MGE detailed information
MGE type: Conjugative plasmid MGE length: 102535 bp
Accession: NC_017665 Location: 1..102535 Organism: Escherichia coli W Replicon: plasmid pRK1
Accession: NC_017665 Location: 1..102535 Organism: Escherichia coli W Replicon: plasmid pRK1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WFL_RS24460 () | 1473..1907 | + | 435 | WP_000218859.1 | hypothetical protein | - |
| WFL_RS24465 () | 2001..2267 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| WFL_RS24470 () | 2332..3222 | + | 891 | WP_000038398.1 | Recombination-promoting nuclease RpnA | VF |
| WFL_RS27205 () | 3222..3443 | + | 222 | WP_014358130.1 | hypothetical protein | - |
| WFL_RS24475 () | 3474..3725 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| WFL_RS27860 () | 3759..3956 | - | 198 | WP_001161109.1 | hypothetical protein | - |
| WFL_RS24485 () | 4307..5155 | + | 849 | WP_001077028.1 | DUF4942 domain-containing protein | - |
| WFL_RS24490 () | 5241..5576 | - | 336 | WP_000157097.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| WFL_RS24495 () | 5810..6142 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| WFL_RS24500 () | 6153..8852 | + | 2700 | WP_001350015.1 | Protein TraI | Relaxase |
| WFL_RS24505 () | 8889..11180 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| WFL_RS24510 () | 11173..12243 | - | 1071 | WP_000151587.1 | IncI1-type conjugal transfer protein TrbB | - |
| WFL_RS24515 () | 12262..13470 | - | 1209 | WP_000121272.1 | IncI1-type conjugal transfer protein TrbA | - |
| WFL_RS24520 () | 13732..14640 | - | 909 | WP_000055084.1 | hypothetical protein | - |
| WFL_RS27865 () | 15432..15608 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| WFL_RS24540 () | 15818..16009 | - | 192 | WP_001147208.1 | hemolysin expression modulator Hha | - |
| WFL_RS24545 () | 16075..16689 | - | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| WFL_RS24550 () | 16765..18933 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| WFL_RS24555 () | 19030..19614 | - | 585 | WP_001037990.1 | IncI1-type conjugal transfer protein TraX | - |
| WFL_RS24560 () | 19643..20845 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| WFL_RS24565 () | 20812..21426 | - | 615 | WP_000337400.1 | IncI1-type conjugal transfer protein TraV | - |
| WFL_RS24570 () | 21426..24470 | - | 3045 | WP_001024787.1 | IncI1-type conjugal transfer protein TraU | - |
| WFL_RS24575 () | 24560..25360 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| WFL_RS24580 () | 25344..25532 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| WFL_RS24585 () | 25596..26000 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| WFL_RS24590 () | 26051..26578 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| WFL_RS24595 () | 26578..27282 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| WFL_RS24600 () | 27282..28571 | - | 1290 | WP_001271991.1 | conjugal transfer protein TraO | - |
| WFL_RS24605 () | 28574..29557 | - | 984 | WP_001191878.1 | hypothetical protein | VF |
| WFL_RS24610 () | 29568..30260 | - | 693 | WP_000138549.1 | DotI/IcmL family type IV secretion protein | - |
| WFL_RS24615 () | 30257..30604 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| WFL_RS24620 () | 30622..34389 | - | 3768 | WP_001141538.1 | hypothetical protein | - |
| WFL_RS24625 () | 34479..35030 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| WFL_RS26630 () | 35045..35335 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| WFL_RS24630 () | 35332..36480 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| WFL_RS24635 () | 36477..37295 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| WFL_RS24640 () | 37292..37750 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| WFL_RS24645 () | 38145..38729 | - | 585 | WP_000977526.1 | histidine phosphatase family protein | - |
| WFL_RS24650 () | 38789..39991 | - | 1203 | WP_000976350.1 | conjugal transfer protein TraF | - |
| WFL_RS24655 () | 40077..40901 | - | 825 | WP_001238943.1 | hypothetical protein | - |
| WFL_RS27215 () | 41109..41234 | + | 126 | Protein_41 | transposase | - |
| WFL_RS24660 () | 41291..42583 | - | 1293 | WP_001350014.1 | hypothetical protein | VF |
| WFL_RS24665 () | 42583..43239 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| WFL_RS24670 () | 43224..43784 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| WFL_RS24675 () | 43794..44408 | - | 615 | WP_000908226.1 | hypothetical protein | VF |
| WFL_RS24680 () | 44425..45510 | - | 1086 | WP_001208804.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| WFL_RS24685 () | 45523..47076 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| WFL_RS24690 () | 47087..47539 | - | 453 | WP_001236383.1 | hypothetical protein | VF |
| WFL_RS24695 () | 47526..48821 | - | 1296 | WP_000752792.1 | type 4b pilus protein PilO2 | - |
| WFL_RS24700 () | 48814..50496 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| WFL_RS24705 () | 50510..50947 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| WFL_RS24710 () | 50947..52014 | - | 1068 | WP_001350013.1 | hypothetical protein | VF |
| WFL_RS24715 () | 53028..53282 | - | 255 | WP_001113622.1 | PilI type IV pilus biogenesis protein | - |
| WFL_RS24720 () | 53446..54129 | - | 684 | WP_000213860.1 | hypothetical protein | - |
| WFL_RS24725 () | 54383..54916 | - | 534 | WP_001350011.1 | transcription termination factor NusG | - |
| WFL_RS24730 () | 55358..55645 | - | 288 | WP_000074853.1 | hypothetical protein | - |
| WFL_RS25115 () | 55563..55826 | - | 264 | Protein_57 | ash family protein | - |
| WFL_RS24745 () | 56798..57829 | + | 1032 | WP_000907868.1 | replication initiation protein | - |
| WFL_RS24750 () | 58733..59017 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| WFL_RS24755 () | 59017..59292 | + | 276 | WP_000421267.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| WFL_RS24760 () | 59398..59685 | + | 288 | WP_001105072.1 | hypothetical protein | - |
| WFL_RS27870 () | 59876..60142 | - | 267 | WP_000627834.1 | hypothetical protein | - |
| WFL_RS24770 () | 60142..60636 | - | 495 | WP_001350009.1 | hypothetical protein | - |
| WFL_RS24775 () | 60692..61294 | - | 603 | WP_000517697.1 | hypothetical protein | - |
| WFL_RS24780 () | 61648..62994 | + | 1347 | WP_001132027.1 | hypothetical protein | - |
| WFL_RS24785 () | 63272..63958 | + | 687 | Protein_66 | colicin-Ia domain protein | - |
| WFL_RS24790 () | 64147..65334 | - | 1188 | WP_001350007.1 | IS91 family transposase ISEc37 | Transposase |
| WFL_RS24795 () | 65334..65699 | - | 366 | WP_000124136.1 | hypothetical protein | - |
| WFL_RS24800 () | 66413..66709 | + | 297 | WP_049789836.1 | Major pilu subunit operon regulatory protein PapB | VF |
| WFL_RS24805 () | 66751..67293 | + | 543 | WP_001350006.1 | hypothetical protein | VF |
| WFL_RS24810 () | 67350..69752 | + | 2403 | WP_000466170.1 | Outer membrane usher protein YraJ | VF |
| WFL_RS24815 () | 69745..70521 | + | 777 | WP_000044490.1 | Chaperone protein FaeE | VF |
| WFL_RS24820 () | 70556..71047 | + | 492 | WP_000753462.1 | hypothetical protein | VF |
| WFL_RS24825 () | 71284..72141 | + | 858 | WP_000751748.1 | K88 fimbrial protein AD | VF |
| WFL_RS24830 () | 72237..72707 | + | 471 | WP_001123022.1 | hypothetical protein | VF |
| WFL_RS24835 () | 72929..74521 | + | 1593 | WP_001350003.1 | hypothetical protein | - |
| WFL_RS24840 () | 74556..75680 | + | 1125 | WP_000386705.1 | DUF4238 domain-containing protein | - |
| WFL_RS24845 () | 75680..75970 | + | 291 | WP_000648897.1 | hypothetical protein | - |
| WFL_RS24855 () | 76473..76802 | + | 330 | WP_001137792.1 | IS66 family transposase ISEc49 | Transposase |
| WFL_RS24860 () | 76789..77169 | + | 381 | WP_000957247.1 | IS66 family transposase ISEc49 | Transposase |
| WFL_RS24865 () | 77212..78795 | + | 1584 | WP_000355318.1 | IS66 family transposase ISEc49 | Transposase |
| WFL_RS27875 () | 78809..78952 | - | 144 | WP_000877738.1 | hypothetical protein | - |
| WFL_RS24870 () | 79324..80325 | + | 1002 | WP_000785695.1 | DUF4238 domain-containing protein | - |
| WFL_RS24875 () | 80499..80843 | - | 345 | WP_000792769.1 | hypothetical protein | - |
| WFL_RS24885 () | 81341..81595 | - | 255 | WP_000678528.1 | hypothetical protein | - |
| WFL_RS24890 () | 81645..82571 | - | 927 | WP_001290414.1 | hypothetical protein | - |
| WFL_RS24895 () | 83104..83454 | + | 351 | WP_000493379.1 | hypothetical protein | - |
| WFL_RS24900 () | 83513..84334 | + | 822 | WP_001316850.1 | hypothetical protein | - |
| WFL_RS24905 () | 84334..85113 | + | 780 | WP_000147282.1 | site-specific integrase | - |
| WFL_RS24910 () | 85294..85938 | + | 645 | WP_001144036.1 | ParA family protein | - |
| WFL_RS24915 () | 86025..86333 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| WFL_RS24920 () | 86747..87727 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| WFL_RS24925 () | 87720..88136 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| WFL_RS24930 () | 88138..89412 | - | 1275 | WP_000457498.1 | Y-family DNA polymerase | - |
| WFL_RS24935 () | 89412..89849 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| WFL_RS24940 () | 89846..90094 | - | 249 | WP_000618103.1 | DinI-like family protein | - |
| WFL_RS24945 () | 90512..91414 | + | 903 | WP_125075260.1 | DUF1281 domain-containing protein | - |
| WFL_RS27235 () | 91411..91722 | + | 312 | WP_014640311.1 | hypothetical protein | - |
| WFL_RS24955 () | 91798..92481 | + | 684 | WP_000086148.1 | DNA methylase | - |
| WFL_RS24960 () | 92482..92703 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| WFL_RS24965 () | 92717..93151 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| WFL_RS27880 () | 93197..93973 | + | 777 | WP_001005028.1 | hypothetical protein | - |
| WFL_RS27245 () | 94507..94809 | + | 303 | WP_014653258.1 | antirestriction protein | - |
| WFL_RS24980 () | 94856..95278 | + | 423 | WP_000271691.1 | DUF1380 family protein | - |
| WFL_RS24985 () | 95275..95466 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| WFL_RS27250 () | 95537..95851 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| WFL_RS24995 () | 96235..96762 | + | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| WFL_RS25000 () | 96819..97052 | + | 234 | WP_001042947.1 | DUF905 domain-containing protein | - |
| WFL_RS25005 () | 97114..99072 | + | 1959 | WP_000117798.1 | ParB/RepB/Spo0J family partition protein | - |
| WFL_RS25010 () | 99127..99561 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| WFL_RS25015 () | 99558..100277 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| WFL_RS25020 () | 100274..100870 | + | 597 | WP_000978014.1 | hypothetical protein | - |
| WFL_RS25030 () | 101333..101833 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|