MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 139429 bp
Accession: NC_018658 Location: 793243..932671 Organism: Escherichia coli O104:H4 str. 2011C-3493 Replicon: chromosome
Accession: NC_018658 Location: 793243..932671 Organism: Escherichia coli O104:H4 str. 2011C-3493 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O3K_RS03835 () | 789693..791912 | + | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| O3K_RS03840 () | 791955..792212 | - | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| O3K_RS03845 () | 792263..793189 | - | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| O3K_RS03850 () | 793389..794216 | - | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| O3K_RS03855 () | 794321..795484 | - | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| O3K_RS03860 () | 795678..796577 | + | 900 | WP_024174618.1 | DNA-binding transcriptional regulator YqhC | - |
| O3K_RS03865 () | 796617..797276 | - | 660 | WP_000268419.1 | DedA family protein | - |
| O3K_RS03870 () | 797416..798603 | - | 1188 | WP_001315867.1 | cystathionine beta-lyase | - |
| O3K_RS03875 () | 798855..799589 | + | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| O3K_RS03880 () | 799596..800021 | + | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| O3K_RS03885 () | 800060..800944 | - | 885 | WP_000018758.1 | putative oxidoreductase YghA | VF |
| O3K_RS03890 () | 801135..801629 | + | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| O3K_RS03895 () | 801669..802709 | - | 1041 | WP_000262151.1 | L-glyceraldehyde 3-phosphate reductase | - |
| O3K_RS03900 () | 802866..803753 | + | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| O3K_RS03905 () | 803872..804159 | + | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| O3K_RS03910 () | 804348..805466 | + | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| O3K_RS03915 () | 805469..806455 | + | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| O3K_RS03920 () | 806445..807623 | + | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| O3K_RS03925 () | 807620..809323 | + | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| O3K_RS03930 () | 809323..809817 | + | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| O3K_RS03935 () | 809810..810298 | + | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| O3K_RS03940 () | 810291..810632 | + | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| O3K_RS03945 () | 810645..810893 | + | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| O3K_RS03950 () | 811015..811995 | - | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| O3K_RS03955 () | 812295..813161 | - | 867 | WP_001387074.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| O3K_RS03960 () | 813366..815225 | + | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| O3K_RS03965 () | 815517..817016 | + | 1500 | WP_000933258.1 | inorganic phosphate transporter PitB | - |
| O3K_RS03970 () | 817065..817757 | - | 693 | WP_001190780.1 | thymidylate kinase | - |
| O3K_RS03975 () | 817931..818644 | + | 714 | WP_001076097.1 | thymidylate kinase | - |
| O3K_RS03980 () | 818676..819434 | + | 759 | WP_000339532.1 | hypothetical protein | - |
| O3K_RS03985 () | 819480..820829 | + | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| O3K_RS03990 () | 820829..821653 | + | 825 | WP_000984978.1 | hypothetical protein | - |
| O3K_RS03995 () | 821665..822225 | + | 561 | WP_001299422.1 | YtfJ family protein | - |
| O3K_RS04000 () | 822256..823326 | + | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| O3K_RS04005 () | 823323..824402 | + | 1080 | WP_001387073.1 | LPS export ABC transporter permease LptG | - |
| O3K_RS04010 () | 824437..825609 | - | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| O3K_RS04015 () | 825609..825857 | - | 249 | WP_000248097.1 | acyl carrier protein | - |
| O3K_RS04020 () | 825889..826803 | - | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| O3K_RS04025 () | 826800..828521 | - | 1722 | WP_001390306.1 | 4-hydroxyphenylalkanoate adenylyltransferase | VF |
| O3K_RS04030 () | 828892..830034 | + | 1143 | WP_000388786.1 | DNA-binding protein | - |
| O3K_RS04035 () | 830041..830805 | - | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| O3K_RS04040 () | 831056..832555 | + | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| O3K_RS04045 () | 832555..833607 | + | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| O3K_RS04050 () | 833618..834841 | + | 1224 | WP_001194680.1 | glycolate oxidase subunit GlcF | - |
| O3K_RS04055 () | 834846..835250 | + | 405 | WP_000853256.1 | protein GlcG | - |
| O3K_RS04060 () | 835272..837443 | + | 2172 | WP_000084080.1 | malate synthase G | - |
| O3K_RS04065 () | 837799..839481 | + | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| O3K_RS04070 () | 839967..844532 | + | 4566 | WP_001034494.1 | hypothetical protein | VF |
| O3K_RS04075 () | 844672..845481 | + | 810 | WP_001365924.1 | Leader peptidase PppA | VF |
| O3K_RS04080 () | 845547..845957 | + | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| O3K_RS04085 () | 845975..846934 | + | 960 | WP_000135063.1 | Type II secretion system protein C | VF |
| O3K_RS04090 () | 846964..849024 | + | 2061 | WP_000498829.1 | Type II secretion system protein D | VF |
| O3K_RS04095 () | 849024..850517 | + | 1494 | WP_000249348.1 | Type II secretion system protein E | VF |
| O3K_RS04100 () | 850517..851740 | + | 1224 | WP_001173453.1 | Type II secretion system protein F | VF |
| O3K_RS04105 () | 851757..852212 | + | 456 | WP_001087296.1 | Type II secretion system protein G | VF |
| O3K_RS04110 () | 852216..852779 | + | 564 | WP_001115140.1 | Type II secretion system protein H | VF |
| O3K_RS04115 () | 852776..853147 | + | 372 | WP_000820125.1 | Type II secretion system protein I | VF |
| O3K_RS04120 () | 853144..853743 | + | 600 | WP_001255040.1 | Type II secretion system protein J | VF |
| O3K_RS04125 () | 853746..854723 | + | 978 | WP_000633238.1 | Putative type II secretion system protein K | VF |
| O3K_RS04130 () | 854720..855898 | + | 1179 | WP_000094962.1 | Type II secretion system protein L | VF |
| O3K_RS04135 () | 855900..856436 | + | 537 | WP_000942795.1 | Type II secretion system protein M | VF |
| O3K_RS04140 () | 856717..857559 | - | 843 | WP_001280493.1 | DUF4942 domain-containing protein | - |
| O3K_RS04145 () | 857644..857841 | - | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| O3K_RS04150 () | 857869..858066 | - | 198 | Protein_815 | hypothetical protein | - |
| O3K_RS04155 () | 858063..858440 | - | 378 | WP_001094429.1 | TA system toxin CbtA family protein | Toxin Detail |
| O3K_RS04160 () | 858487..858864 | - | 378 | WP_001285616.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| O3K_RS04165 () | 858944..859165 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| O3K_RS04170 () | 859252..859728 | - | 477 | WP_001388380.1 | RadC family protein | - |
| O3K_RS04175 () | 859744..860217 | - | 474 | WP_000855081.1 | antirestriction protein | - |
| O3K_RS04180 () | 860518..861336 | - | 819 | WP_001234603.1 | DUF945 domain-containing protein | - |
| O3K_RS04185 () | 861436..861669 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| O3K_RS04190 () | 861748..862203 | - | 456 | WP_000581502.1 | hypothetical protein | - |
| O3K_RS04195 () | 862279..864795 | - | 2517 | WP_001387066.1 | membrane protein | - |
| O3K_RS04200 () | 864916..868035 | - | 3120 | WP_000820379.1 | autotransporter adhesin Ag43 | - |
| O3K_RS04205 () | 868369..869241 | - | 873 | WP_001069724.1 | GTPase family protein | - |
| O3K_RS04210 () | 869351..870370 | - | 1020 | WP_001388379.1 | hypothetical protein | - |
| O3K_RS04215 () | 871549..871656 | - | 108 | Protein_828 | IS1 family transposase | - |
| O3K_RS04220 () | 871865..872437 | - | 573 | WP_001170560.1 | hypothetical protein | - |
| O3K_RS04225 () | 872523..872729 | - | 207 | WP_001095912.1 | AlpA family transcriptional regulator | - |
| O3K_RS04230 () | 873428..873640 | + | 213 | WP_000453331.1 | hemolysin expression modulator Hha | - |
| O3K_RS26565 () | 873880..874053 | - | 174 | WP_001387062.1 | hypothetical protein | - |
| O3K_RS04235 () | 874257..874826 | + | 570 | WP_000220727.1 | inovirus Gp2 family protein | - |
| O3K_RS04240 () | 874864..875022 | + | 159 | WP_000493525.1 | hypothetical protein | - |
| O3K_RS04245 () | 874994..875377 | + | 384 | WP_000271022.1 | hypothetical protein | - |
| O3K_RS04250 () | 875367..875786 | + | 420 | WP_001387059.1 | hypothetical protein | - |
| O3K_RS04255 () | 875792..875974 | + | 183 | WP_001216313.1 | hypothetical protein | - |
| O3K_RS04260 () | 876095..876718 | + | 624 | WP_001260266.1 | hypothetical protein | - |
| O3K_RS04265 () | 876814..877047 | + | 234 | WP_000124181.1 | hypothetical protein | - |
| O3K_RS04270 () | 877100..877291 | - | 192 | WP_001287796.1 | DUF4222 domain-containing protein | - |
| O3K_RS04275 () | 877798..878295 | + | 498 | WP_000098939.1 | hypothetical protein | VF |
| O3K_RS04280 () | 878317..879678 | + | 1362 | WP_000930193.1 | hypothetical protein | VF |
| O3K_RS04285 () | 879780..881024 | + | 1245 | WP_000897032.1 | GIY-YIG nuclease family protein | - |
| O3K_RS04290 () | 881260..883005 | + | 1746 | WP_001390303.1 | AAA family ATPase | - |
| O3K_RS04295 () | 883070..883375 | + | 306 | WP_001420595.1 | hypothetical protein | - |
| O3K_RS04300 () | 883490..883657 | + | 168 | Protein_846 | transcriptional regulator | - |
| O3K_RS04305 () | 883736..884005 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| O3K_RS04310 () | 884026..884670 | + | 645 | WP_001387055.1 | hypothetical protein | - |
| O3K_RS04315 () | 884736..885059 | + | 324 | WP_001387054.1 | hypothetical protein | - |
| O3K_RS04320 () | 885090..885669 | - | 580 | Protein_850 | transposase family protein | - |
| O3K_RS04325 () | 885879..886265 | + | 387 | WP_014966195.1 | hypothetical protein | - |
| O3K_RS04330 () | 886243..886368 | + | 126 | WP_001420591.1 | hypothetical protein | - |
| O3K_RS04335 () | 886374..887390 | - | 1017 | Protein_853 | IS630 family transposase | - |
| O3K_RS04340 () | 887786..888262 | + | 477 | WP_000072549.1 | hypothetical protein | VF |
| O3K_RS04345 () | 888265..889743 | + | 1479 | WP_000215053.1 | hypothetical protein | VF |
| O3K_RS04350 () | 889753..890259 | + | 507 | WP_000233190.1 | type VI secretion system protein AaiC/Hcp2 | - |
| O3K_RS04355 () | 890269..890691 | + | 423 | WP_000555547.1 | hypothetical protein | - |
| O3K_RS04360 () | 890684..892486 | + | 1803 | WP_001390300.1 | type VI secretion system baseplate subunit TssF | - |
| O3K_RS04365 () | 892477..893409 | + | 933 | WP_001173975.1 | type VI secretion system baseplate subunit TssG | - |
| O3K_RS04370 () | 893422..895404 | + | 1983 | WP_000198270.1 | type VI secretion system tip protein VgrG | - |
| O3K_RS04375 () | 895415..895882 | + | 468 | WP_000005080.1 | hypothetical protein | - |
| O3K_RS04380 () | 895892..896191 | + | 300 | WP_001390299.1 | PAAR domain-containing protein | - |
| O3K_RS04385 () | 896195..897271 | + | 1077 | WP_001033155.1 | hypothetical protein | VF |
| O3K_RS04390 () | 897279..897830 | + | 552 | WP_000152746.1 | type VI secretion lipoprotein TssJ | - |
| O3K_RS04395 () | 897849..899261 | + | 1413 | WP_001154665.1 | type VI secretion system baseplate subunit TssK | - |
| O3K_RS04400 () | 899600..900190 | + | 591 | WP_001028113.1 | hypothetical protein | VF |
| O3K_RS04405 () | 900196..903600 | + | 3405 | WP_000914956.1 | type VI secretion protein | - |
| O3K_RS04410 () | 903604..906153 | + | 2550 | WP_000029846.1 | Protein ClpV1 | VF |
| O3K_RS04415 () | 906350..907087 | + | 738 | Protein_869 | IS3 family transposase IS1203 | Transposase |
| O3K_RS04420 () | 907760..909267 | + | 1508 | Protein_870 | group II intron reverse transcriptase/maturase | - |
| O3K_RS04425 () | 909357..909830 | + | 474 | Protein_871 | IS3 family transposase IS629 | Transposase |
| O3K_RS26650 () | 911588..912154 | + | 567 | WP_000587872.1 | hypothetical protein | - |
| O3K_RS04435 () | 912219..912499 | + | 281 | Protein_873 | transposase | - |
| O3K_RS04440 () | 912633..913787 | + | 1155 | WP_000359994.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| O3K_RS04445 () | 914653..914823 | - | 171 | Protein_875 | ATP-dependent helicase | - |
| O3K_RS04450 () | 914853..915041 | - | 189 | Protein_876 | IS66 family transposase IS682 | Transposase |
| O3K_RS04455 () | 915102..916234 | + | 1133 | Protein_877 | IS110 family transposase ISEc45 | Transposase |
| O3K_RS04460 () | 916274..916636 | + | 363 | WP_077577697.1 | IS3 family transposase | - |
| O3K_RS04465 () | 916640..916783 | + | 144 | Protein_879 | IS3 family transposase | - |
| O3K_RS04470 () | 916969..917547 | - | 579 | Protein_880 | IS66 family transposase ISEc43 | Transposase |
| O3K_RS04475 () | 917432..918556 | - | 1125 | WP_001390760.1 | IS21 family transposase IS100kyp | Transposase |
| O3K_RS04480 () | 918644..919286 | + | 643 | Protein_882 | IS66 family transposase ISEc8 | Transposase |
| O3K_RS04485 () | 919325..919567 | + | 243 | Protein_883 | IS256 family transposase IS1414 | Transposase |
| O3K_RS04490 () | 919718..923836 | - | 4119 | WP_001045650.1 | Serine protease pic autotransporter | VF |
| O3K_RS04495 () | 924001..924474 | - | 474 | Protein_885 | IS3 family transposase IS629 | Transposase |
| O3K_RS04500 () | 924564..926071 | - | 1508 | Protein_886 | group II intron reverse transcriptase/maturase | - |
| O3K_RS04505 () | 926744..927169 | - | 426 | Protein_887 | IS3 family transposase | - |
| O3K_RS04515 () | 927234..928385 | + | 1152 | WP_001254936.1 | IS30 family transposase IS30D | Transposase |
| O3K_RS04520 () | 928398..928655 | - | 258 | Protein_889 | IS3 family transposase IS911 | Transposase |
| O3K_RS04525 () | 928725..929018 | - | 294 | WP_001091149.1 | hypothetical protein | - |
| O3K_RS04530 () | 929107..931977 | - | 2871 | WP_000081335.1 | DEAD/DEAH box helicase family protein | - |
| O3K_RS04535 () | 931980..933608 | - | 1629 | WP_000105162.1 | site-specific DNA-methyltransferase | - |
| O3K_RS04540 () | 933618..936005 | - | 2388 | WP_000126413.1 | S8 family peptidase | - |
| O3K_RS04545 () | 936015..936995 | - | 981 | WP_001273465.1 | ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|