energy-coupling factor transporter transmembrane protein EcfT | - |
| B938_RS06960 () | 1334479..1336116 | - | 1638 | WP_015239720.1 | Putative HMP/thiamine import ATP-binding protein YkoD | VF |
| B938_RS06965 () | 1336103..1336702 | - | 600 | WP_007407218.1 | ECF transporter S component | - |
| B938_RS06975 () | 1337144..1338406 | + | 1263 | WP_015239721.1 | Putative sporulation-specific glycosylase YdhD | VF |
| B938_RS20125 () | 1338494..1338631 | + | 138 | WP_003154740.1 | hypothetical protein | - |
| B938_RS06980 () | 1339139..1340494 | + | 1356 | WP_012117400.1 | magnesium transporter | - |
| B938_RS06985 () | 1340531..1340863 | - | 333 | WP_003154734.1 | MerR family transcriptional regulator TnrA | - |
| B938_RS19990 () | 1341058..1341213 | + | 156 | WP_015239722.1 | hypothetical protein | - |
| B938_RS06990 () | 1341302..1341484 | + | 183 | WP_003154731.1 | Fur-regulated basic protein FbpA | - |
| B938_RS06995 () | 1341628..1342092 | + | 465 | WP_007610911.1 | MarR family transcriptional regulator | - |
| B938_RS07000 () | 1342274..1342828 | + | 555 | WP_007407215.1 | hypothetical protein | - |
| B938_RS07005 () | 1342838..1344673 | - | 1836 | WP_015239723.1 | DNA ligase D | - |
| B938_RS07010 () | 1344676..1345557 | - | 882 | WP_015239724.1 | Ku protein | - |
| B938_RS07015 () | 1346169..1346738 | + | 570 | WP_007407212.1 | DedA family protein | - |
| B938_RS07020 () | 1346984..1347766 | + | 783 | WP_015239726.1 | TerC family protein | - |
| B938_RS07025 () | 1348042..1348797 | + | 756 | WP_003154719.1 | RNA polymerase sigma factor SigI | - |
| B938_RS07030 () | 1348794..1349963 | + | 1170 | WP_014417566.1 | anti-sigma factor domain-containing protein | - |
| B938_RS07035 () | 1349970..1350164 | - | 195 | WP_003154717.1 | alpha/beta-type small acid-soluble spore protein | - |
| B938_RS07040 () | 1350300..1351001 | - | 702 | WP_007407208.1 | DUF1836 domain-containing protein | - |
| B938_RS07045 () | 1351150..1352043 | + | 894 | WP_007407207.1 | protease HtpX | - |
| B938_RS07050 () | 1352202..1353554 | + | 1353 | WP_015239728.1 | TrkH family potassium uptake protein | - |
| B938_RS07055 () | 1353649..1354323 | + | 675 | WP_041482012.1 | DUF421 domain-containing protein | - |
| B938_RS19995 () | 1354325..1354495 | + | 171 | WP_007610936.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|